BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0032.p (436 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774545.1| citrate-proton symporter [Bradyrhizobium japoni... 707 0.0 ref|YP_001242926.1| citrate-proton symporter [Bradyrhizobium sp.... 706 0.0 ref|YP_001203069.1| citrate transporter [Bradyrhizobium sp. ORS ... 680 0.0 gb|AAK00168.1|AF222753_23 transmembrane proton symport protein [... 656 0.0 ref|YP_001417173.1| general substrate transporter [Xanthobacter ... 614 e-173 >ref|NP_774545.1| citrate-proton symporter [Bradyrhizobium japonicum USDA 110] dbj|BAC53170.1| citrate-proton symporter [Bradyrhizobium japonicum USDA 110] Length = 443 Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/422 (88%), Positives = 400/422 (94%) Query: 4 SSSSQVPQIKSRLGAILRATSGNFLEQFDFFLFGFYAQAIAKAFFPSENETAALLNAFGV 63 ++S+ P+IKSR+GAILRATSGNFLEQFDFFLFGFYA AI KAFFPS NETA+LLN FGV Sbjct: 5 ATSTNPPEIKSRIGAILRATSGNFLEQFDFFLFGFYAAAIGKAFFPSTNETASLLNTFGV 64 Query: 64 FWLGALMRPVGAVVLGAYIDRIGRRKGLIVTLSIMAIGTVVIALCPSYATIGIAAPIIVL 123 FWLGALMRPVGA+VLGAYIDRIGRR+GLIVTL IMAIGTVVIA CPSYATIGIAAP+IVL Sbjct: 65 FWLGALMRPVGAIVLGAYIDRIGRRQGLIVTLGIMAIGTVVIAFCPSYATIGIAAPVIVL 124 Query: 124 IARLLQGFSAGVELGGVSVYLAEIATPGNRGFYTSFQSASQQVAIFVASILGFVLSESMP 183 I RLLQGFSAGVELGGVSVYLAEI+TPGNRGFYTSFQS+SQQVAIFVASILG++LSE MP Sbjct: 125 IGRLLQGFSAGVELGGVSVYLAEISTPGNRGFYTSFQSSSQQVAIFVASILGYLLSEVMP 184 Query: 184 AATVASWGWRIPFFVGCLIIPVIFFLRRTLEETPAFLAMKKHPTASEVFASAIANWRIVV 243 A TVA+WGWRIPFFVGCLIIP+IFFLRRTLEETPAFLAMKKHPTASEVFASA+ANWRIV+ Sbjct: 185 ADTVAAWGWRIPFFVGCLIIPLIFFLRRTLEETPAFLAMKKHPTASEVFASALANWRIVI 244 Query: 244 LGMMIAVLTTTTFYFVTVYTPTFGKTVLKLSTQDALLVTLLVAVTNFIWNPVGGAVSDRI 303 LGMMIA+LTTTTFYFVTVYTPTFGKTVLKLSTQDALLVTLLVAVTNF WNPVGGA+SDRI Sbjct: 245 LGMMIAILTTTTFYFVTVYTPTFGKTVLKLSTQDALLVTLLVAVTNFFWNPVGGALSDRI 304 Query: 304 GRKPVLLAIAGLSLITAYPALHWLVTNPSFGKMLAVEMMFSFYFGVYSGTMLGCLVEIVP 363 GRKPVL+ IA LSL+TAYPALHWLV P+FGK+LAVEMMFSFYFGVYSGTMLG LVEIVP Sbjct: 305 GRKPVLITIACLSLVTAYPALHWLVAAPTFGKLLAVEMMFSFYFGVYSGTMLGALVEIVP 364 Query: 364 AHVRTTCFSLAFALAAGLFGTFTPFASTWLIQQTGDKASPGYWLMCAAALGIVAALIVYR 423 AHVRTTCFSLAFALAA LFGTFTPFASTWLI++TGDKASPG+WLM AA LGI+AA VYR Sbjct: 365 AHVRTTCFSLAFALAAALFGTFTPFASTWLIERTGDKASPGFWLMFAALLGIIAASTVYR 424 Query: 424 GG 425 GG Sbjct: 425 GG 426 >ref|YP_001242926.1| citrate-proton symporter [Bradyrhizobium sp. BTAi1] gb|ABQ39020.1| citrate-proton symporter [Bradyrhizobium sp. BTAi1] Length = 437 Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/437 (85%), Positives = 405/437 (92%), Gaps = 1/437 (0%) Query: 1 MSQSSSSQVPQIKSRLGAILRATSGNFLEQFDFFLFGFYAQAIAKAFFPSENETAALLNA 60 MSQ S+SQ P I SR+GAILRATSGNFLEQFDFFLFGFYA AI KAFFPS +ETA+LLN Sbjct: 1 MSQPSASQAPTINSRIGAILRATSGNFLEQFDFFLFGFYAAAIGKAFFPSTDETASLLNT 60 Query: 61 FGVFWLGALMRPVGAVVLGAYIDRIGRRKGLIVTLSIMAIGTVVIALCPSYATIGIAAPI 120 FGVFWLGALMRPVGA+VLGAYID+IGRR+GLIVTL IMA GTVVIA CPSY TIGIAAP+ Sbjct: 61 FGVFWLGALMRPVGAIVLGAYIDKIGRRQGLIVTLGIMAAGTVVIAFCPSYETIGIAAPV 120 Query: 121 IVLIARLLQGFSAGVELGGVSVYLAEIATPGNRGFYTSFQSASQQVAIFVASILGFVLSE 180 IVL+ RLLQGFSAGVELGGVSVYL+EIATPGNRGFYTSFQS+SQQVAIFVASILG++LSE Sbjct: 121 IVLLGRLLQGFSAGVELGGVSVYLSEIATPGNRGFYTSFQSSSQQVAIFVASILGYLLSE 180 Query: 181 SMPAATVASWGWRIPFFVGCLIIPVIFFLRRTLEETPAFLAMKKHPTASEVFASAIANWR 240 +MPAATV +WGWRIPFFVGCLIIP+IFFLRRTLEETPAFLAMKKHPTA EVFASA+ANWR Sbjct: 181 AMPAATVTAWGWRIPFFVGCLIIPLIFFLRRTLEETPAFLAMKKHPTAREVFASALANWR 240 Query: 241 IVVLGMMIAVLTTTTFYFVTVYTPTFGKTVLKLSTQDALLVTLLVAVTNFIWNPVGGAVS 300 IV+LGMMIA+LTTTTFYFVTVYTPTFGKTVLKLS+ DALLVTLLVAVTNFIWNPVGGA+S Sbjct: 241 IVLLGMMIAILTTTTFYFVTVYTPTFGKTVLKLSSADALLVTLLVAVTNFIWNPVGGALS 300 Query: 301 DRIGRKPVLLAIAGLSLITAYPALHWLVTNPSFGKMLAVEMMFSFYFGVYSGTMLGCLVE 360 DRIGRKPVL+ IA L+L+TAYPAL WLV+ PSFGKMLAVEMMFSFYFG+YSGTMLG LVE Sbjct: 301 DRIGRKPVLITIATLALLTAYPALSWLVSAPSFGKMLAVEMMFSFYFGMYSGTMLGALVE 360 Query: 361 IVPAHVRTTCFSLAFALAAGLFGTFTPFASTWLIQQTGDKASPGYWLMCAAALGIVAALI 420 IVPAHVRTTCFSLAFALAA LFGTFTPFA+TWLI++TGDKASPG+WLM AA LGI+AAL Sbjct: 361 IVPAHVRTTCFSLAFALAAALFGTFTPFAATWLIEKTGDKASPGFWLMFAAVLGIIAALT 420 Query: 421 VYRGG-QTIEQRETVAA 436 VYRGG Q + RE A Sbjct: 421 VYRGGKQAVATREPATA 437 >ref|YP_001203069.1| citrate transporter [Bradyrhizobium sp. ORS 278] emb|CAL74832.1| citrate-proton symporter (Citrate transporter) (Citrate carrier protein) [Bradyrhizobium sp. ORS 278] Length = 437 Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/426 (86%), Positives = 399/426 (93%) Query: 1 MSQSSSSQVPQIKSRLGAILRATSGNFLEQFDFFLFGFYAQAIAKAFFPSENETAALLNA 60 MS + Q IKSR+GAILRATSGNFLEQFDFFLFGFYA AI KAFFPS +ETA+LLN Sbjct: 1 MSSTPIQQPATIKSRIGAILRATSGNFLEQFDFFLFGFYAAAIGKAFFPSTDETASLLNT 60 Query: 61 FGVFWLGALMRPVGAVVLGAYIDRIGRRKGLIVTLSIMAIGTVVIALCPSYATIGIAAPI 120 FGVFWLGALMRPVGA+VLGAYID+IGRR+GLIVTL IMA GTVVIA CP+Y TIG+AAPI Sbjct: 61 FGVFWLGALMRPVGAIVLGAYIDKIGRRQGLIVTLGIMAAGTVVIAFCPTYETIGVAAPI 120 Query: 121 IVLIARLLQGFSAGVELGGVSVYLAEIATPGNRGFYTSFQSASQQVAIFVASILGFVLSE 180 IVL+ RLLQGFSAGVELGGVSVYL+EIATPGNRGFYTSFQS+SQQVAIFVASILG++LSE Sbjct: 121 IVLLGRLLQGFSAGVELGGVSVYLSEIATPGNRGFYTSFQSSSQQVAIFVASILGYLLSE 180 Query: 181 SMPAATVASWGWRIPFFVGCLIIPVIFFLRRTLEETPAFLAMKKHPTASEVFASAIANWR 240 SMPAATV +WGWRIPFFVGCLIIP+IFFLRRTLEETPAFLAMKKHPT SEVFASA+ANWR Sbjct: 181 SMPAATVTAWGWRIPFFVGCLIIPLIFFLRRTLEETPAFLAMKKHPTTSEVFASALANWR 240 Query: 241 IVVLGMMIAVLTTTTFYFVTVYTPTFGKTVLKLSTQDALLVTLLVAVTNFIWNPVGGAVS 300 IV+LGMMIA+LTTTTFYFVTVYTPTFGKTVLKLST DALLVTLLVAVTNFIWNPVGGA+S Sbjct: 241 IVLLGMMIAILTTTTFYFVTVYTPTFGKTVLKLSTADALLVTLLVAVTNFIWNPVGGALS 300 Query: 301 DRIGRKPVLLAIAGLSLITAYPALHWLVTNPSFGKMLAVEMMFSFYFGVYSGTMLGCLVE 360 DRIGRKPVL+ IA LSL+TAYPAL WLV+ P+FGKMLAVEMMFSFYFG+YSGTMLG LVE Sbjct: 301 DRIGRKPVLIGIAVLSLLTAYPALSWLVSAPTFGKMLAVEMMFSFYFGMYSGTMLGALVE 360 Query: 361 IVPAHVRTTCFSLAFALAAGLFGTFTPFASTWLIQQTGDKASPGYWLMCAAALGIVAALI 420 IVPAHVRTTCFSLAFALAA LFGTFTPFA+TWLI++TGDKASPG+WLM AAALGI+AAL Sbjct: 361 IVPAHVRTTCFSLAFALAAALFGTFTPFAATWLIEKTGDKASPGFWLMFAAALGIIAALT 420 Query: 421 VYRGGQ 426 VYRGGQ Sbjct: 421 VYRGGQ 426 >gb|AAK00168.1|AF222753_23 transmembrane proton symport protein [Bradyrhizobium sp. WM9] Length = 449 Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/425 (80%), Positives = 382/425 (89%) Query: 1 MSQSSSSQVPQIKSRLGAILRATSGNFLEQFDFFLFGFYAQAIAKAFFPSENETAALLNA 60 MS +S KSR+GAILRATSGNFLEQFDFFLFGFYA AI AFFPS +ETA+LLN Sbjct: 1 MSPASIGHGSNAKSRIGAILRATSGNFLEQFDFFLFGFYASAIGNAFFPSGSETASLLNT 60 Query: 61 FGVFWLGALMRPVGAVVLGAYIDRIGRRKGLIVTLSIMAIGTVVIALCPSYATIGIAAPI 120 FGVFWLGALMRPVGA+VLGAYID+IGRR+GLI+TLSIMAIGT++IA CP YATIGIAAP+ Sbjct: 61 FGVFWLGALMRPVGAIVLGAYIDQIGRRQGLIITLSIMAIGTIIIAFCPGYATIGIAAPV 120 Query: 121 IVLIARLLQGFSAGVELGGVSVYLAEIATPGNRGFYTSFQSASQQVAIFVASILGFVLSE 180 IVL RLLQGFSAGVE+GGVSVYL+EIATPGNRGFYTSFQS+SQQVAIFVA+++G+ LSE Sbjct: 121 IVLFGRLLQGFSAGVEVGGVSVYLSEIATPGNRGFYTSFQSSSQQVAIFVAALIGYFLSE 180 Query: 181 SMPAATVASWGWRIPFFVGCLIIPVIFFLRRTLEETPAFLAMKKHPTASEVFASAIANWR 240 ++PA VA+WGWRIPFF+GCLI+P+IFFLRRTLEETP FL MK HPTA EVFAS +ANWR Sbjct: 181 ALPAEMVAAWGWRIPFFLGCLIVPLIFFLRRTLEETPEFLVMKNHPTAREVFASTVANWR 240 Query: 241 IVVLGMMIAVLTTTTFYFVTVYTPTFGKTVLKLSTQDALLVTLLVAVTNFIWNPVGGAVS 300 IV+LGMMIA+LTTTTFYFVTVYTPTFGK VL+LS+Q+ LLVTLLVAVTNFIWNP+GGA+S Sbjct: 241 IVILGMMIAMLTTTTFYFVTVYTPTFGKHVLQLSSQNTLLVTLLVAVTNFIWNPIGGAIS 300 Query: 301 DRIGRKPVLLAIAGLSLITAYPALHWLVTNPSFGKMLAVEMMFSFYFGVYSGTMLGCLVE 360 D+IGRKPVLL IAGL+L+T YPAL WLVT+PSFGKMLAVEMMFSFYFG YSG MLG LVE Sbjct: 301 DKIGRKPVLLTIAGLALVTVYPALSWLVTDPSFGKMLAVEMMFSFYFGTYSGAMLGALVE 360 Query: 361 IVPAHVRTTCFSLAFALAAGLFGTFTPFASTWLIQQTGDKASPGYWLMCAAALGIVAALI 420 IVP HVRTTCFSLAFALAA LFGTFTP ASTWLI++T DKASPG+WLM AA LGI+A L Sbjct: 361 IVPKHVRTTCFSLAFALAAALFGTFTPLASTWLIERTNDKASPGFWLMFAALLGIIAVLT 420 Query: 421 VYRGG 425 +Y G Sbjct: 421 IYPGN 425 >ref|YP_001417173.1| general substrate transporter [Xanthobacter autotrophicus Py2] gb|ABS67516.1| General substrate transporter [Xanthobacter autotrophicus Py2] Length = 440 Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust. Identities = 305/419 (72%), Positives = 356/419 (84%) Query: 6 SSQVPQIKSRLGAILRATSGNFLEQFDFFLFGFYAQAIAKAFFPSENETAALLNAFGVFW 65 +++VP I+SR AILR+TSGNFLEQFDFFLFGFYA +I+KAFFP+ NE LL F FW Sbjct: 14 TAEVPAIRSRTAAILRSTSGNFLEQFDFFLFGFYATSISKAFFPTGNEVTELLLTFTTFW 73 Query: 66 LGALMRPVGAVVLGAYIDRIGRRKGLIVTLSIMAIGTVVIALCPSYATIGIAAPIIVLIA 125 LGALMRPVGA+VLG+Y+D IGRRKGLIVTL IMA GTV+IA+CP+YA IGIAAP+IVL Sbjct: 74 LGALMRPVGAIVLGSYLDHIGRRKGLIVTLGIMAAGTVLIAVCPTYAQIGIAAPLIVLFG 133 Query: 126 RLLQGFSAGVELGGVSVYLAEIATPGNRGFYTSFQSASQQVAIFVASILGFVLSESMPAA 185 RLLQGFSAGVELGGVS+YL EIATPGN+GFYTSFQSASQQVAIF A+I+GF LS+ MP+ Sbjct: 134 RLLQGFSAGVELGGVSIYLFEIATPGNKGFYTSFQSASQQVAIFFAAIIGFSLSQLMPSE 193 Query: 186 TVASWGWRIPFFVGCLIIPVIFFLRRTLEETPAFLAMKKHPTASEVFASAIANWRIVVLG 245 T+++WGWRIPFF+GC IIP IFF+RRTLEETP FL KKHPT SEVFA+ + NWRIV+LG Sbjct: 194 TISAWGWRIPFFIGCAIIPFIFFIRRTLEETPEFLKQKKHPTQSEVFAAMLTNWRIVLLG 253 Query: 246 MMIAVLTTTTFYFVTVYTPTFGKTVLKLSTQDALLVTLLVAVTNFIWNPVGGAVSDRIGR 305 MM+ +TT TFYF+TVYTPTFGK VLKLS D+LLVTLLVA TNFIW P+GGA+SDR+GR Sbjct: 254 MMLTAMTTVTFYFITVYTPTFGKNVLKLSITDSLLVTLLVATTNFIWLPIGGAISDRVGR 313 Query: 306 KPVLLAIAGLSLITAYPALHWLVTNPSFGKMLAVEMMFSFYFGVYSGTMLGCLVEIVPAH 365 +PVLL IA L+L TAYPAL WLV P+F KML VE+ FS FGVY+G M+ L E VPAH Sbjct: 314 RPVLLTIAILALATAYPALAWLVVEPTFNKMLMVELWFSLCFGVYNGAMVAALSEEVPAH 373 Query: 366 VRTTCFSLAFALAAGLFGTFTPFASTWLIQQTGDKASPGYWLMCAAALGIVAALIVYRG 424 VRTTCFSLAFALAA LFGTFTP STWLI TG++A+PG+WLM AAA G++A +++YRG Sbjct: 374 VRTTCFSLAFALAAALFGTFTPLVSTWLIDMTGNRAAPGFWLMAAAASGLIATILIYRG 432