BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0059.p         (112 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774569.1| ABC transporter ATP-binding protein [Bradyrhizo...   221   2e-56
ref|ZP_08630857.1| ABC transporter ATP-binding protein [Bradyrhi...   221   4e-56
ref|ZP_05089971.1| branched-chain amino acid ABC transporter, AT...   165   2e-39
ref|ZP_02149320.1| branched-chain amino acid ABC transporter, AT...   164   3e-39
ref|ZP_02146954.1| branched-chain amino acid ABC transporter, AT...   164   3e-39

>ref|NP_774569.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA
           110]
 dbj|BAC53194.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA
           110]
          Length = 262

 Score =  221 bits (564), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 106/112 (94%), Positives = 111/112 (99%)

Query: 1   MLAIGRALMNRPTLLLLDEPSLGLSPILVKEIFTIIRRVNEEQGMSILLVEQNAKIALET 60
           MLAIGRALMNRPTLLLLDEPSLGLSP+LVKEIFTIIRRVNEEQGMSILLVEQNAK+ALET
Sbjct: 151 MLAIGRALMNRPTLLLLDEPSLGLSPLLVKEIFTIIRRVNEEQGMSILLVEQNAKVALET 210

Query: 61  AHYGYVLEIGRVVMNDTCERLMNSPDIQEFYLGAKEAGARGERRWKKKKTWR 112
           AHYGYVLEIGR+VMNDTC+RLM+S DIQEFYLGAKEAGARGERRWKKKKTWR
Sbjct: 211 AHYGYVLEIGRIVMNDTCDRLMHSQDIQEFYLGAKEAGARGERRWKKKKTWR 262


>ref|ZP_08630857.1| ABC transporter ATP-binding protein [Bradyrhizobiaceae bacterium
           SG-6C]
 gb|EGP06389.1| ABC transporter ATP-binding protein [Bradyrhizobiaceae bacterium
           SG-6C]
          Length = 259

 Score =  221 bits (562), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 107/112 (95%), Positives = 109/112 (97%)

Query: 1   MLAIGRALMNRPTLLLLDEPSLGLSPILVKEIFTIIRRVNEEQGMSILLVEQNAKIALET 60
           MLAIGRALMNRPTLLLLDEPSLGLSP+LVKEIFTIIRRVNEEQGMSILLVEQNAK+ALET
Sbjct: 148 MLAIGRALMNRPTLLLLDEPSLGLSPLLVKEIFTIIRRVNEEQGMSILLVEQNAKVALET 207

Query: 61  AHYGYVLEIGRVVMNDTCERLMNSPDIQEFYLGAKEAGARGERRWKKKKTWR 112
           AHYGYVLEIGRVVMNDTCERLM S DIQEFYLGAKE GARGERRWKKKKTWR
Sbjct: 208 AHYGYVLEIGRVVMNDTCERLMQSQDIQEFYLGAKEDGARGERRWKKKKTWR 259


>ref|ZP_05089971.1| branched-chain amino acid ABC transporter, ATP-binding protein
           [Ruegeria sp. R11]
 gb|EEB71663.1| branched-chain amino acid ABC transporter, ATP-binding protein
           [Ruegeria sp. R11]
          Length = 258

 Score =  165 bits (418), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 76/112 (67%), Positives = 95/112 (84%)

Query: 1   MLAIGRALMNRPTLLLLDEPSLGLSPILVKEIFTIIRRVNEEQGMSILLVEQNAKIALET 60
           MLAIGR LM RP ++LLDEPSLGLSP+LV+EIF I+ R+N E+G++++LVEQNA+IALE 
Sbjct: 147 MLAIGRGLMLRPRIMLLDEPSLGLSPLLVQEIFAILGRLNREEGVTMMLVEQNARIALEL 206

Query: 61  AHYGYVLEIGRVVMNDTCERLMNSPDIQEFYLGAKEAGARGERRWKKKKTWR 112
           AH GYV+EIGR+VMN   +RLM S DI+ FYLG +EAG R E+RWK+KKTWR
Sbjct: 207 AHVGYVMEIGRIVMNGDADRLMQSEDIKAFYLGQQEAGQRSEKRWKRKKTWR 258


>ref|ZP_02149320.1| branched-chain amino acid ABC transporter, ATP-binding protein
           [Phaeobacter gallaeciensis 2.10]
 gb|EDQ09032.1| branched-chain amino acid ABC transporter, ATP-binding protein
           [Phaeobacter gallaeciensis 2.10]
          Length = 257

 Score =  164 bits (416), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 74/112 (66%), Positives = 97/112 (86%)

Query: 1   MLAIGRALMNRPTLLLLDEPSLGLSPILVKEIFTIIRRVNEEQGMSILLVEQNAKIALET 60
           MLAIGR LM RP ++LLDEPSLGLSP+LV+EIF I++R+N ++G++++LVEQNA+IALE 
Sbjct: 146 MLAIGRGLMLRPRIMLLDEPSLGLSPLLVQEIFGILKRLNRDEGVTMMLVEQNARIALEL 205

Query: 61  AHYGYVLEIGRVVMNDTCERLMNSPDIQEFYLGAKEAGARGERRWKKKKTWR 112
           AH GYV+EIGR+VM+ + +RLM S DI+ FYLG +EAG R E+RWK+KKTWR
Sbjct: 206 AHVGYVMEIGRIVMDGSADRLMESEDIKSFYLGHQEAGQRSEKRWKRKKTWR 257


>ref|ZP_02146954.1| branched-chain amino acid ABC transporter, ATP-binding protein
           [Phaeobacter gallaeciensis BS107]
 gb|EDQ11656.1| branched-chain amino acid ABC transporter, ATP-binding protein
           [Phaeobacter gallaeciensis BS107]
          Length = 257

 Score =  164 bits (416), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 74/112 (66%), Positives = 97/112 (86%)

Query: 1   MLAIGRALMNRPTLLLLDEPSLGLSPILVKEIFTIIRRVNEEQGMSILLVEQNAKIALET 60
           MLAIGR LM RP ++LLDEPSLGLSP+LV+EIF I++R+N ++G++++LVEQNA+IALE 
Sbjct: 146 MLAIGRGLMLRPRIMLLDEPSLGLSPLLVQEIFGILKRLNRDEGVTMMLVEQNARIALEL 205

Query: 61  AHYGYVLEIGRVVMNDTCERLMNSPDIQEFYLGAKEAGARGERRWKKKKTWR 112
           AH GYV+EIGR+VM+ + +RLM S DI+ FYLG +EAG R E+RWK+KKTWR
Sbjct: 206 AHVGYVMEIGRIVMDGSADRLMESEDIKSFYLGHQEAGQRSEKRWKRKKTWR 257