BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0007.p (269 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769476.1| ABC transporter permease protein [Bradyrhizobiu... 493 e-138 ref|YP_001525268.1| ABC transporter permease [Azorhizobium cauli... 354 6e-96 ref|YP_002943778.1| binding-protein-dependent transport systems ... 333 1e-89 ref|YP_004156241.1| binding-protein-dependent transport systems ... 327 9e-88 ref|YP_995421.1| binding-protein-dependent transport systems inn... 323 2e-86 >ref|NP_769476.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48101.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 269 Score = 493 bits (1270), Expect = e-138, Method: Compositional matrix adjust. Identities = 249/269 (92%), Positives = 261/269 (97%) Query: 1 VAEAKSPSGLSKVLNAAWVRPFLFLVVIVAAWDLAIRLFHIPAYQIPSPGDVVAVLWSDW 60 +AE K S +SK+LNAAWVRPFLFLV IV AWDLAIRLF IPAYQIPSPGDV+AVL ++W Sbjct: 1 MAELKPQSAVSKMLNAAWVRPFLFLVFIVIAWDLAIRLFRIPAYQIPSPGDVIAVLRTEW 60 Query: 61 PELLRQSWPTTYATICGFLLSALFGIPVAMLIAGSKTVESYVYPLLVFSQSVPKIAIAPL 120 PELLRQSWPTTYAT+CGFLLSALFGIPVAMLIAGSKTVESYVYPLLVFSQSVPKIAIAPL Sbjct: 61 PELLRQSWPTTYATVCGFLLSALFGIPVAMLIAGSKTVESYVYPLLVFSQSVPKIAIAPL 120 Query: 121 FVVWFGFGIIPKVISAFLLGFFPVVVSAVQGFKSVDPDMVDLARAMQGSRFQVFRAVNLP 180 FVVWFGFGIIPKVISAFLLGFFPVVVSAVQGFKSVDPDMVDLARAMQGSRFQVFRAVNLP Sbjct: 121 FVVWFGFGIIPKVISAFLLGFFPVVVSAVQGFKSVDPDMVDLARAMQGSRFQVFRAVNLP 180 Query: 181 HAMPAIFSGLKVSVTLAVVGAVVGEFVGSNSGIGYVMQRSIGTFDLPTMFAALVILALLG 240 HA+PAIFSGLKVSVTLAVVGAVVGEFVGSNSGIGYVMQRSIGTFDLPTMFAALVILALLG Sbjct: 181 HALPAIFSGLKVSVTLAVVGAVVGEFVGSNSGIGYVMQRSIGTFDLPTMFAALVILALLG 240 Query: 241 VILFWIVDRIERLVIPWHVSQRDDIIFAS 269 V+LFWIVDRIE+LVIPWHVSQR+D+IFAS Sbjct: 241 VVLFWIVDRIEKLVIPWHVSQREDVIFAS 269 >ref|YP_001525268.1| ABC transporter permease [Azorhizobium caulinodans ORS 571] dbj|BAF88350.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 269 Score = 354 bits (909), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 172/251 (68%), Positives = 213/251 (84%) Query: 15 NAAWVRPFLFLVVIVAAWDLAIRLFHIPAYQIPSPGDVVAVLWSDWPELLRQSWPTTYAT 74 N+ V+P LVV++A WD+++RLF IP Y IP+P DV ++ LL+++ PTT AT Sbjct: 15 NSPSVKPVALLVVLIALWDVSVRLFKIPPYLIPAPWDVFMAFRTEGGMLLQEAIPTTIAT 74 Query: 75 ICGFLLSALFGIPVAMLIAGSKTVESYVYPLLVFSQSVPKIAIAPLFVVWFGFGIIPKVI 134 + GF LSAL GIP+AM+IAGS+TVE Y+YPLLVFSQS+PK+AIAPLFVVWFGFG++PKVI Sbjct: 75 VSGFALSALIGIPLAMMIAGSRTVEGYLYPLLVFSQSIPKVAIAPLFVVWFGFGMVPKVI 134 Query: 135 SAFLLGFFPVVVSAVQGFKSVDPDMVDLARAMQGSRFQVFRAVNLPHAMPAIFSGLKVSV 194 SAFLLG FPV+V+ VQGFKSV+ DM DLARAM+ S+ Q F V+LPHAMPAIF+GLKVSV Sbjct: 135 SAFLLGVFPVIVAGVQGFKSVEGDMRDLARAMKASKLQTFAMVSLPHAMPAIFAGLKVSV 194 Query: 195 TLAVVGAVVGEFVGSNSGIGYVMQRSIGTFDLPTMFAALVILALLGVILFWIVDRIERLV 254 TLAVVGAVVGEFVG+NSG+G+V+QRSIG F+LPTMFAAL++LAL+GV+LFW+VD IERL Sbjct: 195 TLAVVGAVVGEFVGANSGLGFVLQRSIGNFELPTMFAALILLALIGVVLFWVVDVIERLC 254 Query: 255 IPWHVSQRDDI 265 +PWH SQR D+ Sbjct: 255 VPWHASQRQDV 265 >ref|YP_002943778.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] gb|ACS18512.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus S110] Length = 257 Score = 333 bits (855), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 170/232 (73%), Positives = 195/232 (84%) Query: 32 WDLAIRLFHIPAYQIPSPGDVVAVLWSDWPELLRQSWPTTYATICGFLLSALFGIPVAML 91 WD+AIRLF IPAY IP P +VV L ++WP LL +SW TT AT+ GF L+ L GIP+AM+ Sbjct: 24 WDVAIRLFRIPAYLIPPPWEVVKQLVAEWPRLLAESWKTTLATLGGFGLTILIGIPIAMV 83 Query: 92 IAGSKTVESYVYPLLVFSQSVPKIAIAPLFVVWFGFGIIPKVISAFLLGFFPVVVSAVQG 151 IA S+ VESYVYPLLVFSQS+PK+AIAPLFVVWFGFGI PKVISAFLLGFFPVVVS V G Sbjct: 84 IAYSRLVESYVYPLLVFSQSIPKVAIAPLFVVWFGFGIFPKVISAFLLGFFPVVVSTVMG 143 Query: 152 FKSVDPDMVDLARAMQGSRFQVFRAVNLPHAMPAIFSGLKVSVTLAVVGAVVGEFVGSNS 211 FKSV+PDM+DLAR+M SR Q F ++LP AMPAIFSGLKVSVTLAVVGAVVGEFVGSNS Sbjct: 144 FKSVEPDMLDLARSMGASRLQTFFKISLPQAMPAIFSGLKVSVTLAVVGAVVGEFVGSNS 203 Query: 212 GIGYVMQRSIGTFDLPTMFAALVILALLGVILFWIVDRIERLVIPWHVSQRD 263 GIGYV+Q + G FDLP MFAALV+L+ +GVILF VD +ER++IPWH SQR Sbjct: 204 GIGYVLQVANGNFDLPLMFAALVVLSSIGVILFVAVDIVERVMIPWHASQRH 255 >ref|YP_004156241.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] gb|ADU38130.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] Length = 257 Score = 327 bits (839), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 166/228 (72%), Positives = 192/228 (84%) Query: 36 IRLFHIPAYQIPSPGDVVAVLWSDWPELLRQSWPTTYATICGFLLSALFGIPVAMLIAGS 95 IRLF IPAY IP P +VV L ++WP LL +SW TT AT+ GF L+ L GIP+AM+IA S Sbjct: 28 IRLFKIPAYLIPPPWEVVKQLVAEWPRLLSESWKTTLATLGGFGLTILIGIPIAMVIAYS 87 Query: 96 KTVESYVYPLLVFSQSVPKIAIAPLFVVWFGFGIIPKVISAFLLGFFPVVVSAVQGFKSV 155 + VESYVYPLLVFSQS+PK+AIAPLFVVWFGFGI+PKVISAFLLGFFPVVVS V GFKSV Sbjct: 88 RLVESYVYPLLVFSQSIPKVAIAPLFVVWFGFGILPKVISAFLLGFFPVVVSTVMGFKSV 147 Query: 156 DPDMVDLARAMQGSRFQVFRAVNLPHAMPAIFSGLKVSVTLAVVGAVVGEFVGSNSGIGY 215 +PDM+DLAR+M SR Q F ++LP A+PAIFSGLKVSVTLAVVGAVVGEFVGSNSGIGY Sbjct: 148 EPDMLDLARSMGASRLQTFFKISLPQALPAIFSGLKVSVTLAVVGAVVGEFVGSNSGIGY 207 Query: 216 VMQRSIGTFDLPTMFAALVILALLGVILFWIVDRIERLVIPWHVSQRD 263 V+Q + G FDLP MFAALV+L+ +GV+LF VD +ERL+IPWH SQR Sbjct: 208 VLQVANGNFDLPLMFAALVVLSSIGVVLFVAVDLVERLMIPWHASQRH 255 >ref|YP_995421.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] gb|ABM56403.1| binding-protein-dependent transport systems inner membrane component [Verminephrobacter eiseniae EF01-2] Length = 254 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 165/227 (72%), Positives = 190/227 (83%) Query: 36 IRLFHIPAYQIPSPGDVVAVLWSDWPELLRQSWPTTYATICGFLLSALFGIPVAMLIAGS 95 IRLF IPAY IP P +VV ++WP LL +SW TT AT+ GF L+ + GIP+AMLIA S Sbjct: 28 IRLFEIPAYLIPPPWEVVKQFVAEWPRLLSESWKTTLATLGGFGLTIVIGIPIAMLIAYS 87 Query: 96 KTVESYVYPLLVFSQSVPKIAIAPLFVVWFGFGIIPKVISAFLLGFFPVVVSAVQGFKSV 155 + VESYVYPLLVFSQS+PK+AIAPLFVVWFGFGI+PKVISAFLLGFFPVVVS V GFKSV Sbjct: 88 RLVESYVYPLLVFSQSIPKVAIAPLFVVWFGFGILPKVISAFLLGFFPVVVSTVMGFKSV 147 Query: 156 DPDMVDLARAMQGSRFQVFRAVNLPHAMPAIFSGLKVSVTLAVVGAVVGEFVGSNSGIGY 215 +PDM+DLAR+M SR Q F ++LP A+PAIFSGLKVSVTLAVVGAVVGEFVG+NSGIGY Sbjct: 148 EPDMLDLARSMGASRLQTFFKISLPQALPAIFSGLKVSVTLAVVGAVVGEFVGANSGIGY 207 Query: 216 VMQRSIGTFDLPTMFAALVILALLGVILFWIVDRIERLVIPWHVSQR 262 V+Q + G FDLP MFAALV+L+ +GVILF VD IER +IPWH SQR Sbjct: 208 VLQVANGNFDLPLMFAALVVLSSIGVILFVAVDLIERSMIPWHASQR 254