BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0048.p (322 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774558.1| ABC transporter ATP-binding protein [Bradyrhizo... 580 e-164 ref|YP_483844.1| oligopeptide/dipeptide ABC transporter, ATP-bin... 580 e-163 ref|YP_001242935.1| putative oligopeptide ABC transporter ATP-bi... 570 e-160 ref|YP_531097.1| oligopeptide/dipeptide ABC transporter ATP-bind... 568 e-160 ref|YP_001203061.1| putative oligopeptide ABC transporter ATP-bi... 566 e-159 >ref|NP_774558.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC53183.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 344 Score = 580 bits (1496), Expect = e-164, Method: Compositional matrix adjust. Identities = 280/314 (89%), Positives = 296/314 (94%) Query: 1 VRGGLFSPRKTVRAVDDVTFAVMKGETVGIVGESGCGKSTTARLLMHLMARDAGDIIYDG 60 VRGGLF+ ++TVRAVD+V+F+V KGETVGIVGESGCGKSTTARLLMHLM RD GDIIYDG Sbjct: 27 VRGGLFAAKRTVRAVDNVSFSVAKGETVGIVGESGCGKSTTARLLMHLMPRDTGDIIYDG 86 Query: 61 RQVGPSLSLRDLRRGVQMVFQDSYASLNPRLTIEESIAFGPKVHGMADDTARTLARELLG 120 VG +LSLR+LRRG+QMVFQDSYASLNPRLTIEESIAFGPKVHGMAD TAR LARELLG Sbjct: 87 MTVGQALSLRELRRGMQMVFQDSYASLNPRLTIEESIAFGPKVHGMADGTARALARELLG 146 Query: 121 KVGLRPEIFANRYPHEVSGGQRQRIAIARALALSPRLVILDEAVSALDKSVEAQVLNLLA 180 KVGLRPE FANRYPHE+SGGQRQR+ IARALALSPRLVILDEAVSALDKSVEAQVLNLLA Sbjct: 147 KVGLRPENFANRYPHEISGGQRQRVNIARALALSPRLVILDEAVSALDKSVEAQVLNLLA 206 Query: 181 DLKREFGLTYLFISHDLNVVRYISDRVLVMYLGEVVELGPVDAVWDAPAHPYTRALLAAM 240 DLKREFGLTYLFISHDLNVVRYISDRVLVMYLGEVVELGPVD VWD PAHPYTRALLAAM Sbjct: 207 DLKREFGLTYLFISHDLNVVRYISDRVLVMYLGEVVELGPVDQVWDQPAHPYTRALLAAM 266 Query: 241 PSSDPDKRTEVPPISGDPPNPIDPPSGCRFHTRCPFAEPLCANGTPKLSDLDTMGHQAAC 300 PSSDPD+RTE PPI+GDPPNPIDPPSGCRFHTRC FAEPLCAN PKL+ +DTMGH+AAC Sbjct: 267 PSSDPDRRTEKPPITGDPPNPIDPPSGCRFHTRCAFAEPLCANAAPKLTAVDTMGHEAAC 326 Query: 301 YMAIPGSGHSRAPA 314 YMAIPGSGHSRAPA Sbjct: 327 YMAIPGSGHSRAPA 340 >ref|YP_483844.1| oligopeptide/dipeptide ABC transporter, ATP-binding protein-like [Rhodopseudomonas palustris HaA2] gb|ABD04933.1| Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like [Rhodopseudomonas palustris HaA2] Length = 354 Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust. Identities = 284/313 (90%), Positives = 292/313 (93%) Query: 1 VRGGLFSPRKTVRAVDDVTFAVMKGETVGIVGESGCGKSTTARLLMHLMARDAGDIIYDG 60 VRGGLFS KTVRAVDDV+FA+ KGETVGIVGESGCGKSTTARLLMHLM R+AGDIIYDG Sbjct: 36 VRGGLFSAAKTVRAVDDVSFAIAKGETVGIVGESGCGKSTTARLLMHLMPRNAGDIIYDG 95 Query: 61 RQVGPSLSLRDLRRGVQMVFQDSYASLNPRLTIEESIAFGPKVHGMADDTARTLARELLG 120 R VG LSLR+LRRG+QMVFQDSYASLNPRLTIEESIAFGPKVHGMAD TAR LARELLG Sbjct: 96 RAVGRELSLRELRRGMQMVFQDSYASLNPRLTIEESIAFGPKVHGMADGTARALARELLG 155 Query: 121 KVGLRPEIFANRYPHEVSGGQRQRIAIARALALSPRLVILDEAVSALDKSVEAQVLNLLA 180 KVGLRPE FANRYPHEVSGGQRQR+ IARALALSPRLVILDEAVSALDKSVEAQVLNLL Sbjct: 156 KVGLRPENFANRYPHEVSGGQRQRVNIARALALSPRLVILDEAVSALDKSVEAQVLNLLV 215 Query: 181 DLKREFGLTYLFISHDLNVVRYISDRVLVMYLGEVVELGPVDAVWDAPAHPYTRALLAAM 240 DLKREFGLTYLFISHDLNVVRYISDRVLVMYLGEVVELGPVD VWD PAHPYTRALLAAM Sbjct: 216 DLKREFGLTYLFISHDLNVVRYISDRVLVMYLGEVVELGPVDKVWDQPAHPYTRALLAAM 275 Query: 241 PSSDPDKRTEVPPISGDPPNPIDPPSGCRFHTRCPFAEPLCANGTPKLSDLDTMGHQAAC 300 PSSDPD+RTEVPPISGDPPNPIDPPSGCRFHTRCPFAEPLC PKL+ LD GHQAAC Sbjct: 276 PSSDPDRRTEVPPISGDPPNPIDPPSGCRFHTRCPFAEPLCGGDAPKLTALDPSGHQAAC 335 Query: 301 YMAIPGSGHSRAP 313 YMAIPGSGHSRAP Sbjct: 336 YMAIPGSGHSRAP 348 >ref|YP_001242935.1| putative oligopeptide ABC transporter ATP-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ39029.1| Putative oligopeptide ABC transporter (ATP-binding protein) [Bradyrhizobium sp. BTAi1] Length = 349 Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust. Identities = 276/314 (87%), Positives = 293/314 (93%) Query: 1 VRGGLFSPRKTVRAVDDVTFAVMKGETVGIVGESGCGKSTTARLLMHLMARDAGDIIYDG 60 VRGGLF RKTVRAVDDV+F + KGETVGIVGESGCGKSTTARLLMHLM RDAG+II+DG Sbjct: 35 VRGGLFGARKTVRAVDDVSFNIGKGETVGIVGESGCGKSTTARLLMHLMDRDAGEIIFDG 94 Query: 61 RQVGPSLSLRDLRRGVQMVFQDSYASLNPRLTIEESIAFGPKVHGMADDTARTLARELLG 120 RQVG ++LR+LRRG+QMVFQDSYASLNPRLTIEESIAFGPKVHGMAD AR LARELLG Sbjct: 95 RQVGHEMTLRELRRGMQMVFQDSYASLNPRLTIEESIAFGPKVHGMADGAARALARELLG 154 Query: 121 KVGLRPEIFANRYPHEVSGGQRQRIAIARALALSPRLVILDEAVSALDKSVEAQVLNLLA 180 KVGLRPEIFANRYPHE+SGGQRQR+ IARALALSPRLVILDEAVSALDKSVEAQVLNLL Sbjct: 155 KVGLRPEIFANRYPHEISGGQRQRVNIARALALSPRLVILDEAVSALDKSVEAQVLNLLM 214 Query: 181 DLKREFGLTYLFISHDLNVVRYISDRVLVMYLGEVVELGPVDAVWDAPAHPYTRALLAAM 240 DLKREFGLTYLFISHDLNVV YISDRVLVMYLGEVVELGPV+ VW PAHPYTRALLAAM Sbjct: 215 DLKREFGLTYLFISHDLNVVHYISDRVLVMYLGEVVELGPVEQVWARPAHPYTRALLAAM 274 Query: 241 PSSDPDKRTEVPPISGDPPNPIDPPSGCRFHTRCPFAEPLCANGTPKLSDLDTMGHQAAC 300 PSSDPD+RTEVPPISGDPPNPIDPP+GCRFHTRCPFAE LC+N P L++LDTMGHQAAC Sbjct: 275 PSSDPDRRTEVPPISGDPPNPIDPPAGCRFHTRCPFAEALCSNIAPGLTELDTMGHQAAC 334 Query: 301 YMAIPGSGHSRAPA 314 +MAIP SGHSRAPA Sbjct: 335 HMAIPRSGHSRAPA 348 >ref|YP_531097.1| oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein [Rhodopseudomonas palustris BisB18] gb|ABD86778.1| Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like [Rhodopseudomonas palustris BisB18] Length = 362 Score = 568 bits (1465), Expect = e-160, Method: Compositional matrix adjust. Identities = 274/320 (85%), Positives = 293/320 (91%) Query: 1 VRGGLFSPRKTVRAVDDVTFAVMKGETVGIVGESGCGKSTTARLLMHLMARDAGDIIYDG 60 VRGGLF+P KTVRAVDDV+FA+ KGET+GIVGESGCGKSTTARLLMHLM G+II+D Sbjct: 39 VRGGLFAPSKTVRAVDDVSFAIAKGETLGIVGESGCGKSTTARLLMHLMPTTGGEIIFDA 98 Query: 61 RQVGPSLSLRDLRRGVQMVFQDSYASLNPRLTIEESIAFGPKVHGMADDTARTLARELLG 120 RQVG LSLR+LRRG+QMVFQDSYASLNPRLTIEESIAFGPKVHGM D +RTLARELLG Sbjct: 99 RQVGRQLSLRELRRGMQMVFQDSYASLNPRLTIEESIAFGPKVHGMDDAASRTLARELLG 158 Query: 121 KVGLRPEIFANRYPHEVSGGQRQRIAIARALALSPRLVILDEAVSALDKSVEAQVLNLLA 180 KVGLRPE FANRYPHE+SGGQRQR+ IARALALSPRLVILDEAVSALDKSVEAQVLNLL Sbjct: 159 KVGLRPENFANRYPHEISGGQRQRVNIARALALSPRLVILDEAVSALDKSVEAQVLNLLV 218 Query: 181 DLKREFGLTYLFISHDLNVVRYISDRVLVMYLGEVVELGPVDAVWDAPAHPYTRALLAAM 240 DLKREFGLTYLFISHDLNVVRYISDRVLVMYLGEVVE+GPVD VWD PAHPYTRALLAAM Sbjct: 219 DLKREFGLTYLFISHDLNVVRYISDRVLVMYLGEVVEVGPVDEVWDQPAHPYTRALLAAM 278 Query: 241 PSSDPDKRTEVPPISGDPPNPIDPPSGCRFHTRCPFAEPLCANGTPKLSDLDTMGHQAAC 300 PSSDPD+RT+VPPI+GDPPNPIDPP+GCRFH RCPFAEPLC TPKL++L+ GHQAAC Sbjct: 279 PSSDPDRRTQVPPITGDPPNPIDPPAGCRFHPRCPFAEPLCDGATPKLTELNPSGHQAAC 338 Query: 301 YMAIPGSGHSRAPAKAKGEN 320 YMAIPGSGHSRAPAK N Sbjct: 339 YMAIPGSGHSRAPAKEVQNN 358 >ref|YP_001203061.1| putative oligopeptide ABC transporter ATP-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL74824.1| Putative oligopeptide ABC transporter (ATP-binding protein) [Bradyrhizobium sp. ORS 278] Length = 349 Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust. Identities = 274/314 (87%), Positives = 291/314 (92%) Query: 1 VRGGLFSPRKTVRAVDDVTFAVMKGETVGIVGESGCGKSTTARLLMHLMARDAGDIIYDG 60 VRGGLF RKTVRAVDDV+F + KGETVGIVGESGCGKSTTARLLMHLM RDAG+II+DG Sbjct: 35 VRGGLFGARKTVRAVDDVSFNIGKGETVGIVGESGCGKSTTARLLMHLMERDAGEIIFDG 94 Query: 61 RQVGPSLSLRDLRRGVQMVFQDSYASLNPRLTIEESIAFGPKVHGMADDTARTLARELLG 120 RQVG +SLR+LRRG+QMVFQDSYASLNPRLTIEESIAFGPKVHGMAD AR LARELLG Sbjct: 95 RQVGHEISLRELRRGMQMVFQDSYASLNPRLTIEESIAFGPKVHGMADGAARALARELLG 154 Query: 121 KVGLRPEIFANRYPHEVSGGQRQRIAIARALALSPRLVILDEAVSALDKSVEAQVLNLLA 180 KVGLR EIFANRYPHE+SGGQRQR+ IARALALSPRLVILDEAVSALDKSVEAQVLNLL Sbjct: 155 KVGLRHEIFANRYPHEISGGQRQRVNIARALALSPRLVILDEAVSALDKSVEAQVLNLLT 214 Query: 181 DLKREFGLTYLFISHDLNVVRYISDRVLVMYLGEVVELGPVDAVWDAPAHPYTRALLAAM 240 DLKREFGLTYLFISHDLNV+ YISDRVLVMYLGEVVELGPV+ VW PAHPYTRALLAAM Sbjct: 215 DLKREFGLTYLFISHDLNVINYISDRVLVMYLGEVVELGPVEQVWAKPAHPYTRALLAAM 274 Query: 241 PSSDPDKRTEVPPISGDPPNPIDPPSGCRFHTRCPFAEPLCANGTPKLSDLDTMGHQAAC 300 PSSDPD+RTE PP+SGDPPNPIDPPSGCRFHTRCPFAE CAN P+L++LDTMGHQAAC Sbjct: 275 PSSDPDRRTEQPPLSGDPPNPIDPPSGCRFHTRCPFAEAPCANVAPRLTELDTMGHQAAC 334 Query: 301 YMAIPGSGHSRAPA 314 +MAI GSGHSRAPA Sbjct: 335 HMAISGSGHSRAPA 348