BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0026.p (233 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774540.1| nodulation protein [Bradyrhizobium japonicum US... 416 e-114 ref|YP_001203073.1| putative 3-oxoacyl-[acyl-carrier-protein] re... 405 e-111 ref|YP_001242922.1| putative 3-oxoacyl-(acyl-carrier-protein) re... 402 e-110 ref|YP_325250.1| short-chain dehydrogenase/reductase SDR [Anabae... 304 5e-81 ref|YP_002965156.1| short-chain dehydrogenase/reductase SDR [met... 304 7e-81 >ref|NP_774540.1| nodulation protein [Bradyrhizobium japonicum USDA 110] dbj|BAC53165.1| blr7900 [Bradyrhizobium japonicum USDA 110] Length = 233 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 202/233 (86%), Positives = 218/233 (93%) Query: 1 MDIPKYKIALIVGAGAGLSASLTRLFSREGIRVALGARSIEKLGALCTETGARAYACDTT 60 M+ PKYKIALIVGAG GLSASL RL S +GIRVAL AR IEKLGALCTETGA+AYAC+ T Sbjct: 1 MEHPKYKIALIVGAGEGLSASLARLLSTQGIRVALAARKIEKLGALCTETGAKAYACNAT 60 Query: 61 KAEDVERLFGLVEREIGTPDLVVYNASGRSRGPFVELVLSEVEQAIAVSAFGGFLVAQEA 120 + ++VERLFGLVEREIGTPDLVVYNASGR+RGPFV+LV ++V QAIAVSA+GGFLVAQ+A Sbjct: 61 EPDEVERLFGLVEREIGTPDLVVYNASGRTRGPFVDLVPADVAQAIAVSAYGGFLVAQQA 120 Query: 121 AKRMLPNKKGAILFTGASASVKGYAQSAPFAMGKFALRGLAQSMARELSPQGIHVAHFVI 180 AKRMLPNK GAILFTGASASVKGYAQSA FAMGKFALRGLAQS+ARELSPQGIHVAHFVI Sbjct: 121 AKRMLPNKHGAILFTGASASVKGYAQSASFAMGKFALRGLAQSLARELSPQGIHVAHFVI 180 Query: 181 DGGIRSAARTEPADRPDSMLDPDAIALSYWNVLQQPRSAWTWELELRPWVEKF 233 DGGIRSAARTEP D+PDSMLDPDAIA SYWNVLQQPRSAW+WELELRPWVEKF Sbjct: 181 DGGIRSAARTEPEDKPDSMLDPDAIAQSYWNVLQQPRSAWSWELELRPWVEKF 233 >ref|YP_001203073.1| putative 3-oxoacyl-[acyl-carrier-protein] reductase [Bradyrhizobium sp. ORS 278] emb|CAL74836.1| putative 3-oxoacyl-[acyl-carrier-protein] reductase [Bradyrhizobium sp. ORS 278] Length = 233 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 196/233 (84%), Positives = 211/233 (90%) Query: 1 MDIPKYKIALIVGAGAGLSASLTRLFSREGIRVALGARSIEKLGALCTETGARAYACDTT 60 MDIP YKIALIVGAG GLSASL RLF+RE IRVAL AR EKLGA+C+ETGARAY CD T Sbjct: 1 MDIPAYKIALIVGAGEGLSASLARLFAREKIRVALAARKTEKLGAICSETGARAYPCDAT 60 Query: 61 KAEDVERLFGLVEREIGTPDLVVYNASGRSRGPFVELVLSEVEQAIAVSAFGGFLVAQEA 120 E+VERLFGLV REIG PDLVVYNAS R+RGP +LV ++V+ AIAVSAFGGFLVAQ+A Sbjct: 61 NPEEVERLFGLVSREIGEPDLVVYNASARARGPLTDLVPADVQNAIAVSAFGGFLVAQQA 120 Query: 121 AKRMLPNKKGAILFTGASASVKGYAQSAPFAMGKFALRGLAQSMARELSPQGIHVAHFVI 180 A+RMLPNK GAILFTGASASVKGYAQSAPFAMGKFALRGLAQSMARELSPQGIHVAHFVI Sbjct: 121 AQRMLPNKHGAILFTGASASVKGYAQSAPFAMGKFALRGLAQSMARELSPQGIHVAHFVI 180 Query: 181 DGGIRSAARTEPADRPDSMLDPDAIALSYWNVLQQPRSAWTWELELRPWVEKF 233 DGGIRSAAR EPA+RPDSMLDPDAIA SYW+VLQQPRSAW+WE+ELRPWVE F Sbjct: 181 DGGIRSAARQEPAERPDSMLDPDAIAASYWSVLQQPRSAWSWEMELRPWVETF 233 >ref|YP_001242922.1| putative 3-oxoacyl-(acyl-carrier-protein) reductase [Bradyrhizobium sp. BTAi1] gb|ABQ39016.1| putative 3-oxoacyl-(acyl-carrier-protein) reductase [Bradyrhizobium sp. BTAi1] Length = 233 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 196/233 (84%), Positives = 211/233 (90%) Query: 1 MDIPKYKIALIVGAGAGLSASLTRLFSREGIRVALGARSIEKLGALCTETGARAYACDTT 60 MDIP YKIALIVGAG GLSASL RLF+RE IRVAL AR IEKLGALC+ETGARAY CD T Sbjct: 1 MDIPAYKIALIVGAGEGLSASLARLFAREKIRVALAARKIEKLGALCSETGARAYPCDAT 60 Query: 61 KAEDVERLFGLVEREIGTPDLVVYNASGRSRGPFVELVLSEVEQAIAVSAFGGFLVAQEA 120 ++VERLFGLVEREIG PDLVVYNAS R+RG V+LV ++V+ AIAVSAFGGFLVAQ+A Sbjct: 61 NPDEVERLFGLVEREIGPPDLVVYNASARARGALVDLVPADVQNAIAVSAFGGFLVAQQA 120 Query: 121 AKRMLPNKKGAILFTGASASVKGYAQSAPFAMGKFALRGLAQSMARELSPQGIHVAHFVI 180 A+RMLPNK GAILFTGASASVKGYAQSAPFAMGKFALRGLAQSMARELSPQGIHVAHFVI Sbjct: 121 AQRMLPNKHGAILFTGASASVKGYAQSAPFAMGKFALRGLAQSMARELSPQGIHVAHFVI 180 Query: 181 DGGIRSAARTEPADRPDSMLDPDAIALSYWNVLQQPRSAWTWELELRPWVEKF 233 DGGI+SA R EPA+RPDSMLDPDAIA SYW+VLQQ RSAWTWE+ELRPWVE F Sbjct: 181 DGGIKSAERQEPAERPDSMLDPDAIAASYWSVLQQSRSAWTWEMELRPWVETF 233 >ref|YP_325250.1| short-chain dehydrogenase/reductase SDR [Anabaena variabilis ATCC 29413] gb|ABA24355.1| Short-chain dehydrogenase/reductase SDR [Anabaena variabilis ATCC 29413] Length = 229 Score = 304 bits (779), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 147/225 (65%), Positives = 182/225 (80%) Query: 9 ALIVGAGAGLSASLTRLFSREGIRVALGARSIEKLGALCTETGARAYACDTTKAEDVERL 68 ALIVGAG+GLSAS+ RLF++EG +VAL AR I+KL L +E A ++ D K ++V++L Sbjct: 5 ALIVGAGSGLSASIARLFAKEGFKVALAARQIDKLEQLSSEIDAVSFVADAVKPDEVKQL 64 Query: 69 FGLVEREIGTPDLVVYNASGRSRGPFVELVLSEVEQAIAVSAFGGFLVAQEAAKRMLPNK 128 F V+ ++G+P +VVYN S R RG ++L ++V + + VSA+GGFLVAQEAAKRML Sbjct: 65 FIDVDHKLGSPGVVVYNPSWRVRGSLIDLDPADVAKTLEVSAYGGFLVAQEAAKRMLQQG 124 Query: 129 KGAILFTGASASVKGYAQSAPFAMGKFALRGLAQSMARELSPQGIHVAHFVIDGGIRSAA 188 GAI FTGASASVKGY QSAPFAMGKFALRGLAQS+AREL+P+ IHVAHFVIDG IRS+ Sbjct: 125 SGAIFFTGASASVKGYPQSAPFAMGKFALRGLAQSIARELAPKNIHVAHFVIDGAIRSSQ 184 Query: 189 RTEPADRPDSMLDPDAIALSYWNVLQQPRSAWTWELELRPWVEKF 233 R +PAD PDS LDPDAIA +Y N+L+QPRSAWTWE+ELRPWVE+F Sbjct: 185 RQDPADNPDSTLDPDAIAQTYLNILRQPRSAWTWEVELRPWVERF 229 >ref|YP_002965156.1| short-chain dehydrogenase/reductase SDR [methylobacterium extorquens AM1] gb|ACS41879.1| putative short-chain dehydrogenase/reductase SDR [Methylobacterium extorquens AM1] Length = 233 Score = 304 bits (778), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 156/232 (67%), Positives = 182/232 (78%), Gaps = 1/232 (0%) Query: 3 IPKYKIALIVGAGAGLSASLTRLFSREGIRVALGARSIEKLGALCTETGARAYACDTTKA 62 +P Y+ ALIVGAG GLSASL RLF+ EG++V L AR+ EKL L ETGA +ACD T Sbjct: 2 VPTYQRALIVGAGPGLSASLARLFTAEGLKVGLAARNTEKLNDLAAETGAVIHACDATDP 61 Query: 63 EDVERLFGLVEREIG-TPDLVVYNASGRSRGPFVELVLSEVEQAIAVSAFGGFLVAQEAA 121 VE LF +E +G PD+VVYNASGR RG V+L V +A++VSA+GGFLVAQ AA Sbjct: 62 SAVEALFPRLEPALGGAPDVVVYNASGRLRGATVDLDPEAVARALSVSAYGGFLVAQAAA 121 Query: 122 KRMLPNKKGAILFTGASASVKGYAQSAPFAMGKFALRGLAQSMARELSPQGIHVAHFVID 181 +RMLP++ GAILFTGASASVKG+A SAPFAMGKFALRGLAQS+AREL PQGIHVAH VID Sbjct: 122 RRMLPHRHGAILFTGASASVKGFAGSAPFAMGKFALRGLAQSLARELQPQGIHVAHVVID 181 Query: 182 GGIRSAARTEPADRPDSMLDPDAIALSYWNVLQQPRSAWTWELELRPWVEKF 233 G IRSAAR +P D PD+ LDPDAIA SY +L+Q RSAWT E+ LRPWVE+F Sbjct: 182 GAIRSAARPDPQDHPDATLDPDAIAKSYLALLRQDRSAWTDEITLRPWVERF 233