BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0037.p (369 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774547.1| hypothetical protein bll7907 [Bradyrhizobium ja... 667 0.0 ref|YP_001240220.1| hypothetical protein BBta_4262 [Bradyrhizobi... 379 e-103 ref|NP_774250.1| hypothetical protein bll7610 [Bradyrhizobium ja... 367 2e-99 ref|ZP_08628890.1| hypothetical protein CSIRO_1975 [Bradyrhizobi... 363 3e-98 ref|NP_085765.1| hypothetical protein mlr9222 [Mesorhizobium lot... 320 2e-85 >ref|NP_774547.1| hypothetical protein bll7907 [Bradyrhizobium japonicum USDA 110] dbj|BAC53172.1| bll7907 [Bradyrhizobium japonicum USDA 110] Length = 369 Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/368 (84%), Positives = 336/368 (91%) Query: 1 MNIQLRERPETASPTGVKTAIADCDIHPARATKDELYPYLEKRWHAHLETFGVHAYQGMM 60 MNIQ RE E ASP KTAIADCDIHPARAT+ ELYPYL KRW HLE +GVHAYQGMM Sbjct: 1 MNIQFRESTEAASPLTTKTAIADCDIHPARATRTELYPYLAKRWQHHLEVYGVHAYQGMM 60 Query: 61 EGPPYPKAQPNASRRDAYPPEGGPQGSSLSFMQKQHLDPNNVALGVLNPLNTGQGIRNQD 120 EGPPYPKAQPNASRRDAYPPEGGPQGSSLSFMQKQ LDPNNV LGVLNPLN GQGIRN + Sbjct: 61 EGPPYPKAQPNASRRDAYPPEGGPQGSSLSFMQKQLLDPNNVQLGVLNPLNAGQGIRNHE 120 Query: 121 LAGAICSAINDWQIEKWTSKDSRLKGSVVVANEDGMSAAAEIRKRAGDKNFVQVLLLSRN 180 L+ A+CSAINDWQI+KWTSKD RLK S+VV NEDG+SAAAEIR+RAGDKNFVQVLLLSRN Sbjct: 121 LSAALCSAINDWQIDKWTSKDKRLKASIVVGNEDGLSAAAEIRERAGDKNFVQVLLLSRN 180 Query: 181 VEPLGQRRYWPIYEAAQDAGLPIGVHAFGFGGNPITASGWPSYYIEEMVGHSQCQQTALA 240 VEPLGQRRYWPIY+AA++AGLP+GVHAFGFGGNPIT SGWPSYYIEEMVGHSQCQQ+ALA Sbjct: 181 VEPLGQRRYWPIYQAAEEAGLPVGVHAFGFGGNPITPSGWPSYYIEEMVGHSQCQQSALA 240 Query: 241 SLVLEGVFERFPKLKMVMVEAGFGWAPSLAWRLDKVFSRLHAEVPHLKRKPSEYIRDHIW 300 SLVLEGVFERFPKLKMVM+EAGFGWAPSLAWRLDK + RL +EVPH+KR PSEYIR+ +W Sbjct: 241 SLVLEGVFERFPKLKMVMIEAGFGWAPSLAWRLDKAWQRLRSEVPHVKRPPSEYIREQVW 300 Query: 301 WTTQPMEDPESRDHLFQTIEWIGWDRLLFATDYPHWDYDEPSRVLPAGVSDANRQAFYLD 360 WTTQPMEDPE R+ LF I+WIGWDRLLFATDYPHWDYDEPSR+LPAGVSD NR+AFYL Sbjct: 301 WTTQPMEDPERREDLFDVIKWIGWDRLLFATDYPHWDYDEPSRILPAGVSDTNREAFYLG 360 Query: 361 NARQLYGI 368 NAR+LYGI Sbjct: 361 NARKLYGI 368 >ref|YP_001240220.1| hypothetical protein BBta_4262 [Bradyrhizobium sp. BTAi1] gb|ABQ36314.1| hypothetical protein BBta_4262 [Bradyrhizobium sp. BTAi1] Length = 365 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 183/371 (49%), Positives = 243/371 (65%), Gaps = 8/371 (2%) Query: 1 MNIQLRERPETASPTGVKTAIADCDIHPARATKDELYPYLEKRWHAHLETFGVHAYQGMM 60 MN RE+ + A+ DCDIHPA T EL PYLE RW H +T+GVH Q + Sbjct: 1 MNAPFREQQARQT-----LAVVDCDIHPAHRTPGELLPYLEPRWREHYQTYGVHVRQALS 55 Query: 61 EGPPYPKAQPNASRRDAYPPEGGPQGSSLSFMQKQHLDPNNVALGVLNPLNTG-QGIRNQ 119 YP+ R DA P GP GS L +++QHLDP NV G+L L+ G RN Sbjct: 56 STLMYPRMMAAGMRSDALP-ASGPAGSDLDMLRRQHLDPVNVEFGLLMALSKGGMEERNP 114 Query: 120 DLAGAICSAINDWQIEKWTSKDSRLKGSVVVANEDGMSAAAEIRKRAGDKNFVQVLLLSR 179 + A A+ A NDWQI++W ++ RL+ +VV E +A AEI + A D+ +VQ++L SR Sbjct: 115 EFAAAMSRATNDWQIDRWVRQEPRLRAGIVVPQEFPEAAVAEIERCAADRRYVQIMLSSR 174 Query: 180 NVEPLGQRRYWPIYEAAQDAGLPIGVHAFGF-GGNPITASGWPSYYIEEMVGHSQCQQTA 238 +PLG RYWPIY AA+ AGLPIG+H G+ GG+P T SGWP+YY++E C ++ Sbjct: 175 PSDPLGHPRYWPIYAAAERAGLPIGLHPVGYNGGHPSTGSGWPTYYLQEHYVFVACMESL 234 Query: 239 LASLVLEGVFERFPKLKMVMVEAGFGWAPSLAWRLDKVFSRLHAEVPHLKRKPSEYIRDH 298 AS +L GVFERFP LK+V+VE GF WAP+LAWR+DK F + EVPHLK++PS+Y+R H Sbjct: 235 AASFILGGVFERFPGLKVVLVEGGFAWAPALAWRMDKHFDKFRKEVPHLKQRPSDYLRRH 294 Query: 299 IWWTTQPMEDPESRDHLFQTIEWIGWDRLLFATDYPHWDYDEPSRVLPAGVSDANRQAFY 358 IWWTTQP+E+PE HL + I+WIGWDRLL+++DYPHWDYD PS +++A R+ + Sbjct: 295 IWWTTQPIEEPEQARHLTEIIDWIGWDRLLYSSDYPHWDYDNPSFSFKFPMTEAQRRQIF 354 Query: 359 LDNARQLYGIA 369 DNA LY ++ Sbjct: 355 RDNAMALYRLS 365 >ref|NP_774250.1| hypothetical protein bll7610 [Bradyrhizobium japonicum USDA 110] dbj|BAC52875.1| bll7610 [Bradyrhizobium japonicum USDA 110] Length = 392 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 170/355 (47%), Positives = 233/355 (65%), Gaps = 1/355 (0%) Query: 13 SPTGVKTAIADCDIHPARATKDELYPYLEKRWHAHLETFGVHAYQGMMEGPPYPKAQPNA 72 P + I DCD+HP+ + D+L +L KRW HL+ +G H + PYP++ P Sbjct: 36 KPAASRLRIVDCDVHPSLRSTDDLNEFLPKRWQQHLKEYGSHLRTPYLFTTPYPRSSPLI 95 Query: 73 SRRDAYPPEGGPQGSSLSFMQKQHLDPNNVALGVLNPLNTGQ-GIRNQDLAGAICSAIND 131 +RRDA+PP GGP GS L FM+KQHLDP +V G+L L+ +N + AI AIND Sbjct: 96 ARRDAWPPTGGPPGSDLDFMRKQHLDPLDVEFGILQVLDLFIFSQQNLEFGAAIQRAIND 155 Query: 132 WQIEKWTSKDSRLKGSVVVANEDGMSAAAEIRKRAGDKNFVQVLLLSRNVEPLGQRRYWP 191 WQ+ W+ +D RLK S++V + A AEI + A ++Q+ + R EPLG+RRYWP Sbjct: 156 WQLAFWSHRDPRLKASILVGQDGNELAIAEIERCAKVGEYIQINVSPRANEPLGRRRYWP 215 Query: 192 IYEAAQDAGLPIGVHAFGFGGNPITASGWPSYYIEEMVGHSQCQQTALASLVLEGVFERF 251 IYE AQ LP+G+H G+GG+ T GWPSYY+EE ++ LASLV+EGV ERF Sbjct: 216 IYERAQALDLPLGIHVGGYGGHAPTGGGWPSYYVEEHQSNAHTIAAQLASLVIEGVPERF 275 Query: 252 PKLKMVMVEAGFGWAPSLAWRLDKVFSRLHAEVPHLKRKPSEYIRDHIWWTTQPMEDPES 311 PKLK+V +E GFGW PS WR+D+ F R +EVPHLKR+PSEY+R+H W+TTQP+++P+ Sbjct: 276 PKLKIVFIEGGFGWIPSAVWRMDQHFERFRSEVPHLKRRPSEYVREHFWFTTQPIDEPDE 335 Query: 312 RDHLFQTIEWIGWDRLLFATDYPHWDYDEPSRVLPAGVSDANRQAFYLDNARQLY 366 HL IEW+G DRLLF++DYPHWD+D+P +++A R+ + NAR +Y Sbjct: 336 ARHLRALIEWVGIDRLLFSSDYPHWDFDDPRFAFKTPLTEAERKKIFSTNARAVY 390 >ref|ZP_08628890.1| hypothetical protein CSIRO_1975 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08249.1| hypothetical protein CSIRO_1975 [Bradyrhizobiaceae bacterium SG-6C] Length = 367 Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 179/365 (49%), Positives = 238/365 (65%), Gaps = 1/365 (0%) Query: 3 IQLRERPETASPTGVKTAIADCDIHPARATKDELYPYLEKRWHAHLETFGVHAYQGMMEG 62 + + E +T++ I DCDIHP T L+PYL KRW H E FG H Q + Sbjct: 1 MSIVESTQTSADAKSAAGIIDCDIHPLPKTAKSLHPYLPKRWQEHAEEFGAHLRQPFINT 60 Query: 63 PPYPKAQPNASRRDAYPPEGGPQGSSLSFMQKQHLDPNNVALGVLNPL-NTGQGIRNQDL 121 YP++ P RRDA+PP GGP GS L+FMQ+QHLDP N+ GVL PL RN Sbjct: 61 TQYPRSAPLICRRDAWPPGGGPPGSDLAFMQQQHLDPFNIVHGVLIPLFGNVASERNLGY 120 Query: 122 AGAICSAINDWQIEKWTSKDSRLKGSVVVANEDGMSAAAEIRKRAGDKNFVQVLLLSRNV 181 A A+ +A NDWQI +W +D RL ++VV +D +A EI + A DK FVQ++L R+ Sbjct: 121 ARAMATAHNDWQIAEWCERDKRLYATLVVVQDDAAAAVKEIERCARDKRFVQIMLAPRSS 180 Query: 182 EPLGQRRYWPIYEAAQDAGLPIGVHAFGFGGNPITASGWPSYYIEEMVGHSQCQQTALAS 241 EPLG+ RYWPIYEAAQ LP+G+H++G GG+ T GWPS+Y+EE + ++S Sbjct: 181 EPLGRERYWPIYEAAQALDLPLGIHSYGVGGHASTGGGWPSFYMEEHYATTMGGPAVMSS 240 Query: 242 LVLEGVFERFPKLKMVMVEAGFGWAPSLAWRLDKVFSRLHAEVPHLKRKPSEYIRDHIWW 301 +VLEGVFERFPKL++V+VE GF W PS AWRLD+++ R+ EVPHL R PSEYIR + W+ Sbjct: 241 MVLEGVFERFPKLRVVLVEIGFAWVPSFAWRLDRLWQRMSREVPHLTRPPSEYIRRNFWY 300 Query: 302 TTQPMEDPESRDHLFQTIEWIGWDRLLFATDYPHWDYDEPSRVLPAGVSDANRQAFYLDN 361 TTQPME+P + L +T +W+GWDRLLF++DYPHWD D+P+ ++ A R+ N Sbjct: 301 TTQPMEEPPQPELLRRTFDWVGWDRLLFSSDYPHWDQDDPAYAFNMKMTPAERRQICRTN 360 Query: 362 ARQLY 366 A Q + Sbjct: 361 AEQFH 365 >ref|NP_085765.1| hypothetical protein mlr9222 [Mesorhizobium loti MAFF303099] dbj|BAB54606.1| mlr9222 [Mesorhizobium loti MAFF303099] Length = 371 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 168/366 (45%), Positives = 226/366 (61%), Gaps = 3/366 (0%) Query: 5 LRERPETASPTGVKTAIADCDIHPARATKDELYPYLEKRWHAHLETFGVHAYQGMMEGPP 64 L ++P+ A+P+ T DCDIH + +L +L + W H ET G QG+ + Sbjct: 6 LNQKPKVAAPS--HTGFIDCDIHATWNSLADLDEFLPQYWREHRETIGSRWRQGLAKTMN 63 Query: 65 YPK-AQPNASRRDAYPPEGGPQGSSLSFMQKQHLDPNNVALGVLNPLNTGQGIRNQDLAG 123 YP+ ++ R+DA+P G G+ L MQKQ LD NV G++ RN + Sbjct: 64 YPRMSKGGGVRQDAWPSNGCVPGADLPMMQKQLLDLFNVEYGIMVQPMELSSERNVEFGA 123 Query: 124 AICSAINDWQIEKWTSKDSRLKGSVVVANEDGMSAAAEIRKRAGDKNFVQVLLLSRNVEP 183 A+ +A N+WQ+ W + RLKG+V + ED +A AEI +RAGD+ FVQV R VEP Sbjct: 124 ALATAANEWQLAHWCDPEPRLKGAVQINVEDEKAAIAEIERRAGDRRFVQVQFPQRGVEP 183 Query: 184 LGQRRYWPIYEAAQDAGLPIGVHAFGFGGNPITASGWPSYYIEEMVGHSQCQQTALASLV 243 +G+RRYWPI EA G PI +H G GG+P TA GWPSYY EE + Q Q + SLV Sbjct: 184 IGRRRYWPIMEACAANGFPIAIHIGGIGGHPSTAGGWPSYYHEEHPAYVQAMQNTVISLV 243 Query: 244 LEGVFERFPKLKMVMVEAGFGWAPSLAWRLDKVFSRLHAEVPHLKRKPSEYIRDHIWWTT 303 EGV P LK++++E+GFGW PSL WRLD + RL AEVP L+ KPSEY+R+ IW TT Sbjct: 244 CEGVLSHIPNLKVILLESGFGWLPSLCWRLDTAWKRLRAEVPLLREKPSEYVRERIWLTT 303 Query: 304 QPMEDPESRDHLFQTIEWIGWDRLLFATDYPHWDYDEPSRVLPAGVSDANRQAFYLDNAR 363 QP+++PE L TIEWIG DRL+F+TDYPHWD D+P A + +A ++ + DNAR Sbjct: 304 QPVDEPERPQDLLSTIEWIGEDRLMFSTDYPHWDQDDPRYAFKAALPEAWKRKIFHDNAR 363 Query: 364 QLYGIA 369 LYG++ Sbjct: 364 TLYGLS 369