BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0054.p (209 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242940.1| adenylate/guanylate cyclase [Bradyrhizobium ... 219 1e-55 ref|YP_001203056.1| adenylate/guanylyl cyclase [Bradyrhizobium s... 218 3e-55 ref|NP_774563.1| adenylate/guanylate cyclase transmembrane prote... 194 1e-47 ref|ZP_08629839.1| sdenylate cyclase [Bradyrhizobiaceae bacteriu... 177 1e-42 ref|ZP_07027099.1| adenylate/guanylate cyclase with Chase sensor... 167 6e-40 >ref|YP_001242940.1| adenylate/guanylate cyclase [Bradyrhizobium sp. BTAi1] gb|ABQ39034.1| adenylate/guanylate cyclase [Bradyrhizobium sp. BTAi1] Length = 744 Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 120/201 (59%), Positives = 136/201 (67%), Gaps = 7/201 (3%) Query: 1 MKRLKAIRRWFARRFGYARLVCVALLIGIAALRIVDPAPVQELRVRTFDTFQALQPRQKT 60 MKRLKA+ RWFARRFGYAR +C+ LL+G A LR+ DPA VQELRVRTFD FQ L PR KT Sbjct: 1 MKRLKAVPRWFARRFGYARAICLLLLLGFAGLRVADPALVQELRVRTFDNFQVLSPRVKT 60 Query: 61 ARPVTIVDIDEKSLADPRLGQWPWPRTRLADIVTNLTRLGAVVIAFDAVFSEPDRLNPDI 120 RPVTIVDIDEKSLADP+LGQWPWPRTR+A+I+ LTRLGAVVIAFD VF+EPDRLNP + Sbjct: 61 VRPVTIVDIDEKSLADPKLGQWPWPRTRIAEIIDRLTRLGAVVIAFDVVFAEPDRLNPAL 120 Query: 121 AADTFSSLDEEMRARLRQPPXQAAAAAEQRQHHGRSHQELARGARRVRRAQRARRPQRKA 180 AA+TF +LDE R +LR P AE Q RS L RA R + Sbjct: 121 AAETFPNLDEATRDKLRTLPSNDQVLAEALQ---RSRVVLGESGGPEARADLDRTLPKTG 177 Query: 181 SGHRTCDARRGAATFHVHVPG 201 R DA R F + PG Sbjct: 178 IATRGQDAER----FMWNFPG 194 >ref|YP_001203056.1| adenylate/guanylyl cyclase [Bradyrhizobium sp. ORS 278] emb|CAL74819.1| putative adenylate/guanylyl cyclase with a CHASE2 domain [Bradyrhizobium sp. ORS 278] Length = 744 Score = 218 bits (556), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 103/148 (69%), Positives = 121/148 (81%) Query: 1 MKRLKAIRRWFARRFGYARLVCVALLIGIAALRIVDPAPVQELRVRTFDTFQALQPRQKT 60 MKRL+A+ RWFARRFGYAR +C+ LL+G AALR DPAP+QELR+RTFD FQA PR K+ Sbjct: 1 MKRLRAVPRWFARRFGYARAICLLLLVGFAALRGSDPAPLQELRLRTFDNFQAFSPRVKS 60 Query: 61 ARPVTIVDIDEKSLADPRLGQWPWPRTRLADIVTNLTRLGAVVIAFDAVFSEPDRLNPDI 120 RPVTIVDIDEKS+ADP+LGQWPWPRTR+A+I+ LTRLGAVVIAFD VF+EPDRLNP I Sbjct: 61 VRPVTIVDIDEKSVADPKLGQWPWPRTRIAEIIDRLTRLGAVVIAFDVVFAEPDRLNPAI 120 Query: 121 AADTFSSLDEEMRARLRQPPXQAAAAAE 148 AA+TF +LDE R +LR P A+ Sbjct: 121 AAETFPNLDEATREKLRLLPSNDQVLAD 148 >ref|NP_774563.1| adenylate/guanylate cyclase transmembrane protein [Bradyrhizobium japonicum USDA 110] dbj|BAC53188.1| bll7923 [Bradyrhizobium japonicum USDA 110] Length = 743 Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 93/148 (62%), Positives = 111/148 (75%), Gaps = 2/148 (1%) Query: 1 MKRLKAIRRWFARRFGYARLVCVALLIGIAALRIVDPAPVQELRVRTFDTFQALQPRQKT 60 MKRLK +RRWFAR+ G ARL+C+ALL+ A R+ DP P+QELR+RTFD FQ + PR KT Sbjct: 1 MKRLKILRRWFARKLGLARLMCLALLVVFAGARLWDPPPIQELRLRTFDMFQLIDPRHKT 60 Query: 61 ARPVTIVDIDEKSLADPRLGQWPWPRTRLADIVTNLTRLGAVVIAFDAVFSEPDRLNPDI 120 ARPVTIVDID+KSLA RLGQWPWPRTR+AD++ NLT GAV I FD VFSE DRLNPD+ Sbjct: 61 ARPVTIVDIDDKSLA--RLGQWPWPRTRIADLIQNLTSNGAVAIGFDVVFSEADRLNPDL 118 Query: 121 AADTFSSLDEEMRARLRQPPXQAAAAAE 148 A LD+ RA+LR+ P A+ Sbjct: 119 VASQMRYLDDATRAKLRELPTNDQILAD 146 >ref|ZP_08629839.1| sdenylate cyclase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07482.1| sdenylate cyclase [Bradyrhizobiaceae bacterium SG-6C] Length = 750 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 89/146 (60%), Positives = 107/146 (73%), Gaps = 2/146 (1%) Query: 3 RLKAIRRWFARRFGYARLVCVALLIGIAALRIVDPAPVQELRVRTFDTFQALQPRQKTAR 62 R A R +AR+FGYARL+C+ LL G+ ALR+ DP P++ELRVRTFD +Q L PR+ T R Sbjct: 11 RFLARLRHYARKFGYARLLCLVLLAGMIALRVADPFPLEELRVRTFDAYQILHPRKITQR 70 Query: 63 PVTIVDIDEKSLADPRLGQWPWPRTRLADIVTNLTRLGAVVIAFDAVFSEPDRLNPDIAA 122 PV I+DIDEKSLA + GQWPWPRTR+AD+V LT LGA IAFD VF+E DRL+P IAA Sbjct: 71 PVVIIDIDEKSLA--KFGQWPWPRTRVADLVQRLTDLGAAAIAFDIVFAEQDRLSPAIAA 128 Query: 123 DTFSSLDEEMRARLRQPPXQAAAAAE 148 DTF LDE R RLR+ P A+ Sbjct: 129 DTFRDLDEISRTRLRELPSNDQVFAD 154 >ref|ZP_07027099.1| adenylate/guanylate cyclase with Chase sensor [Afipia sp. 1NLS2] gb|EFI51942.1| adenylate/guanylate cyclase with Chase sensor [Afipia sp. 1NLS2] Length = 745 Score = 167 bits (424), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 79/139 (56%), Positives = 100/139 (71%), Gaps = 2/139 (1%) Query: 10 WFARRFGYARLVCVALLIGIAALRIVDPAPVQELRVRTFDTFQALQPRQKTARPVTIVDI 69 W ARRFGYAR++C+ LL I LR +DP P++ELR+R FD +Q L+PR+ RPV IVD+ Sbjct: 13 WLARRFGYARILCLGLLAAIVGLRAIDPVPLEELRLRVFDLYQILKPRKAVERPVVIVDL 72 Query: 70 DEKSLADPRLGQWPWPRTRLADIVTNLTRLGAVVIAFDAVFSEPDRLNPDIAADTFSSLD 129 DE SLA R GQWPWPRTR+AD+V+ LT GA VIAFD VF+EPDRL+P A ++F LD Sbjct: 73 DEASLA--RFGQWPWPRTRVADLVSRLTEAGAAVIAFDIVFAEPDRLSPSRAVESFRGLD 130 Query: 130 EEMRARLRQPPXQAAAAAE 148 E +R +L+ P AE Sbjct: 131 EAIRTQLKSLPDNDQIFAE 149