BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0009.0001.p (383 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769480.1| oxidoreductase [Bradyrhizobium japonicum USDA 1... 721 0.0 pdb|3OQB|A Chain A, Crystal Structure Of Putative Oxidoreductase... 702 0.0 ref|YP_001525264.1| oxidoreductase [Azorhizobium caulinodans ORS... 589 e-166 ref|YP_004619492.1| hypothetical protein Rta_23750 [Ramlibacter ... 575 e-162 ref|YP_004156245.1| oxidoreductase domain-containing protein [Va... 561 e-158 >ref|NP_769480.1| oxidoreductase [Bradyrhizobium japonicum USDA 110] dbj|BAC48105.1| oxidoreductase [Bradyrhizobium japonicum USDA 110] Length = 383 Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/381 (88%), Positives = 363/381 (95%) Query: 1 MTTKRLGLIMNGVTGRMGLNQHLIRSIVAIREQGGVQLANGDRVMPDPILVGRDAEKVGA 60 MTT+RLGLIMNGVTGRMGLNQHLIRSIVAIR+QGGV+L NGDR+MPDPILVGR AEKV A Sbjct: 1 MTTQRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEA 60 Query: 61 LAKRYNIERHTTDLDRALADKGDTVFFDAATTQARPSLLTKAINAGKHVYCEKPIATNLE 120 LAKR+NI R TTDLD ALADK DT+FFDAATTQARP LLT+AINAGKHVYCEKPIATN E Sbjct: 61 LAKRFNIARWTTDLDAALADKNDTMFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFE 120 Query: 121 EAVAVVKLANAKGLKHGTVQDKLFLPGLKKLAFLRDSGFFGRMLSVRGEFGYWVFEGGWQ 180 EA+ VVKLAN+KG+KHGTVQDKLFLPGLKK+AFLRDSGFFGR+LSVRGEFGYWVFEGGWQ Sbjct: 121 EALEVVKLANSKGVKHGTVQDKLFLPGLKKIAFLRDSGFFGRILSVRGEFGYWVFEGGWQ 180 Query: 181 EAQRPSWNYRAEDGGGIILDMVCHWRYVLDNLFGEVESVTCLGTTDIPERYDEKGKKYQA 240 EAQRPSWNYR EDGGGIILDMVCHWRYVLDNLFG V+SV C+G TDIPER+DE+GKKY+A Sbjct: 181 EAQRPSWNYRDEDGGGIILDMVCHWRYVLDNLFGNVQSVVCIGNTDIPERFDEQGKKYKA 240 Query: 241 TADDSAYATFRLKGGVIAHINMSWVTRVYRDDLVTFQVDGTHGSAVPGLTDCVIQARQAT 300 TADDSAYATF+L+GGVIAHINMSWVTRVYRDDLVTFQVDGTHGSAV GL+DC+IQARQAT Sbjct: 241 TADDSAYATFQLEGGVIAHINMSWVTRVYRDDLVTFQVDGTHGSAVAGLSDCMIQARQAT 300 Query: 301 PRPVWNPDEKRMHDFYADWQKLPENVVYDNGFKEQWEMFIRHVCEDAPYKYTLLEGAKGV 360 PRPVWNPDEKR+HDFY DWQKLP+NV YDNGFKEQWEMFIRHV EDAPYK+TLLEGAKGV Sbjct: 301 PRPVWNPDEKRLHDFYGDWQKLPDNVSYDNGFKEQWEMFIRHVYEDAPYKFTLLEGAKGV 360 Query: 361 QLAECALKSWKERRWIDVAPI 381 QLAECALKSWKERRWIDVAPI Sbjct: 361 QLAECALKSWKERRWIDVAPI 381 >pdb|3OQB|A Chain A, Crystal Structure Of Putative Oxidoreductase From Bradyrhizobium Japonicum Usda 110 pdb|3OQB|B Chain B, Crystal Structure Of Putative Oxidoreductase From Bradyrhizobium Japonicum Usda 110 pdb|3OQB|C Chain C, Crystal Structure Of Putative Oxidoreductase From Bradyrhizobium Japonicum Usda 110 pdb|3OQB|D Chain D, Crystal Structure Of Putative Oxidoreductase From Bradyrhizobium Japonicum Usda 110 pdb|3OQB|E Chain E, Crystal Structure Of Putative Oxidoreductase From Bradyrhizobium Japonicum Usda 110 pdb|3OQB|F Chain F, Crystal Structure Of Putative Oxidoreductase From Bradyrhizobium Japonicum Usda 110 pdb|3OQB|G Chain G, Crystal Structure Of Putative Oxidoreductase From Bradyrhizobium Japonicum Usda 110 pdb|3OQB|H Chain H, Crystal Structure Of Putative Oxidoreductase From Bradyrhizobium Japonicum Usda 110 Length = 383 Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/381 (87%), Positives = 355/381 (93%) Query: 1 MTTKRLGLIMNGVTGRMGLNQHLIRSIVAIREQGGVQLANGDRVMPDPILVGRDAEKVGA 60 +TT+RLGLI NGVTGR GLNQHLIRSIVAIR+QGGV+L NGDR+ PDPILVGR AEKV A Sbjct: 2 LTTQRLGLIXNGVTGRXGLNQHLIRSIVAIRDQGGVRLKNGDRIXPDPILVGRSAEKVEA 61 Query: 61 LAKRYNIERHTTDLDRALADKGDTVFFDAATTQARPSLLTKAINAGKHVYCEKPIATNLE 120 LAKR+NI R TTDLD ALADK DT FFDAATTQARP LLT+AINAGKHVYCEKPIATN E Sbjct: 62 LAKRFNIARWTTDLDAALADKNDTXFFDAATTQARPGLLTQAINAGKHVYCEKPIATNFE 121 Query: 121 EAVAVVKLANAKGLKHGTVQDKLFLPGLKKLAFLRDSGFFGRMLSVRGEFGYWVFEGGWQ 180 EA+ VVKLAN+KG+KHGTVQDKLFLPGLKK+AFLRDSGFFGR+LSVRGEFGYWVFEGGWQ Sbjct: 122 EALEVVKLANSKGVKHGTVQDKLFLPGLKKIAFLRDSGFFGRILSVRGEFGYWVFEGGWQ 181 Query: 181 EAQRPSWNYRAEDGGGIILDMVCHWRYVLDNLFGEVESVTCLGTTDIPERYDEKGKKYQA 240 EAQRPSWNYR EDGGGIILD VCHWRYVLDNLFG V+SV C+G TDIPER+DE+GKKY+A Sbjct: 182 EAQRPSWNYRDEDGGGIILDXVCHWRYVLDNLFGNVQSVVCIGNTDIPERFDEQGKKYKA 241 Query: 241 TADDSAYATFRLKGGVIAHINMSWVTRVYRDDLVTFQVDGTHGSAVPGLTDCVIQARQAT 300 TADDSAYATF+L+GGVIAHIN SWVTRVYRDDLVTFQVDGTHGSAV GL+DC IQARQAT Sbjct: 242 TADDSAYATFQLEGGVIAHINXSWVTRVYRDDLVTFQVDGTHGSAVAGLSDCXIQARQAT 301 Query: 301 PRPVWNPDEKRMHDFYADWQKLPENVVYDNGFKEQWEMFIRHVCEDAPYKYTLLEGAKGV 360 PRPVWNPDEKR+HDFY DWQKLP+NV YDNGFKEQWE FIRHV EDAPYK+TLLEGAKGV Sbjct: 302 PRPVWNPDEKRLHDFYGDWQKLPDNVSYDNGFKEQWEXFIRHVYEDAPYKFTLLEGAKGV 361 Query: 361 QLAECALKSWKERRWIDVAPI 381 QLAECALKSWKERRWIDVAPI Sbjct: 362 QLAECALKSWKERRWIDVAPI 382 >ref|YP_001525264.1| oxidoreductase [Azorhizobium caulinodans ORS 571] dbj|BAF88346.1| oxidoreductase [Azorhizobium caulinodans ORS 571] Length = 394 Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust. Identities = 288/382 (75%), Positives = 327/382 (85%), Gaps = 1/382 (0%) Query: 1 MTTKRLGLIMNGVTGRMGLNQHLIRSIVAIREQGGVQLANGDRVMPDPILVGRDAEKVGA 60 MT KRLGLIMNG+TGRMGLNQHLIRS+VAIR QGGV L++G +V DPIL+GR+A+KV Sbjct: 1 MTQKRLGLIMNGITGRMGLNQHLIRSVVAIRAQGGVPLSDGTKVQLDPILIGRNADKVEG 60 Query: 61 LAKRYNIERHTTDLDRALADKGDTVFFDAATTQARPSLLTKAINAGKHVYCEKPIATNLE 120 LAK+Y IER TDLD ALAD G+ +FFDAATTQ RP LL KAI AGKHVYCEKPIATNL Sbjct: 61 LAKQYGIERWGTDLDAALADPGNEIFFDAATTQMRPILLEKAIRAGKHVYCEKPIATNLP 120 Query: 121 EAVAVVKLANAKGLKHGTVQDKLFLPGLKKLAFLRDSGFFGRMLSVRGEFGYWVFEGGW- 179 EAV + +LA KG+K+G VQDKLFLPGL+KL LRDSGFFGRM+SVRGEFGYWVFEG W Sbjct: 121 EAVRICRLAEEKGVKNGVVQDKLFLPGLQKLKLLRDSGFFGRMISVRGEFGYWVFEGDWG 180 Query: 180 QEAQRPSWNYRAEDGGGIILDMVCHWRYVLDNLFGEVESVTCLGTTDIPERYDEKGKKYQ 239 Q AQRPSWNYR+++GGG+ILDMVCHWRYVLDNLFGEV+SV+CLG T IP R DE+G+ Y+ Sbjct: 181 QPAQRPSWNYRSQEGGGMILDMVCHWRYVLDNLFGEVKSVSCLGATHIPSRVDERGQPYE 240 Query: 240 ATADDSAYATFRLKGGVIAHINMSWVTRVYRDDLVTFQVDGTHGSAVPGLTDCVIQARQA 299 ATADD+AYATF L+ GVIAHINMSW TRVYRDDLVTFQVDGT GSAV GL+DCV Q+R Sbjct: 241 ATADDAAYATFELQDGVIAHINMSWCTRVYRDDLVTFQVDGTLGSAVAGLSDCVFQSRVG 300 Query: 300 TPRPVWNPDEKRMHDFYADWQKLPENVVYDNGFKEQWEMFIRHVCEDAPYKYTLLEGAKG 359 TPRPVWNPD+K+ DFY WQ +P+ V+DNGFK QWEMFIRHV EDAPY++TL EGAKG Sbjct: 301 TPRPVWNPDQKQTMDFYNHWQPVPDTAVFDNGFKVQWEMFIRHVVEDAPYRFTLREGAKG 360 Query: 360 VQLAECALKSWKERRWIDVAPI 381 VQL ECAL+SWKERRWIDV + Sbjct: 361 VQLVECALQSWKERRWIDVPTL 382 >ref|YP_004619492.1| hypothetical protein Rta_23750 [Ramlibacter tataouinensis TTB310] gb|AEG93473.1| Conserved hypothetical protein [Ramlibacter tataouinensis TTB310] Length = 387 Score = 575 bits (1483), Expect = e-162, Method: Compositional matrix adjust. Identities = 274/387 (70%), Positives = 319/387 (82%), Gaps = 4/387 (1%) Query: 1 MTTKRLGLIMNGVTGRMGLNQHLIRSIVAIREQGGVQLANGDRVMPDPILVGRDAEKVGA 60 M T+RLGLIM+GVTGRMG+NQHLIRSIVAIR QGGV L+NGD+VMPDPIL+GR+AEK+ A Sbjct: 1 MATQRLGLIMHGVTGRMGMNQHLIRSIVAIRHQGGVTLSNGDKVMPDPILIGRNAEKIEA 60 Query: 61 LAKRYNIERHTTDLDRALADKGDTVFFDAATTQARPSLLTKAINAGKHVYCEKPIATNLE 120 LA+ + IER TDLD+ALA++ DTVFFDA TTQ RP+LL +A+ AGKHVYCEKPIAT L Sbjct: 61 LARAHRIERWGTDLDKALANQEDTVFFDAGTTQMRPTLLARALRAGKHVYCEKPIATTLG 120 Query: 121 EAVAVVKLANAKGLKHGTVQDKLFLPGLKKLAFLRDSGFFGRMLSVRGEFGYWVFEGGWQ 180 EAV + K A GLKHG VQDKLFLPGL+KL LR +GFFGRMLSVR EFGYWVFEG Q Sbjct: 121 EAVEIAKTAEKSGLKHGAVQDKLFLPGLRKLDMLRRAGFFGRMLSVRLEFGYWVFEGDLQ 180 Query: 181 EAQRPSWNYRAEDGGGIILDMVCHWRYVLDNLFGEVESVTCLGTTDIPERYDEKGKKYQA 240 QRPSWNYRAEDGGG+ILDM+CHWRYVLDNLFGEV+S++CLG T IP+R+DE GK Y A Sbjct: 181 PIQRPSWNYRAEDGGGMILDMMCHWRYVLDNLFGEVKSISCLGATHIPQRWDEAGKPYPA 240 Query: 241 TADDSAYATFRLKG----GVIAHINMSWVTRVYRDDLVTFQVDGTHGSAVPGLTDCVIQA 296 TADD+AYA L G V+A +NMSW TRV R+DLVTF VDGTHGSAV LT+C Q+ Sbjct: 241 TADDAAYAIAELVGHGGEPVVAQMNMSWATRVNREDLVTFHVDGTHGSAVATLTECKAQS 300 Query: 297 RQATPRPVWNPDEKRMHDFYADWQKLPENVVYDNGFKEQWEMFIRHVCEDAPYKYTLLEG 356 R TPRPVWNPD K+ +F+ WQ++P+ VYDNGFK QWE FIRHV E+APYK+TL EG Sbjct: 301 RVNTPRPVWNPDVKQTMNFFDQWQEVPDTQVYDNGFKIQWEHFIRHVVENAPYKWTLPEG 360 Query: 357 AKGVQLAECALKSWKERRWIDVAPISV 383 AKGVQL E AL+SWKERR++DV P+S+ Sbjct: 361 AKGVQLVEAALQSWKERRFVDVPPLSI 387 >ref|YP_004156245.1| oxidoreductase domain-containing protein [Variovorax paradoxus EPS] gb|ADU38134.1| oxidoreductase domain protein [Variovorax paradoxus EPS] Length = 387 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 278/387 (71%), Positives = 320/387 (82%), Gaps = 4/387 (1%) Query: 1 MTTKRLGLIMNGVTGRMGLNQHLIRSIVAIREQGGVQLANGDRVMPDPILVGRDAEKVGA 60 M T+RLG+IM+GVTGRMG+NQHLIRSI AIR QGGV L+NGD+VMPDPIL+GR+AEK+ A Sbjct: 1 MATQRLGIIMHGVTGRMGMNQHLIRSICAIRAQGGVTLSNGDKVMPDPILIGRNAEKMEA 60 Query: 61 LAKRYNIERHTTDLDRALADKGDTVFFDAATTQARPSLLTKAINAGKHVYCEKPIATNLE 120 LAK +NI R TDLD+AL +K DT+FFDA TTQ RP+LL KAI AGKHVYCEKPIATNL Sbjct: 61 LAKAHNIARWGTDLDKALENKDDTIFFDAGTTQMRPTLLAKAIRAGKHVYCEKPIATNLN 120 Query: 121 EAVAVVKLANAKGLKHGTVQDKLFLPGLKKLAFLRDSGFFGRMLSVRGEFGYWVFEGGWQ 180 EAV + +LA GLKHG VQDKLFLPGL+KL LR +GFFGRMLSVR EFGYWVFEG Q Sbjct: 121 EAVEIARLAEGSGLKHGAVQDKLFLPGLRKLDMLRRAGFFGRMLSVRLEFGYWVFEGDLQ 180 Query: 181 EAQRPSWNYRAEDGGGIILDMVCHWRYVLDNLFGEVESVTCLGTTDIPERYDEKGKKYQA 240 QRPSWNYR EDGGG+ILDM+CHWRYVLDNLFGEV+SV+C+G T IP+R+DE GK Y+A Sbjct: 181 PIQRPSWNYRKEDGGGMILDMMCHWRYVLDNLFGEVKSVSCIGATHIPKRWDEAGKPYEA 240 Query: 241 TADDSAYATFRLKG----GVIAHINMSWVTRVYRDDLVTFQVDGTHGSAVPGLTDCVIQA 296 TADD+AYAT L G VI INMSWVTRV RDDLVTF VDGT GSAV GL+ C Q+ Sbjct: 241 TADDAAYATCELTGHNGEPVIVQINMSWVTRVRRDDLVTFHVDGTDGSAVAGLSSCRAQS 300 Query: 297 RQATPRPVWNPDEKRMHDFYADWQKLPENVVYDNGFKEQWEMFIRHVCEDAPYKYTLLEG 356 R ATPRPVWNPDEK+M +F+ WQ++P++ VYDNGFK QWE FIRHV E+ PYK+TL EG Sbjct: 301 RVATPRPVWNPDEKQMMNFFDQWQEIPDSQVYDNGFKIQWEHFIRHVVENEPYKWTLPEG 360 Query: 357 AKGVQLAECALKSWKERRWIDVAPISV 383 AKGVQL E AL+SWK+RRW+DV + V Sbjct: 361 AKGVQLVEAALESWKDRRWVDVPALKV 387