BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0024.p (362 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774538.1| alcohol dehydrogenase [Bradyrhizobium japonicum... 693 0.0 ref|YP_001242919.1| alcohol dehydrogenase [Bradyrhizobium sp. BT... 684 0.0 ref|YP_001203076.1| alcohol dehydrogenase [Bradyrhizobium sp. OR... 682 0.0 ref|YP_841982.1| putative alcohol dehydrogenase class III [Ralst... 473 e-131 ref|YP_001414273.1| alcohol dehydrogenase [Parvibaculum lavament... 468 e-130 >ref|NP_774538.1| alcohol dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC53163.1| alcohol dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 362 Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/362 (91%), Positives = 352/362 (97%) Query: 1 MKAAVLHEVNQPLVIEDVSVPNPGPREVLIRTAVAGLCHSDLHFMEGLYPHPLPAVLGHE 60 MKAAVL+EVN+PLVIEDVS+P PGPREVLIRT+VAGLCHSDLHFMEGLYPHPLPAVLGHE Sbjct: 1 MKAAVLYEVNKPLVIEDVSLPKPGPREVLIRTSVAGLCHSDLHFMEGLYPHPLPAVLGHE 60 Query: 61 SAGVVEKVGSDVNYVKPGDHVVTCLSVFCGTCDNCTTGRTVLCTDTTVKMLPGASNGLSW 120 SAGVVE+VGSDV YVKPGDHVVTCLSVFCGTCDNCTTGRTVLCTDTTVK+LPG S+ + W Sbjct: 61 SAGVVEQVGSDVTYVKPGDHVVTCLSVFCGTCDNCTTGRTVLCTDTTVKLLPGVSDRMQW 120 Query: 121 GRKEKLNQFLNLSSFAEQMLVHENAIVKIKKEMPLDLAALIGCGVITGYGAVVNTAKVTA 180 R EKL+QFLNLSSFAEQMLVHENAIVKI+KEMPLDLAALIGCGVITGYGAVVNTAKVTA Sbjct: 121 SRSEKLHQFLNLSSFAEQMLVHENAIVKIRKEMPLDLAALIGCGVITGYGAVVNTAKVTA 180 Query: 181 GETVAVIGCGGVGMAAINGAQIAGAGRIIAIDTNPAKLQLATKLGATDIVDPARGDVVQQ 240 GETVAVIGCGGVGMAAINGAQIAGAGRIIAIDTNPAKLQLATKLGATDI++PA GDVV+Q Sbjct: 181 GETVAVIGCGGVGMAAINGAQIAGAGRIIAIDTNPAKLQLATKLGATDIINPADGDVVKQ 240 Query: 241 VRELTGGGVQHSFEVLGRKDTAEQAFAMLAAGGTATIVGMIPFGQKIELHGFDFLRERRI 300 VR+LT GGV HSFEVLGRK+TAEQAFAMLA+GGTATIVGMIPFGQKIELHGFDFLRER+I Sbjct: 241 VRDLTNGGVHHSFEVLGRKETAEQAFAMLASGGTATIVGMIPFGQKIELHGFDFLRERKI 300 Query: 301 QGSSMGSNHFRVDMPRLVDFYMRGKLHLEDWISAKLKLSEINEGFANMKAGKTLRSVIMF 360 QGSSMGSNHFRVDMPRLVDFY+RG+LHLEDWISAKLKLSEINEGFANMKAGKTLRSVI+F Sbjct: 301 QGSSMGSNHFRVDMPRLVDFYLRGRLHLEDWISAKLKLSEINEGFANMKAGKTLRSVIVF 360 Query: 361 DS 362 DS Sbjct: 361 DS 362 >ref|YP_001242919.1| alcohol dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ39013.1| Alcohol dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 362 Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/362 (91%), Positives = 349/362 (96%) Query: 1 MKAAVLHEVNQPLVIEDVSVPNPGPREVLIRTAVAGLCHSDLHFMEGLYPHPLPAVLGHE 60 MKAAVL EVN+PLVIED+SVP PGPREVLIRTAVAGLCHSDLHF+EGLYPHPLPAVLGHE Sbjct: 1 MKAAVLMEVNKPLVIEDISVPKPGPREVLIRTAVAGLCHSDLHFIEGLYPHPLPAVLGHE 60 Query: 61 SAGVVEKVGSDVNYVKPGDHVVTCLSVFCGTCDNCTTGRTVLCTDTTVKMLPGASNGLSW 120 SAG+VE+VGSDV YVKPGDHVVTCLSVFCGTCDNCTTGR VLCTDTTVKM PGASN LSW Sbjct: 61 SAGIVEQVGSDVTYVKPGDHVVTCLSVFCGTCDNCTTGRPVLCTDTTVKMPPGASNRLSW 120 Query: 121 GRKEKLNQFLNLSSFAEQMLVHENAIVKIKKEMPLDLAALIGCGVITGYGAVVNTAKVTA 180 GR EKL+QFLNLSSFAEQMLVHENAIVKI+ +MPLDLAALIGCGVITGYGAVVNTA+VTA Sbjct: 121 GRSEKLHQFLNLSSFAEQMLVHENAIVKIRPDMPLDLAALIGCGVITGYGAVVNTARVTA 180 Query: 181 GETVAVIGCGGVGMAAINGAQIAGAGRIIAIDTNPAKLQLATKLGATDIVDPARGDVVQQ 240 GETVAVIGCGGVGMAAINGA+IAGAGRIIAIDTNPAKLQLATKLGATDI++PA GDVV Q Sbjct: 181 GETVAVIGCGGVGMAAINGAEIAGAGRIIAIDTNPAKLQLATKLGATDIINPADGDVVAQ 240 Query: 241 VRELTGGGVQHSFEVLGRKDTAEQAFAMLAAGGTATIVGMIPFGQKIELHGFDFLRERRI 300 VRELT GGV H+FEVLGRK+TAEQAFAMLA GGTATIVGMIPFGQKIELHGFDFLRERRI Sbjct: 241 VRELTKGGVHHAFEVLGRKETAEQAFAMLAPGGTATIVGMIPFGQKIELHGFDFLRERRI 300 Query: 301 QGSSMGSNHFRVDMPRLVDFYMRGKLHLEDWISAKLKLSEINEGFANMKAGKTLRSVIMF 360 QGSSMGSNHFRVDMPRLV+FY+RG+LHLEDWISAKLKLSEINEGFANMKAGKTLRSVI+F Sbjct: 301 QGSSMGSNHFRVDMPRLVEFYLRGRLHLEDWISAKLKLSEINEGFANMKAGKTLRSVIVF 360 Query: 361 DS 362 D+ Sbjct: 361 DA 362 >ref|YP_001203076.1| alcohol dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL74839.1| Alcohol dehydrogenase [Bradyrhizobium sp. ORS 278] Length = 362 Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/362 (90%), Positives = 348/362 (96%) Query: 1 MKAAVLHEVNQPLVIEDVSVPNPGPREVLIRTAVAGLCHSDLHFMEGLYPHPLPAVLGHE 60 MKAAVL EVN+PLVIED+SVP PGPREVLIRTAVAGLCHSDLHF+EGLYPHPLPAVLGHE Sbjct: 1 MKAAVLMEVNKPLVIEDISVPKPGPREVLIRTAVAGLCHSDLHFIEGLYPHPLPAVLGHE 60 Query: 61 SAGVVEKVGSDVNYVKPGDHVVTCLSVFCGTCDNCTTGRTVLCTDTTVKMLPGASNGLSW 120 SAG+VE+VGSDV YVKPGDHVVTCLSVFCGTCDNCTTGR VLCTDTTVKM PGASN LSW Sbjct: 61 SAGIVEQVGSDVTYVKPGDHVVTCLSVFCGTCDNCTTGRPVLCTDTTVKMPPGASNRLSW 120 Query: 121 GRKEKLNQFLNLSSFAEQMLVHENAIVKIKKEMPLDLAALIGCGVITGYGAVVNTAKVTA 180 GR EKL+QFLNLSSFAEQMLVHENAIVKI+ +MPL+LAALIGCGVITGYGAVVNTA+VTA Sbjct: 121 GRSEKLHQFLNLSSFAEQMLVHENAIVKIRNDMPLELAALIGCGVITGYGAVVNTARVTA 180 Query: 181 GETVAVIGCGGVGMAAINGAQIAGAGRIIAIDTNPAKLQLATKLGATDIVDPARGDVVQQ 240 GETVAVIGCGGVGMAAINGA+IAGAGRIIAIDTNPAKLQLATKLGATDI++P GDVV Q Sbjct: 181 GETVAVIGCGGVGMAAINGAEIAGAGRIIAIDTNPAKLQLATKLGATDIINPLDGDVVAQ 240 Query: 241 VRELTGGGVQHSFEVLGRKDTAEQAFAMLAAGGTATIVGMIPFGQKIELHGFDFLRERRI 300 VRELT GGV H+FEVLGRK+TAEQAFAMLA GGTATIVGMIPFGQKIELHGFDFLRERRI Sbjct: 241 VRELTKGGVHHAFEVLGRKETAEQAFAMLAPGGTATIVGMIPFGQKIELHGFDFLRERRI 300 Query: 301 QGSSMGSNHFRVDMPRLVDFYMRGKLHLEDWISAKLKLSEINEGFANMKAGKTLRSVIMF 360 QGSSMGSNHFRVDMPRLV+FY+RGKLHLEDWISAKLKLSEINEGFANMKAGKTLRSVI+F Sbjct: 301 QGSSMGSNHFRVDMPRLVEFYLRGKLHLEDWISAKLKLSEINEGFANMKAGKTLRSVIVF 360 Query: 361 DS 362 D+ Sbjct: 361 DA 362 >ref|YP_841982.1| putative alcohol dehydrogenase class III [Ralstonia eutropha H16] emb|CAJ97252.1| putative alcohol dehydrogenase class III [Ralstonia eutropha H16] Length = 361 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 223/361 (61%), Positives = 280/361 (77%) Query: 1 MKAAVLHEVNQPLVIEDVSVPNPGPREVLIRTAVAGLCHSDLHFMEGLYPHPLPAVLGHE 60 MKAAVL++ PL+IEDV++ PGPREVL+RTA G+CHSDLHF++G YP+P+PA+LGHE Sbjct: 1 MKAAVLYQPKTPLIIEDVAIGKPGPREVLVRTAAVGVCHSDLHFLDGAYPYPMPAILGHE 60 Query: 61 SAGVVEKVGSDVNYVKPGDHVVTCLSVFCGTCDNCTTGRTVLCTDTTVKMLPGASNGLSW 120 +AGVVE+VG++V VKPGDHV+TCLS +CG C++C TGR LC + + G L Sbjct: 61 AAGVVEQVGAEVRTVKPGDHVITCLSAYCGHCEHCLTGRLSLCIEPDTRRREGEEPRLMA 120 Query: 121 GRKEKLNQFLNLSSFAEQMLVHENAIVKIKKEMPLDLAALIGCGVITGYGAVVNTAKVTA 180 + +NQFLNLS+FAEQML+HE+A+V I+++MPLD AALIGC V TG GAV++TAKV Sbjct: 121 RQGGPMNQFLNLSAFAEQMLIHEHALVAIRRDMPLDRAALIGCAVTTGMGAVIHTAKVQP 180 Query: 181 GETVAVIGCGGVGMAAINGAQIAGAGRIIAIDTNPAKLQLATKLGATDIVDPARGDVVQQ 240 GETVAVIGCGG+G+A +N A IAGAGRIIAID PAKL+LA + GATD++D DV+ Sbjct: 181 GETVAVIGCGGIGLATVNSAAIAGAGRIIAIDRVPAKLELARRFGATDVIDAGNADVLDA 240 Query: 241 VRELTGGGVQHSFEVLGRKDTAEQAFAMLAAGGTATIVGMIPFGQKIELHGFDFLRERRI 300 VR LTGGGV H+FE +G K T EQAFAML GGTAT++GMI G KIEL G DFL E+RI Sbjct: 241 VRTLTGGGVHHAFEAIGLKQTTEQAFAMLRRGGTATVIGMIAPGVKIELKGSDFLGEKRI 300 Query: 301 QGSSMGSNHFRVDMPRLVDFYMRGKLHLEDWISAKLKLSEINEGFANMKAGKTLRSVIMF 360 QGS MGSN F VDMPR+VDFYM G+LHL++ I+ +L L IN+ F ++ G+ RSVI+F Sbjct: 301 QGSLMGSNRFPVDMPRMVDFYMAGRLHLDELIAQRLPLERINDAFDQLRRGELARSVILF 360 Query: 361 D 361 D Sbjct: 361 D 361 >ref|YP_001414273.1| alcohol dehydrogenase [Parvibaculum lavamentivorans DS-1] gb|ABS64616.1| Alcohol dehydrogenase zinc-binding domain protein [Parvibaculum lavamentivorans DS-1] Length = 361 Score = 468 bits (1204), Expect = e-130, Method: Compositional matrix adjust. Identities = 235/372 (63%), Positives = 275/372 (73%), Gaps = 21/372 (5%) Query: 1 MKAAVLHEVNQPLVIEDVSVPNPGPREVLIRTAVAGLCHSDLHFMEGLYPHPLPAVLGHE 60 MKAAVL +V QPL IEDV + PGP EVLIRT AG+CHSDLHF+EG YP+PLPAVLGHE Sbjct: 1 MKAAVLRQVGQPLAIEDVKINKPGPHEVLIRTVAAGVCHSDLHFVEGSYPYPLPAVLGHE 60 Query: 61 SAGVVEKVGSDVNYVKPGDHVVTCLSVFCGTCDNCTTGRTVLCTDTTVK----------M 110 SAGVVE+VGS+V VKPGDHV+TCLS FCG C++C TG C K Sbjct: 61 SAGVVEQVGSEVRTVKPGDHVITCLSAFCGHCEHCLTGHLSRCVSPETKRQAEEEPRLGA 120 Query: 111 LPGASNGLSWGRKEKLNQFLNLSSFAEQMLVHENAIVKIKKEMPLDLAALIGCGVITGYG 170 +PGA +NQFLNLSSFAEQML+HE+A V I+K+MPLD AALIGC V TG G Sbjct: 121 VPGA-----------MNQFLNLSSFAEQMLIHEHACVAIRKDMPLDRAALIGCSVTTGVG 169 Query: 171 AVVNTAKVTAGETVAVIGCGGVGMAAINGAQIAGAGRIIAIDTNPAKLQLATKLGATDIV 230 AV++T+ V GETVAV+GCGGVG+A INGA IAGAGRIIAIDT +KL LA + GATD+V Sbjct: 170 AVIHTSNVRPGETVAVLGCGGVGLACINGAAIAGAGRIIAIDTQGSKLNLAKEFGATDVV 229 Query: 231 DPARGDVVQQVRELTGGGVQHSFEVLGRKDTAEQAFAMLAAGGTATIVGMIPFGQKIELH 290 + GD V+QV +LT GGV HSFE +G K T EQAF MLA GGTA ++GMIP G IELH Sbjct: 230 NAKDGDPVKQVMDLTNGGVHHSFEAIGLKATTEQAFRMLARGGTANVIGMIPVGVHIELH 289 Query: 291 GFDFLRERRIQGSSMGSNHFRVDMPRLVDFYMRGKLHLEDWISAKLKLSEINEGFANMKA 350 G DFL E+RIQGS+MGSN F VDMPR VDFYM KL L+ IS ++KL ++NE F +K Sbjct: 290 GADFLGEKRIQGSTMGSNRFPVDMPRFVDFYMSDKLKLDQMISRRIKLDQVNEAFDELKR 349 Query: 351 GKTLRSVIMFDS 362 G+ RSVIMFD+ Sbjct: 350 GELARSVIMFDA 361