BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0051.p (550 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774561.1| ABC transporter substrate-binding protein [Brad... 999 0.0 ref|YP_531100.1| extracellular solute-binding protein [Rhodopseu... 977 0.0 ref|YP_001242938.1| putative oligopeptide ABC transporter substr... 975 0.0 ref|YP_001203058.1| putative oligopeptide ABC transporter substr... 966 0.0 ref|YP_483847.1| extracellular solute-binding protein [Rhodopseu... 957 0.0 >ref|NP_774561.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC53186.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 597 Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust. Identities = 478/527 (90%), Positives = 502/527 (95%) Query: 22 PAIAGAETVLRIGMTAADIPRTLGQPDQGFEGNRFTGLTMYDALTMWDLSSSDKASAMIP 81 P +A AETVLRIGMTAADIPRTLGQPDQGFEGNRFTGLTMYDALT WDLSS+DK S +IP Sbjct: 70 PRVASAETVLRIGMTAADIPRTLGQPDQGFEGNRFTGLTMYDALTGWDLSSADKPSVVIP 129 Query: 82 GLATEWKVDDADKTKWIFKLRPDVTFHDGSPFNADAVVWNVDKVLKQDAPQYDASQVGVT 141 GLATEWKVDDADKTKW FKLRP VTFHDGSPFNADAVVWNV+KVLKQDAPQ+DASQVGVT Sbjct: 130 GLATEWKVDDADKTKWTFKLRPGVTFHDGSPFNADAVVWNVEKVLKQDAPQFDASQVGVT 189 Query: 142 ASRMPTLVSARKIDDMTVGLTTKEPDSFLPINLTNLFMASPAKWQQFYDKAEGADAKAKS 201 ASRMPTL SA+KIDDMTV LTTKEPDSFLPINLTNLFMASPAKWQ FYDKAEGADAKAKS Sbjct: 190 ASRMPTLASAKKIDDMTVELTTKEPDSFLPINLTNLFMASPAKWQHFYDKAEGADAKAKS 249 Query: 202 QAAWAAFAKDASGTGPWKMSSFTPRERLELVKNENYWDKARVPKVDKMVLLPMPEANART 261 QAAW AFAKDA+GTGPWKM+SFTPRERLELVKN +YWDKARVPKVDKMVLLPMPEANART Sbjct: 250 QAAWTAFAKDAAGTGPWKMASFTPRERLELVKNASYWDKARVPKVDKMVLLPMPEANART 309 Query: 262 AALLSGQVNWIEAPAPDALPEIKQRGFNLYSNEEPHVWPWQFSRVEGSPWNDIRVRKAAN 321 AALLSGQV+W+EAPAPDALPE+KQRGF LY+NE+PHVWPWQFSR+EGSPWNDIRVRKAAN Sbjct: 310 AALLSGQVDWVEAPAPDALPELKQRGFKLYANEQPHVWPWQFSRIEGSPWNDIRVRKAAN 369 Query: 322 LCVDREGLRDGLLAGLMVPATGTFEPGHPWRGNPTFQIKYDKPAAQKLMQEAGFGPNKKL 381 LCVDREGL+DGLLAGLMVPATGTFEPGHPWRG P F+IKYDK AAQKLMQEAGFGPNKKL Sbjct: 370 LCVDREGLKDGLLAGLMVPATGTFEPGHPWRGKPAFEIKYDKAAAQKLMQEAGFGPNKKL 429 Query: 382 TVKIQTSASGSGQMLPLPMNEYLQQALAECYFDVQLDVIEWNTLFTNWRRGTKDPTANGS 441 VKIQTSASGSGQM PLPMNEYLQQALAECYFDV+LDVIEWNTLFTNWRRG KDP+ANGS Sbjct: 430 EVKIQTSASGSGQMQPLPMNEYLQQALAECYFDVKLDVIEWNTLFTNWRRGAKDPSANGS 489 Query: 442 NAINVTYAAMDPFFALVRFLQSGMAPPVSNNWGFNNNPKFDELVKKARQTFEPAARDAAL 501 NA NVTYAAMDPFFALVRFLQSGMAPPVSNNWGF NNPKFDELVKKARQTF+PAARDAAL Sbjct: 490 NATNVTYAAMDPFFALVRFLQSGMAPPVSNNWGFINNPKFDELVKKARQTFDPAARDAAL 549 Query: 502 AELHAASVDDAAFLYVAHDVAPRAMSPKVKGFVQPKSWFVDFSPVTV 548 AELHAASVDDAAFLYVAHDV PRA+SPKV G VQPKSWF+DFS V++ Sbjct: 550 AELHAASVDDAAFLYVAHDVGPRAISPKVTGVVQPKSWFIDFSLVSM 596 >ref|YP_531100.1| extracellular solute-binding protein [Rhodopseudomonas palustris BisB18] gb|ABD86781.1| extracellular solute-binding protein, family 5 [Rhodopseudomonas palustris BisB18] Length = 555 Score = 977 bits (2525), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/547 (84%), Positives = 501/547 (91%) Query: 4 RKTNATAIMLALAIATGVPAIAGAETVLRIGMTAADIPRTLGQPDQGFEGNRFTGLTMYD 63 R+T A +L A A +P AGAE VLRIGMTAAD+PRTLGQPDQGFEGNRFTGLTMYD Sbjct: 9 RRTAAAVFVLTTASAIALPQSAGAEAVLRIGMTAADVPRTLGQPDQGFEGNRFTGLTMYD 68 Query: 64 ALTMWDLSSSDKASAMIPGLATEWKVDDADKTKWIFKLRPDVTFHDGSPFNADAVVWNVD 123 ALTMWDLSS+ KAS +IPGLATEW V+++DKTKW FKLRP V+FHDGSPFNADAVVWNV+ Sbjct: 69 ALTMWDLSSATKASVVIPGLATEWAVNESDKTKWTFKLRPGVSFHDGSPFNADAVVWNVE 128 Query: 124 KVLKQDAPQYDASQVGVTASRMPTLVSARKIDDMTVGLTTKEPDSFLPINLTNLFMASPA 183 KVLKQDAPQ+DASQVGVTASRMPTLVSA+KIDDMTV LTTKEPDSFLPINLTNLFM SP+ Sbjct: 129 KVLKQDAPQFDASQVGVTASRMPTLVSAKKIDDMTVELTTKEPDSFLPINLTNLFMVSPS 188 Query: 184 KWQQFYDKAEGADAKAKSQAAWAAFAKDASGTGPWKMSSFTPRERLELVKNENYWDKARV 243 KWQ Y+KAEGADAKAKSQAAWA+FAKDASGTGPWKMS FTPRERLELVKN+ YWD RV Sbjct: 189 KWQALYEKAEGADAKAKSQAAWASFAKDASGTGPWKMSKFTPRERLELVKNDKYWDATRV 248 Query: 244 PKVDKMVLLPMPEANARTAALLSGQVNWIEAPAPDALPEIKQRGFNLYSNEEPHVWPWQF 303 P VD++VLLPMPEANARTAALLSGQV+WIEAPAPDA+ EI RGF + NE+PHVWPWQF Sbjct: 249 PHVDRLVLLPMPEANARTAALLSGQVDWIEAPAPDAVKEITARGFKIEKNEQPHVWPWQF 308 Query: 304 SRVEGSPWNDIRVRKAANLCVDREGLRDGLLAGLMVPATGTFEPGHPWRGNPTFQIKYDK 363 SRVEGSPWNDIRVR+AANLC+DREGLRDGLLAGLMVPATGTFEPGHPWRG P FQIKYD Sbjct: 309 SRVEGSPWNDIRVRRAANLCIDREGLRDGLLAGLMVPATGTFEPGHPWRGKPAFQIKYDL 368 Query: 364 PAAQKLMQEAGFGPNKKLTVKIQTSASGSGQMLPLPMNEYLQQALAECYFDVQLDVIEWN 423 PAAQKLM+EAG+GP KKL+VK+QTSASGSGQMLPLPMNEYLQQALAECYFDV+LDVIEWN Sbjct: 369 PAAQKLMKEAGYGPTKKLSVKVQTSASGSGQMLPLPMNEYLQQALAECYFDVKLDVIEWN 428 Query: 424 TLFTNWRRGTKDPTANGSNAINVTYAAMDPFFALVRFLQSGMAPPVSNNWGFNNNPKFDE 483 TLFTNWRRGTKDP+ANG+NA NVTYAAMDPFFA+VRFLQS MAPPVSNNWGF NNPKFD Sbjct: 429 TLFTNWRRGTKDPSANGANATNVTYAAMDPFFAMVRFLQSSMAPPVSNNWGFINNPKFDA 488 Query: 484 LVKKARQTFEPAARDAALAELHAASVDDAAFLYVAHDVAPRAMSPKVKGFVQPKSWFVDF 543 LV KAR TF+ + RD ALAELHAASVDDAAFLYVAHDV PRA+SPKVKGFVQPKSWFVDF Sbjct: 489 LVTKARTTFDASLRDEALAELHAASVDDAAFLYVAHDVGPRALSPKVKGFVQPKSWFVDF 548 Query: 544 SPVTVAP 550 SPVT+AP Sbjct: 549 SPVTLAP 555 >ref|YP_001242938.1| putative oligopeptide ABC transporter substrate binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ39032.1| Putative oligopeptide ABC transporter (substrate binding protein) [Bradyrhizobium sp. BTAi1] Length = 557 Score = 975 bits (2521), Expect = 0.0, Method: Compositional matrix adjust. Identities = 478/542 (88%), Positives = 504/542 (92%) Query: 9 TAIMLALAIATGVPAIAGAETVLRIGMTAADIPRTLGQPDQGFEGNRFTGLTMYDALTMW 68 A M+ A +PA AGA++VLRIGMTAADIPRTLGQPDQGFEGNRFTGLTMYDALTMW Sbjct: 16 VAAMMTTVSAFALPATAGADSVLRIGMTAADIPRTLGQPDQGFEGNRFTGLTMYDALTMW 75 Query: 69 DLSSSDKASAMIPGLATEWKVDDADKTKWIFKLRPDVTFHDGSPFNADAVVWNVDKVLKQ 128 DLSS+DK S +IPGLATEWKVDDADKTKW FKLRP VTFHDG+PFNADAVVWNV+KVLKQ Sbjct: 76 DLSSADKPSVVIPGLATEWKVDDADKTKWTFKLRPGVTFHDGAPFNADAVVWNVEKVLKQ 135 Query: 129 DAPQYDASQVGVTASRMPTLVSARKIDDMTVGLTTKEPDSFLPINLTNLFMASPAKWQQF 188 DAPQ+DASQVGVTASRMPTLVSARKIDD+TV LTTKEPDSFLPINLTNLFMASPAKWQ+ Sbjct: 136 DAPQFDASQVGVTASRMPTLVSARKIDDLTVELTTKEPDSFLPINLTNLFMASPAKWQKL 195 Query: 189 YDKAEGADAKAKSQAAWAAFAKDASGTGPWKMSSFTPRERLELVKNENYWDKARVPKVDK 248 Y+ A GAD KAKSQAAWAAFAKDASGTGPWKMS FTPRERLELVKNE YWDKARVPK DK Sbjct: 196 YEAASGADDKAKSQAAWAAFAKDASGTGPWKMSKFTPRERLELVKNEAYWDKARVPKADK 255 Query: 249 MVLLPMPEANARTAALLSGQVNWIEAPAPDALPEIKQRGFNLYSNEEPHVWPWQFSRVEG 308 M+LLPMPEANARTAALLSGQV+W+EAPAPDALPEIKQRGF LY+NE+PHVWPWQFSRVEG Sbjct: 256 MILLPMPEANARTAALLSGQVDWVEAPAPDALPEIKQRGFKLYANEQPHVWPWQFSRVEG 315 Query: 309 SPWNDIRVRKAANLCVDREGLRDGLLAGLMVPATGTFEPGHPWRGNPTFQIKYDKPAAQK 368 SPWNDIRVRKAANLCVDREGLRDGLLAGLMVPA+GTFE GHPWRGN TF+IKYDK AAQK Sbjct: 316 SPWNDIRVRKAANLCVDREGLRDGLLAGLMVPASGTFEKGHPWRGNVTFEIKYDKAAAQK 375 Query: 369 LMQEAGFGPNKKLTVKIQTSASGSGQMLPLPMNEYLQQALAECYFDVQLDVIEWNTLFTN 428 LMQEAGFGP KKL VKIQTSASGSGQM PLPMNEYLQQALAECYFDV+LDVIEWNTLFTN Sbjct: 376 LMQEAGFGPGKKLEVKIQTSASGSGQMQPLPMNEYLQQALAECYFDVKLDVIEWNTLFTN 435 Query: 429 WRRGTKDPTANGSNAINVTYAAMDPFFALVRFLQSGMAPPVSNNWGFNNNPKFDELVKKA 488 WRRG KDP+ANG+NA NVTYAAMDPFFALVRFLQS MAPPVSNNWGF NNPKFDELVKKA Sbjct: 436 WRRGAKDPSANGANATNVTYAAMDPFFALVRFLQSSMAPPVSNNWGFINNPKFDELVKKA 495 Query: 489 RQTFEPAARDAALAELHAASVDDAAFLYVAHDVAPRAMSPKVKGFVQPKSWFVDFSPVTV 548 RQTF+P RD ALAELHAASVDDAAFLYVAHDV PRAMSPKVKG VQPKSWF+DFSP++V Sbjct: 496 RQTFDPTERDKALAELHAASVDDAAFLYVAHDVGPRAMSPKVKGVVQPKSWFIDFSPISV 555 Query: 549 AP 550 P Sbjct: 556 EP 557 >ref|YP_001203058.1| putative oligopeptide ABC transporter substrate binding protein [Bradyrhizobium sp. ORS 278] emb|CAL74821.1| Putative oligopeptide ABC transporter (substrate binding protein) [Bradyrhizobium sp. ORS 278] Length = 557 Score = 966 bits (2496), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/541 (87%), Positives = 501/541 (92%) Query: 10 AIMLALAIATGVPAIAGAETVLRIGMTAADIPRTLGQPDQGFEGNRFTGLTMYDALTMWD 69 A M+ A +PA AGAE+VLRIGMTAADIPRTLGQPDQGFEGNRFTGLTMYDALTMWD Sbjct: 17 AAMMTSAAILMLPATAGAESVLRIGMTAADIPRTLGQPDQGFEGNRFTGLTMYDALTMWD 76 Query: 70 LSSSDKASAMIPGLATEWKVDDADKTKWIFKLRPDVTFHDGSPFNADAVVWNVDKVLKQD 129 LSS+DK S +IPGLATEWKVD++DKTKW FKLRP VTFHDG+PFNADAVVWNV+KVLKQD Sbjct: 77 LSSADKPSVVIPGLATEWKVDESDKTKWTFKLRPGVTFHDGAPFNADAVVWNVEKVLKQD 136 Query: 130 APQYDASQVGVTASRMPTLVSARKIDDMTVGLTTKEPDSFLPINLTNLFMASPAKWQQFY 189 APQ+D SQVGVTASRMPTL SARKIDD+TV L TKEPDSFLPINLTNLFMASPAKWQ+ Y Sbjct: 137 APQFDPSQVGVTASRMPTLASARKIDDLTVELVTKEPDSFLPINLTNLFMASPAKWQKLY 196 Query: 190 DKAEGADAKAKSQAAWAAFAKDASGTGPWKMSSFTPRERLELVKNENYWDKARVPKVDKM 249 + A GAD KAKSQAAWAAFAKDASGTGPWKMS FTPRERLELVKNE YWDKARVPK DKM Sbjct: 197 ESATGADDKAKSQAAWAAFAKDASGTGPWKMSKFTPRERLELVKNEAYWDKARVPKADKM 256 Query: 250 VLLPMPEANARTAALLSGQVNWIEAPAPDALPEIKQRGFNLYSNEEPHVWPWQFSRVEGS 309 +LLPMPEANARTAALLSGQV+W+EAPAPDALPEIKQRGF LY+NE+PHVWPWQFSRVEGS Sbjct: 257 ILLPMPEANARTAALLSGQVDWVEAPAPDALPEIKQRGFKLYANEQPHVWPWQFSRVEGS 316 Query: 310 PWNDIRVRKAANLCVDREGLRDGLLAGLMVPATGTFEPGHPWRGNPTFQIKYDKPAAQKL 369 PWNDIRVRKAANLC+DREGLRDGLLAGLMVPATGTFE GHPWRGN TF+IKYDK AAQKL Sbjct: 317 PWNDIRVRKAANLCIDREGLRDGLLAGLMVPATGTFEKGHPWRGNVTFEIKYDKAAAQKL 376 Query: 370 MQEAGFGPNKKLTVKIQTSASGSGQMLPLPMNEYLQQALAECYFDVQLDVIEWNTLFTNW 429 MQEAG+GPNKKL VK QTSASGSGQM PLPMNEYLQQALAECYFDV+LDVIEWNTLFTNW Sbjct: 377 MQEAGYGPNKKLEVKTQTSASGSGQMQPLPMNEYLQQALAECYFDVKLDVIEWNTLFTNW 436 Query: 430 RRGTKDPTANGSNAINVTYAAMDPFFALVRFLQSGMAPPVSNNWGFNNNPKFDELVKKAR 489 RRG KD +ANG+NA NVTYAAMDPFFALVRFLQS MAPPVSNNWGF NNPKFDELVKKAR Sbjct: 437 RRGAKDASANGANATNVTYAAMDPFFALVRFLQSSMAPPVSNNWGFINNPKFDELVKKAR 496 Query: 490 QTFEPAARDAALAELHAASVDDAAFLYVAHDVAPRAMSPKVKGFVQPKSWFVDFSPVTVA 549 QTF+PA RD ALAELHAASVDDAAFLYVAHDV PRAMSPKVKG VQPKSWF+DFSP++V Sbjct: 497 QTFDPAERDKALAELHAASVDDAAFLYVAHDVGPRAMSPKVKGVVQPKSWFIDFSPISVE 556 Query: 550 P 550 P Sbjct: 557 P 557 >ref|YP_483847.1| extracellular solute-binding protein [Rhodopseudomonas palustris HaA2] gb|ABD04936.1| extracellular solute-binding protein, family 5 [Rhodopseudomonas palustris HaA2] Length = 553 Score = 957 bits (2475), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/544 (85%), Positives = 507/544 (93%), Gaps = 2/544 (0%) Query: 9 TAIMLALAI--ATGVPAIAGAETVLRIGMTAADIPRTLGQPDQGFEGNRFTGLTMYDALT 66 TA++LAL + VP IA +ETVLRIGMTAADIPRTLGQPDQGFEGNRFTGLTMYD LT Sbjct: 10 TAVLLALTAVGSVAVPQIASSETVLRIGMTAADIPRTLGQPDQGFEGNRFTGLTMYDGLT 69 Query: 67 MWDLSSSDKASAMIPGLATEWKVDDADKTKWIFKLRPDVTFHDGSPFNADAVVWNVDKVL 126 MWDLSS+ KAS +IPGLATEWKV+DADKTKWIFKLRP VTFHDG+PFNADAVVWNVDKVL Sbjct: 70 MWDLSSATKASVVIPGLATEWKVEDADKTKWIFKLRPGVTFHDGTPFNADAVVWNVDKVL 129 Query: 127 KQDAPQYDASQVGVTASRMPTLVSARKIDDMTVGLTTKEPDSFLPINLTNLFMASPAKWQ 186 ++A Q+DASQVGVTASRMPTLVSA+KIDDMTV LT KEPDSFLPINLTNLF+ SP+KWQ Sbjct: 130 NKEAVQFDASQVGVTASRMPTLVSAKKIDDMTVELTAKEPDSFLPINLTNLFIVSPSKWQ 189 Query: 187 QFYDKAEGADAKAKSQAAWAAFAKDASGTGPWKMSSFTPRERLELVKNENYWDKARVPKV 246 Y+KAEGADAKA+SQAAWAAFAKDA+GTGPWKM+ FTPRERLELVKN+NYWDKARVPK Sbjct: 190 ALYEKAEGADAKARSQAAWAAFAKDAAGTGPWKMAKFTPRERLELVKNDNYWDKARVPKT 249 Query: 247 DKMVLLPMPEANARTAALLSGQVNWIEAPAPDALPEIKQRGFNLYSNEEPHVWPWQFSRV 306 D+MVLLPMPEANARTAALLSGQV+WIEAPAPDA+ EI RGF + NE+PHVWPWQFSR+ Sbjct: 250 DRMVLLPMPEANARTAALLSGQVDWIEAPAPDAVKEITARGFKIEKNEQPHVWPWQFSRI 309 Query: 307 EGSPWNDIRVRKAANLCVDREGLRDGLLAGLMVPATGTFEPGHPWRGNPTFQIKYDKPAA 366 EGSPWNDIRVR+AANLC+DREGLRDGLLAGLMVPATGTFEPGHPWRGNP+FQIKYD PAA Sbjct: 310 EGSPWNDIRVRRAANLCIDREGLRDGLLAGLMVPATGTFEPGHPWRGNPSFQIKYDLPAA 369 Query: 367 QKLMQEAGFGPNKKLTVKIQTSASGSGQMLPLPMNEYLQQALAECYFDVQLDVIEWNTLF 426 QKLM+EAGFGP+KKL+VK+QTSASGSGQMLPLPMNEYLQQALAECYFDV+LDVIEWNTLF Sbjct: 370 QKLMKEAGFGPDKKLSVKVQTSASGSGQMLPLPMNEYLQQALAECYFDVKLDVIEWNTLF 429 Query: 427 TNWRRGTKDPTANGSNAINVTYAAMDPFFALVRFLQSGMAPPVSNNWGFNNNPKFDELVK 486 TNWRRG KDP+ANGSNA NVTYAAMDPFFALVRFLQS MAPPVSNNWG+ NNPKFDELVK Sbjct: 430 TNWRRGVKDPSANGSNATNVTYAAMDPFFALVRFLQSSMAPPVSNNWGYINNPKFDELVK 489 Query: 487 KARQTFEPAARDAALAELHAASVDDAAFLYVAHDVAPRAMSPKVKGFVQPKSWFVDFSPV 546 KAR +F+ A RD ALAEL+AAS+DDAAFLYVAHDV PRAMSPKVKGFVQPKSWFVDFSPV Sbjct: 490 KARTSFDAAERDKALAELNAASIDDAAFLYVAHDVGPRAMSPKVKGFVQPKSWFVDFSPV 549 Query: 547 TVAP 550 ++AP Sbjct: 550 SMAP 553