BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0062.p (176 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774570.1| ABC transporter ATP-binding protein [Bradyrhizo... 298 2e-79 ref|ZP_08630858.1| branched-chain amino acid transport ATP-bindi... 278 2e-73 ref|ZP_05042201.1| ABC transporter, ATP-binding protein, putativ... 209 1e-52 ref|ZP_05124064.1| branched-chain amino acid ABC transporter, AT... 199 1e-49 ref|ZP_00999890.1| ABC transporter ATP-binding protein [Oceanico... 194 4e-48 >ref|NP_774570.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC53195.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 252 Score = 298 bits (764), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 144/153 (94%), Positives = 149/153 (97%) Query: 1 MSYFRAENLSLHFGGLKAVDAVSFAVEKGEILSIIGPNGAGKSSIFNLISRIYPPTSGKI 60 MSYFRAENLSLHFGGLKAVDAVSFAVEKGEILSIIGPNGAGKSSIFNLISRIY PTSG+I Sbjct: 1 MSYFRAENLSLHFGGLKAVDAVSFAVEKGEILSIIGPNGAGKSSIFNLISRIYRPTSGRI 60 Query: 61 FFEDQDITQEPAYDIAKLGIARTFQNIELFENATVLSNLLVGRHRHSTTRLWQELLFLPS 120 FFEDQDIT++P YDIA+LGIARTFQNIELFENATVLSNLLVGRHRHSTT+LWQELLFLPS Sbjct: 61 FFEDQDITEQPPYDIARLGIARTFQNIELFENATVLSNLLVGRHRHSTTQLWQELLFLPS 120 Query: 121 VRAGEKAHRRRVEQVIEFLDLEPYRDKLISGLP 153 VRA EK HRRRVEQVIEFLDLEPYRDKLISGLP Sbjct: 121 VRANEKLHRRRVEQVIEFLDLEPYRDKLISGLP 153 >ref|ZP_08630858.1| branched-chain amino acid transport ATP-binding protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06390.1| branched-chain amino acid transport ATP-binding protein [Bradyrhizobiaceae bacterium SG-6C] Length = 252 Score = 278 bits (711), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 134/153 (87%), Positives = 143/153 (93%) Query: 1 MSYFRAENLSLHFGGLKAVDAVSFAVEKGEILSIIGPNGAGKSSIFNLISRIYPPTSGKI 60 MS FRAEN+SLHFGGLKAVD+VSFAVEKGEILSIIGPNGAGKSSIFNLISR+Y PTSGK+ Sbjct: 1 MSCFRAENISLHFGGLKAVDSVSFAVEKGEILSIIGPNGAGKSSIFNLISRLYQPTSGKL 60 Query: 61 FFEDQDITQEPAYDIAKLGIARTFQNIELFENATVLSNLLVGRHRHSTTRLWQELLFLPS 120 +FEDQDIT P YDIA+LGIARTFQNIELFENATVLSNLLVGRHRHSTT LWQELLFLP+ Sbjct: 61 YFEDQDITAAPPYDIARLGIARTFQNIELFENATVLSNLLVGRHRHSTTSLWQELLFLPN 120 Query: 121 VRAGEKAHRRRVEQVIEFLDLEPYRDKLISGLP 153 VR EKAHRRRVEQVI+FLDL +RDKLISGLP Sbjct: 121 VRRDEKAHRRRVEQVIDFLDLAAHRDKLISGLP 153 >ref|ZP_05042201.1| ABC transporter, ATP-binding protein, putative [Alcanivorax sp. DG881] gb|EDX89622.1| ABC transporter, ATP-binding protein, putative [Alcanivorax sp. DG881] Length = 256 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 98/165 (59%), Positives = 130/165 (78%), Gaps = 1/165 (0%) Query: 1 MSYFRAENLSLHFGGLKAVDAVSFAVEKGEILSIIGPNGAGKSSIFNLISRIYPPTSGKI 60 MS + ++LS+ FGG+KAVD VSF V+ GE+ +++GPNGAGKS+IFNLISR+Y P++G+I Sbjct: 1 MSLLQVKDLSISFGGVKAVDGVSFEVKAGEVFTLVGPNGAGKSTIFNLISRLYEPSAGQI 60 Query: 61 FFEDQDITQEPAYDIAKLGIARTFQNIELFENATVLSNLLVGRHRHSTTRLWQELLFLPS 120 F+ QDIT PA+D+A LGIARTFQNIELF++++VL NLL+GRH TR ++ELLFLP Sbjct: 61 IFDGQDITGLPAHDVAGLGIARTFQNIELFDHSSVLQNLLIGRHCRRQTRWFEELLFLPK 120 Query: 121 VRAGEKAHRRRVEQVIEFLDLEPYRDKLISGLPCSTSRRPASMSR 165 VR E+ R VE+VI+FLDL PYRDKLI+GLP R+ ++R Sbjct: 121 VRRSEREQRLLVEEVIDFLDLAPYRDKLIAGLPYGV-RKVVEIAR 164 >ref|ZP_05124064.1| branched-chain amino acid ABC transporter, ATP-binding protein [Rhodobacteraceae bacterium KLH11] gb|EEE38696.1| branched-chain amino acid ABC transporter, ATP-binding protein [Rhodobacteraceae bacterium KLH11] Length = 254 Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 98/169 (57%), Positives = 122/169 (72%), Gaps = 1/169 (0%) Query: 1 MSYFRAENLSLHFGGLKAVDAVSFAVEKGEILSIIGPNGAGKSSIFNLISRIYPPTSGKI 60 MS EN++L FGGL AVD +SF VE GE+ +I+GPNGAGKS++FNLISR Y P +G I Sbjct: 1 MSLLEFENVTLTFGGLTAVDDLSFQVEHGEVFAIVGPNGAGKSTVFNLISRFYDPDAGAI 60 Query: 61 FFEDQDITQEPAYDIAKLGIARTFQNIELFENATVLSNLLVGRHRHSTTRLWQELLFLPS 120 F+ QD+ Q + +A G+ARTFQNIELFE+ATVL NLLVGRHRH T L E+LF PS Sbjct: 61 RFDGQDLLQVKSSGVAAFGVARTFQNIELFEHATVLQNLLVGRHRHRRTNLLSEILFTPS 120 Query: 121 VRAGEKAHRRRVEQVIEFLDLEPYRDKLISGLPCSTSRRPASMSRRPTT 169 R E +R +VE VI+FLDL+P+RDKLISGLP R+ ++R T Sbjct: 121 ARRQEIENREKVEAVIDFLDLQPFRDKLISGLPYGV-RKVVEVARALAT 168 >ref|ZP_00999890.1| ABC transporter ATP-binding protein [Oceanicola batsensis HTCC2597] gb|EAQ02898.1| ABC transporter ATP-binding protein [Oceanicola batsensis HTCC2597] Length = 256 Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 102/158 (64%), Positives = 127/158 (80%) Query: 1 MSYFRAENLSLHFGGLKAVDAVSFAVEKGEILSIIGPNGAGKSSIFNLISRIYPPTSGKI 60 MS + E+L++HFGG+KAVD VSF+VE+GE+ +IIGPNGAGKS+IFNLISR+YPPT G I Sbjct: 1 MSLLQVEDLAIHFGGVKAVDGVSFSVEQGEVFAIIGPNGAGKSTIFNLISRVYPPTRGTI 60 Query: 61 FFEDQDITQEPAYDIAKLGIARTFQNIELFENATVLSNLLVGRHRHSTTRLWQELLFLPS 120 F+ +DIT A+DIA LGIARTFQNIELF+++TVL NLL+GRH H T Q++LFLP Sbjct: 61 RFDGRDITGLKAHDIAGLGIARTFQNIELFDHSTVLDNLLMGRHTHRGTNFVQDILFLPK 120 Query: 121 VRAGEKAHRRRVEQVIEFLDLEPYRDKLISGLPCSTSR 158 VR E+ HRRRVEQVIE L+LE YR K+I+GLP + Sbjct: 121 VRQEEREHRRRVEQVIELLELEAYRKKMIAGLPYGVRK 158