BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0029.p         (67 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774543.1| hypothetical protein bsl7903 [Bradyrhizobium ja...   103   1e-20
ref|YP_782739.1| hypothetical protein RPE_3832 [Rhodopseudomonas...    85   5e-15
ref|YP_001242924.1| hypothetical protein BBta_7136 [Bradyrhizobi...    79   2e-13
ref|YP_001203071.1| hypothetical protein BRADO0916 [Bradyrhizobi...    77   1e-12
ref|YP_533590.1| hypothetical protein RPC_3736 [Rhodopseudomonas...    69   2e-10

>ref|NP_774543.1| hypothetical protein bsl7903 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53168.1| bsl7903 [Bradyrhizobium japonicum USDA 110]
          Length = 67

 Score =  103 bits (256), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 46/67 (68%), Positives = 54/67 (80%)

Query: 1  MSISTHESMTNHHTPGLLNQVGETLHVWWERYERRRELSQWTERDLHDIGMSRSDIVFET 60
          MS  T  SMTNHH PGL+ Q+GETLHVW ERY  RREL++WT RDLHD+G+S SDI +E 
Sbjct: 1  MSTLTQNSMTNHHAPGLIQQIGETLHVWHERYRTRRELTKWTARDLHDVGLSWSDIAYEA 60

Query: 61 EKPFWRA 67
          +KPFWRA
Sbjct: 61 DKPFWRA 67


>ref|YP_782739.1| hypothetical protein RPE_3832 [Rhodopseudomonas palustris BisA53]
 gb|ABJ07759.1| protein of unknown function DUF1127 [Rhodopseudomonas palustris
          BisA53]
          Length = 67

 Score = 84.7 bits (208), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 38/67 (56%), Positives = 49/67 (73%)

Query: 1  MSISTHESMTNHHTPGLLNQVGETLHVWWERYERRRELSQWTERDLHDIGMSRSDIVFET 60
          MSI + +SMTNHH  G L   G  LH W ER   RREL++++ERDLHD+G+S SD+ +E 
Sbjct: 1  MSICSDQSMTNHHELGFLVLAGAVLHTWRERQRTRRELARFSERDLHDVGLSWSDVAYEI 60

Query: 61 EKPFWRA 67
          +KPFWRA
Sbjct: 61 DKPFWRA 67


>ref|YP_001242924.1| hypothetical protein BBta_7136 [Bradyrhizobium sp. BTAi1]
 gb|ABQ39018.1| hypothetical protein BBta_7136 [Bradyrhizobium sp. BTAi1]
          Length = 67

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 45/67 (67%)

Query: 1  MSISTHESMTNHHTPGLLNQVGETLHVWWERYERRRELSQWTERDLHDIGMSRSDIVFET 60
          MSI     MT +HT GL + V E L  W  RY  R ELS W+ERDLHD+G+SRSDI  E 
Sbjct: 1  MSIYVSSLMTKNHTRGLWSGVAELLAAWRFRYRTRHELSLWSERDLHDLGLSRSDIAAEI 60

Query: 61 EKPFWRA 67
          +KPFWRA
Sbjct: 61 DKPFWRA 67


>ref|YP_001203071.1| hypothetical protein BRADO0916 [Bradyrhizobium sp. ORS 278]
 emb|CAL74834.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 59

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/59 (59%), Positives = 42/59 (71%)

Query: 9  MTNHHTPGLLNQVGETLHVWWERYERRRELSQWTERDLHDIGMSRSDIVFETEKPFWRA 67
          MT HH PG  + V E L  W  R+  R EL+QW+ERDLHD+G+SRSDI  E +KPFWRA
Sbjct: 1  MTKHHGPGFWSGVAELLAAWRFRHRTRHELAQWSERDLHDLGLSRSDIAAEIDKPFWRA 59


>ref|YP_533590.1| hypothetical protein RPC_3736 [Rhodopseudomonas palustris BisB18]
 gb|ABD89271.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisB18]
          Length = 67

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/66 (50%), Positives = 43/66 (65%)

Query: 1  MSISTHESMTNHHTPGLLNQVGETLHVWWERYERRRELSQWTERDLHDIGMSRSDIVFET 60
          MSI    SMTNHH   +  Q+G  L  W  R  +RREL++ TER+LHD+G+S S+  +E 
Sbjct: 1  MSICPDRSMTNHHETSVFAQLGAVLLTWHARQRQRRELARLTERELHDVGLSWSEASYEI 60

Query: 61 EKPFWR 66
           KPFWR
Sbjct: 61 GKPFWR 66