BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0044.p         (121 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774556.1| ABC transporter ATP-binding protein [Bradyrhizo...   205   2e-51
ref|YP_001203064.1| putative oligopeptide ABC transporter ATP-bi...   205   2e-51
ref|YP_531094.1| oligopeptide/dipeptide ABC transporter ATP-bind...   204   5e-51
ref|NP_946108.1| putative oligopeptide ABC transporter ATP-bindi...   197   3e-49
ref|YP_004107171.1| oligopeptide/dipeptide ABC transporter ATPas...   197   4e-49

>ref|NP_774556.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA
           110]
 dbj|BAC53181.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA
           110]
          Length = 324

 Score =  205 bits (522), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 98/120 (81%), Positives = 106/120 (88%)

Query: 1   MSVIFVTHDIGVAIEICDRVAVMYAGQIVEQGALRDIVRSPVHPYAKGLLASTIHGAMRG 60
           MSVIFVTHDIGVAIEICDRVAVMYAGQIVEQG LRDIVR+PVHPYAKGLLASTIHGA RG
Sbjct: 205 MSVIFVTHDIGVAIEICDRVAVMYAGQIVEQGTLRDIVRTPVHPYAKGLLASTIHGAKRG 264

Query: 61  QRLETIPGTPPSLDHAPASCSFAPRCKFAEPRCSERLPPVVQVAPGRLARCILAEPASAT 120
           QRLETIPGTPPSL   P +CSFAPRC  A+PRC E+LP  V+V PGR ARC+LAEP +A+
Sbjct: 265 QRLETIPGTPPSLAEKPHNCSFAPRCAAAQPRCLEQLPANVEVGPGRAARCVLAEPVTAS 324


>ref|YP_001203064.1| putative oligopeptide ABC transporter ATP-binding protein
           [Bradyrhizobium sp. ORS 278]
 emb|CAL74827.1| Putative oligopeptide ABC transporter (ATP-binding protein)
           [Bradyrhizobium sp. ORS 278]
          Length = 326

 Score =  205 bits (521), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 96/114 (84%), Positives = 103/114 (90%)

Query: 1   MSVIFVTHDIGVAIEICDRVAVMYAGQIVEQGALRDIVRSPVHPYAKGLLASTIHGAMRG 60
           MSVIFVTHDIGVAIEICDRVAVMYAGQIVEQG+LRDIVR PVHPYA+GLLASTIHG  RG
Sbjct: 205 MSVIFVTHDIGVAIEICDRVAVMYAGQIVEQGSLRDIVRQPVHPYARGLLASTIHGPKRG 264

Query: 61  QRLETIPGTPPSLDHAPASCSFAPRCKFAEPRCSERLPPVVQVAPGRLARCILA 114
           +RL+TIPGTPPSLD AP SCSFAPRC  A+PRCSE LPP VQ+ P RLARC+LA
Sbjct: 265 ERLQTIPGTPPSLDQAPRSCSFAPRCSLAQPRCSETLPPAVQLGPQRLARCVLA 318


>ref|YP_531094.1| oligopeptide/dipeptide ABC transporter ATP-binding protein-like
           protein [Rhodopseudomonas palustris BisB18]
 gb|ABD86775.1| Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like
           [Rhodopseudomonas palustris BisB18]
          Length = 341

 Score =  204 bits (518), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 95/116 (81%), Positives = 104/116 (89%)

Query: 1   MSVIFVTHDIGVAIEICDRVAVMYAGQIVEQGALRDIVRSPVHPYAKGLLASTIHGAMRG 60
           MSVIFVTHDIGVAIEICDRVAVMYAGQIVEQG L  IVR+P+HPYA+GLLAST+HGA RG
Sbjct: 205 MSVIFVTHDIGVAIEICDRVAVMYAGQIVEQGTLSQIVRTPLHPYAQGLLASTVHGAKRG 264

Query: 61  QRLETIPGTPPSLDHAPASCSFAPRCKFAEPRCSERLPPVVQVAPGRLARCILAEP 116
            RLETIPGTPPSLD AP++CSFAPRC++A+PRC E LPP VQV P R ARCILAEP
Sbjct: 265 ARLETIPGTPPSLDKAPSACSFAPRCRYAQPRCVEALPPDVQVGPNRTARCILAEP 320


>ref|NP_946108.1| putative oligopeptide ABC transporter ATP-binding protein
           [Rhodopseudomonas palustris CGA009]
 ref|YP_001989859.1| oligopeptide/dipeptide ABC transporter ATPase [Rhodopseudomonas
           palustris TIE-1]
 emb|CAE26199.1| putative oligopeptide ABC transporter, ATP-binding component
           [Rhodopseudomonas palustris CGA009]
 gb|ACE99383.1| oligopeptide/dipeptide ABC transporter, ATPase subunit
           [Rhodopseudomonas palustris TIE-1]
          Length = 325

 Score =  197 bits (502), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 93/118 (78%), Positives = 102/118 (86%)

Query: 1   MSVIFVTHDIGVAIEICDRVAVMYAGQIVEQGALRDIVRSPVHPYAKGLLASTIHGAMRG 60
           MSVIFVTHDIGVAIEICDRVAVMYAGQ +EQG+LRDIVR P HPYA+GLLAST+HGA RG
Sbjct: 205 MSVIFVTHDIGVAIEICDRVAVMYAGQTIEQGSLRDIVRDPQHPYAQGLLASTVHGAKRG 264

Query: 61  QRLETIPGTPPSLDHAPASCSFAPRCKFAEPRCSERLPPVVQVAPGRLARCILAEPAS 118
            RLETIPG PPSLD  P +CSFAPRC  A+PRCS  LPP V + PGR+ARCILAEPA+
Sbjct: 265 ARLETIPGAPPSLDTKPVACSFAPRCAHAQPRCSAGLPPEVALGPGRMARCILAEPAA 322


>ref|YP_004107171.1| oligopeptide/dipeptide ABC transporter ATPase subunit
           [Rhodopseudomonas palustris DX-1]
 gb|ADU42438.1| oligopeptide/dipeptide ABC transporter, ATPase subunit
           [Rhodopseudomonas palustris DX-1]
          Length = 325

 Score =  197 bits (502), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 93/118 (78%), Positives = 102/118 (86%)

Query: 1   MSVIFVTHDIGVAIEICDRVAVMYAGQIVEQGALRDIVRSPVHPYAKGLLASTIHGAMRG 60
           MSVIFVTHDIGVAIEICDRVAVMYAGQ +EQG+LRDIVR P HPYA+GLLAST+HGA RG
Sbjct: 205 MSVIFVTHDIGVAIEICDRVAVMYAGQTIEQGSLRDIVREPQHPYAQGLLASTVHGAKRG 264

Query: 61  QRLETIPGTPPSLDHAPASCSFAPRCKFAEPRCSERLPPVVQVAPGRLARCILAEPAS 118
            RLETIPG PPSLD  P +CSFAPRC  A+PRCS  LPP V + PGR+ARCILAEPA+
Sbjct: 265 ARLETIPGAPPSLDAKPVACSFAPRCAHAQPRCSAGLPPEVALGPGRMARCILAEPAA 322