BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0045.p         (206 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_531094.1| oligopeptide/dipeptide ABC transporter ATP-bind...   300   1e-79
ref|YP_483841.1| oligopeptide/dipeptide ABC transporter, ATP-bin...   293   1e-77
ref|YP_004107171.1| oligopeptide/dipeptide ABC transporter ATPas...   291   4e-77
ref|NP_946108.1| putative oligopeptide ABC transporter ATP-bindi...   290   6e-77
ref|YP_001203064.1| putative oligopeptide ABC transporter ATP-bi...   290   9e-77

>ref|YP_531094.1| oligopeptide/dipeptide ABC transporter ATP-binding protein-like
           protein [Rhodopseudomonas palustris BisB18]
 gb|ABD86775.1| Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like
           [Rhodopseudomonas palustris BisB18]
          Length = 341

 Score =  300 bits (767), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 145/164 (88%), Positives = 156/164 (95%)

Query: 1   MTNLVEIDNLNIRFTGDRTVHAVNDLSLQLGEGEVLGLLGESGSGKSVTLRALMRLLPKK 60
           M+NLVE+ NLNIRFTG+RTVHAVNDLSL LGEGEVLGLLGESGSGKSVTLRALMRLLP K
Sbjct: 1   MSNLVEVKNLNIRFTGERTVHAVNDLSLSLGEGEVLGLLGESGSGKSVTLRALMRLLPNK 60

Query: 61  RTQISGSVKVLGQQVLAMDDEALSAFRGQTVSMIFQEPALALDPVYTIGRQIAETVMRHE 120
           RTQISG+V VLGQ VLA+DD+ LSAFRGQTVSMIFQEPALALDPVYTIGRQIAE+VMRHE
Sbjct: 61  RTQISGTVNVLGQDVLALDDDGLSAFRGQTVSMIFQEPALALDPVYTIGRQIAESVMRHE 120

Query: 121 GKSEREATARALEMLEVVRIPSAKRRLDSYPHEMSGGMRQRAMM 164
           GKS+ EA ARAL+MLEVVRIPSAKRRLD+YPHEMSGGMRQRAM+
Sbjct: 121 GKSQTEAMARALQMLEVVRIPSAKRRLDAYPHEMSGGMRQRAMI 164


>ref|YP_483841.1| oligopeptide/dipeptide ABC transporter, ATP-binding protein-like
           [Rhodopseudomonas palustris HaA2]
 gb|ABD04930.1| Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like
           [Rhodopseudomonas palustris HaA2]
          Length = 325

 Score =  293 bits (749), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 142/164 (86%), Positives = 157/164 (95%)

Query: 1   MTNLVEIDNLNIRFTGDRTVHAVNDLSLQLGEGEVLGLLGESGSGKSVTLRALMRLLPKK 60
           M+NLVE+ +LNIRFTG+RTVHAVN+LSL LGEGEVLGLLGESGSGKSVTLRALMRLLPKK
Sbjct: 1   MSNLVEVRDLNIRFTGERTVHAVNNLSLSLGEGEVLGLLGESGSGKSVTLRALMRLLPKK 60

Query: 61  RTQISGSVKVLGQQVLAMDDEALSAFRGQTVSMIFQEPALALDPVYTIGRQIAETVMRHE 120
           RTQISG V+V+G+ VLA+DD+ALS FRGQ VSMIFQEPALALDPVYTIG QIAETVMRHE
Sbjct: 61  RTQISGRVEVMGRDVLALDDDALSNFRGQAVSMIFQEPALALDPVYTIGHQIAETVMRHE 120

Query: 121 GKSEREATARALEMLEVVRIPSAKRRLDSYPHEMSGGMRQRAMM 164
           GKS+++ATARALEMLEVVRIPSAKRRLD+YPHEMSGGMRQRAM+
Sbjct: 121 GKSQQDATARALEMLEVVRIPSAKRRLDAYPHEMSGGMRQRAMI 164


>ref|YP_004107171.1| oligopeptide/dipeptide ABC transporter ATPase subunit
           [Rhodopseudomonas palustris DX-1]
 gb|ADU42438.1| oligopeptide/dipeptide ABC transporter, ATPase subunit
           [Rhodopseudomonas palustris DX-1]
          Length = 325

 Score =  291 bits (745), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 139/164 (84%), Positives = 157/164 (95%)

Query: 1   MTNLVEIDNLNIRFTGDRTVHAVNDLSLQLGEGEVLGLLGESGSGKSVTLRALMRLLPKK 60
           M+NLVEI +LN+RFTG+RTV+A+NDL+L LG+GEVLGLLGESGSGKSVTLRALMRLLPKK
Sbjct: 1   MSNLVEIRDLNVRFTGERTVYAINDLNLSLGQGEVLGLLGESGSGKSVTLRALMRLLPKK 60

Query: 61  RTQISGSVKVLGQQVLAMDDEALSAFRGQTVSMIFQEPALALDPVYTIGRQIAETVMRHE 120
           RT I+GS++V GQ VLA+DDEALS FRGQTVSMIFQEPALALDPVYT+G+QIAE+VMRHE
Sbjct: 61  RTAITGSIRVAGQDVLALDDEALSTFRGQTVSMIFQEPALALDPVYTVGQQIAESVMRHE 120

Query: 121 GKSEREATARALEMLEVVRIPSAKRRLDSYPHEMSGGMRQRAMM 164
           GKS+REA ARALEMLEVVRIPSAKRRLD+YPHEMSGGMRQRAM+
Sbjct: 121 GKSKREAMARALEMLEVVRIPSAKRRLDAYPHEMSGGMRQRAMI 164


>ref|NP_946108.1| putative oligopeptide ABC transporter ATP-binding protein
           [Rhodopseudomonas palustris CGA009]
 ref|YP_001989859.1| oligopeptide/dipeptide ABC transporter ATPase [Rhodopseudomonas
           palustris TIE-1]
 emb|CAE26199.1| putative oligopeptide ABC transporter, ATP-binding component
           [Rhodopseudomonas palustris CGA009]
 gb|ACE99383.1| oligopeptide/dipeptide ABC transporter, ATPase subunit
           [Rhodopseudomonas palustris TIE-1]
          Length = 325

 Score =  290 bits (743), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 139/164 (84%), Positives = 157/164 (95%)

Query: 1   MTNLVEIDNLNIRFTGDRTVHAVNDLSLQLGEGEVLGLLGESGSGKSVTLRALMRLLPKK 60
           M+NLV+I +LN+RFTG+RTV+A+NDL+L LG+GEVLGLLGESGSGKSVTLRALMRLLPKK
Sbjct: 1   MSNLVDIRDLNVRFTGERTVYAINDLNLTLGQGEVLGLLGESGSGKSVTLRALMRLLPKK 60

Query: 61  RTQISGSVKVLGQQVLAMDDEALSAFRGQTVSMIFQEPALALDPVYTIGRQIAETVMRHE 120
           RT ISGS++V GQ VLA+DDEALS FRGQTVSMIFQEPALALDPVYT+G+QIAE+VMRHE
Sbjct: 61  RTAISGSIRVAGQDVLALDDEALSTFRGQTVSMIFQEPALALDPVYTVGQQIAESVMRHE 120

Query: 121 GKSEREATARALEMLEVVRIPSAKRRLDSYPHEMSGGMRQRAMM 164
           GKS+REA ARALEMLEVVRIPSAKRRLD+YPHEMSGGMRQRAM+
Sbjct: 121 GKSQREAMARALEMLEVVRIPSAKRRLDAYPHEMSGGMRQRAMI 164


>ref|YP_001203064.1| putative oligopeptide ABC transporter ATP-binding protein
           [Bradyrhizobium sp. ORS 278]
 emb|CAL74827.1| Putative oligopeptide ABC transporter (ATP-binding protein)
           [Bradyrhizobium sp. ORS 278]
          Length = 326

 Score =  290 bits (742), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 142/164 (86%), Positives = 153/164 (93%)

Query: 1   MTNLVEIDNLNIRFTGDRTVHAVNDLSLQLGEGEVLGLLGESGSGKSVTLRALMRLLPKK 60
           MTNLVEI NL+IRFTG+RTVHAVND+SL LG+GEVLGLLGESGSGKSVT+RALMRLLPKK
Sbjct: 1   MTNLVEISNLSIRFTGERTVHAVNDVSLSLGDGEVLGLLGESGSGKSVTMRALMRLLPKK 60

Query: 61  RTQISGSVKVLGQQVLAMDDEALSAFRGQTVSMIFQEPALALDPVYTIGRQIAETVMRHE 120
           RTQISG VKV+G+ +LAM DE LS FRG+TVSMIFQEP LALDPVYTIGRQIAETVMRHE
Sbjct: 61  RTQISGGVKVMGRDILAMSDEELSQFRGRTVSMIFQEPGLALDPVYTIGRQIAETVMRHE 120

Query: 121 GKSEREATARALEMLEVVRIPSAKRRLDSYPHEMSGGMRQRAMM 164
           GKS  E TARALEML+VVRIPSAKRRLDSYPHEMSGGMRQRAM+
Sbjct: 121 GKSYAEGTARALEMLDVVRIPSAKRRLDSYPHEMSGGMRQRAMI 164