BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0008.0011.p         (77 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001240605.1| putative 3-oxosteroid 1-dehydrogenase [Brady...   121   4e-26
ref|NP_773445.1| dehydrogenase [Bradyrhizobium japonicum USDA 11...   114   5e-24
ref|ZP_02190258.1| putative dehydrogenase [alpha proteobacterium...   105   3e-21
ref|YP_557434.1| putative dehydrogenase [Burkholderia xenovorans...    99   2e-19
ref|YP_002497986.1| putative succinate dehydrogenase [Methylobac...    98   4e-19

>ref|YP_001240605.1| putative 3-oxosteroid 1-dehydrogenase [Bradyrhizobium sp. BTAi1]
 gb|ABQ36699.1| putative 3-oxosteroid 1-dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 577

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/76 (80%), Positives = 65/76 (85%)

Query: 1   MVIGDLGTNPGIRTDANARALDADGQPIAALYAAGNDMASIMGGNYPGAGITLGPALTFG 60
           MVIGDLGT  GIRTD +ARALDA GQPI  LYAAGNDMASIMGG YPGAGITLGPALTFG
Sbjct: 501 MVIGDLGTYAGIRTDEHARALDAQGQPIEGLYAAGNDMASIMGGTYPGAGITLGPALTFG 560

Query: 61  YIAGKHIAGETAEGSA 76
           YIAG+H+A    +GSA
Sbjct: 561 YIAGRHLAERAGQGSA 576


>ref|NP_773445.1| dehydrogenase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52070.1| blr6805 [Bradyrhizobium japonicum USDA 110]
          Length = 577

 Score =  114 bits (285), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 59/76 (77%), Positives = 65/76 (85%)

Query: 1   MVIGDLGTNPGIRTDANARALDADGQPIAALYAAGNDMASIMGGNYPGAGITLGPALTFG 60
           MVIGDLGT  GI TD NARALDA+G+ I  LYAAGNDMASIMGGNYPGAGITLGPALTFG
Sbjct: 501 MVIGDLGTYAGIITDENARALDAEGRVIPGLYAAGNDMASIMGGNYPGAGITLGPALTFG 560

Query: 61  YIAGKHIAGETAEGSA 76
           YIAG+H+A   A+ +A
Sbjct: 561 YIAGRHLADSAAKRNA 576


>ref|ZP_02190258.1| putative dehydrogenase [alpha proteobacterium BAL199]
 gb|EDP62981.1| putative dehydrogenase [alpha proteobacterium BAL199]
          Length = 566

 Score =  105 bits (261), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 59/69 (85%)

Query: 1   MVIGDLGTNPGIRTDANARALDADGQPIAALYAAGNDMASIMGGNYPGAGITLGPALTFG 60
           +VIGDLGT  G++TDANA+ LD  G+PI  LYAAGND ASIMGGNYPG GITLGPA+TFG
Sbjct: 495 LVIGDLGTFAGVKTDANAQVLDKAGKPIPGLYAAGNDNASIMGGNYPGGGITLGPAMTFG 554

Query: 61  YIAGKHIAG 69
           ++A +HIAG
Sbjct: 555 WVAARHIAG 563


>ref|YP_557434.1| putative dehydrogenase [Burkholderia xenovorans LB400]
 gb|ABE29382.1| Putative dehydrogenase [Burkholderia xenovorans LB400]
          Length = 596

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/76 (65%), Positives = 60/76 (78%), Gaps = 1/76 (1%)

Query: 2   VIGDLGTNPGIRTDANARALDADGQPIAALYAAGNDMASIMGGNYPGAGITLGPALTFGY 61
           VIGDLGT  GIRTD  ARALD+ G  +  LYA GND AS+MGGNYPG GITLGPA+TFG+
Sbjct: 499 VIGDLGTFAGIRTDGCARALDSSGHVVPGLYAVGNDAASVMGGNYPGGGITLGPAMTFGF 558

Query: 62  IAGKHIAGETAEGSAQ 77
           +AG+H A +TA G+ +
Sbjct: 559 LAGEH-AAKTARGARE 573


>ref|YP_002497986.1| putative succinate dehydrogenase [Methylobacterium nodulans ORS
           2060]
 gb|ACL57683.1| fumarate reductase/succinate dehydrogenase flavoprotein domain
           protein [Methylobacterium nodulans ORS 2060]
          Length = 569

 Score = 98.2 bits (243), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 56/72 (77%)

Query: 1   MVIGDLGTNPGIRTDANARALDADGQPIAALYAAGNDMASIMGGNYPGAGITLGPALTFG 60
           +++GDLGT  G+RTD   R L +D +P+  LYA GND ASIMGGNYPGAGITLGP +TFG
Sbjct: 498 LIMGDLGTFDGLRTDTVGRVLRSDARPVPGLYAVGNDRASIMGGNYPGAGITLGPIMTFG 557

Query: 61  YIAGKHIAGETA 72
           +I G+H+AG  A
Sbjct: 558 FITGRHLAGAEA 569