BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0005.0014.p (220 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768040.1| hypothetical protein blr1400 [Bradyrhizobium ja... 394 e-108 ref|ZP_01044559.1| methionine biosynthesis MetW [Nitrobacter sp.... 379 e-103 ref|YP_576025.1| methionine biosynthesis MetW [Nitrobacter hambu... 375 e-102 ref|YP_317205.1| methionine biosynthesis MetW [Nitrobacter winog... 373 e-101 ref|ZP_08628519.1| methionine biosynthesis protein MetW [Bradyrh... 366 2e-99 >ref|NP_768040.1| hypothetical protein blr1400 [Bradyrhizobium japonicum USDA 110] dbj|BAC46665.1| blr1400 [Bradyrhizobium japonicum USDA 110] Length = 223 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 190/220 (86%), Positives = 210/220 (95%), Gaps = 2/220 (0%) Query: 1 MQQTLPLPGVAPXKKKKGYRTDHLLVADMVRPGSRVLDVGCGDGELLQLLESRGIDGRGI 60 +Q+ LPL G++ ++ +R DHLLVA+MV+PGS+VLDVGCGDG+LLQLLE+RGIDGRGI Sbjct: 6 VQEVLPLGGLSA-EQSGHFRADHLLVAEMVKPGSKVLDVGCGDGDLLQLLETRGIDGRGI 64 Query: 61 ELSREGVNGCVAKGLAVVQGDADTDLVNYPDDAFDYVILSQTLQATRQPKVVLENLLRIG 120 ELSREGVN CVAKGLAVVQGDADTDLVNYPDDAFDYVILSQTLQATRQP+VVLENLLRIG Sbjct: 65 ELSREGVNRCVAKGLAVVQGDADTDLVNYPDDAFDYVILSQTLQATRQPRVVLENLLRIG 124 Query: 121 QRAIVSFPNFGFWKMRLQLLIGGHMPRTENLPASWYDTSNIHFCTIKDFVQLCEEINVKM 180 +RAIVSFPNFGFWKMRLQLLIGGHMPRTENLPA+WYDT+NIHFCTIKDFV+LC+EINVKM Sbjct: 125 RRAIVSFPNFGFWKMRLQLLIGGHMPRTENLPATWYDTANIHFCTIKDFVELCDEINVKM 184 Query: 181 ERAVALDLYGRPVPLNLPWWVWNMFGEQGVFLLSRGGQGK 220 ER+VALDLYGRPVPLNLPWWVWNMFGEQGVFLL+R GQGK Sbjct: 185 ERSVALDLYGRPVPLNLPWWVWNMFGEQGVFLLTR-GQGK 223 >ref|ZP_01044559.1| methionine biosynthesis MetW [Nitrobacter sp. Nb-311A] gb|EAQ37340.1| methionine biosynthesis MetW [Nitrobacter sp. Nb-311A] Length = 227 Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust. Identities = 181/219 (82%), Positives = 199/219 (90%), Gaps = 1/219 (0%) Query: 2 QQTLPLPGVAPXKKKKGYRTDHLLVADMVRPGSRVLDVGCGDGELLQLLESRGIDGRGIE 61 Q +LPL GVAP + YR+DHLL+A M+ GSRVLDVGCGDG+LLQLLE+RGIDGRGIE Sbjct: 10 QPSLPLNGVAPRAADR-YRSDHLLLAGMIESGSRVLDVGCGDGDLLQLLETRGIDGRGIE 68 Query: 62 LSREGVNGCVAKGLAVVQGDADTDLVNYPDDAFDYVILSQTLQATRQPKVVLENLLRIGQ 121 LSREGVN CVAKGLAVVQGDADTDL NYPDDAFDYVILSQTLQATRQPK VLE+LLRIG+ Sbjct: 69 LSREGVNRCVAKGLAVVQGDADTDLANYPDDAFDYVILSQTLQATRQPKTVLEHLLRIGR 128 Query: 122 RAIVSFPNFGFWKMRLQLLIGGHMPRTENLPASWYDTSNIHFCTIKDFVQLCEEINVKME 181 RA+VSFPNFG WKMR+QLLIGGHMPRT+NLPA+WYDT NIHFCTIKDFVQLC+EINVKME Sbjct: 129 RAVVSFPNFGHWKMRVQLLIGGHMPRTDNLPATWYDTPNIHFCTIKDFVQLCDEINVKME 188 Query: 182 RAVALDLYGRPVPLNLPWWVWNMFGEQGVFLLSRGGQGK 220 RAVAL+LYGRP+ N PWW WNMFGEQGVFLLSRG +G+ Sbjct: 189 RAVALNLYGRPLRFNAPWWFWNMFGEQGVFLLSRGEEGR 227 >ref|YP_576025.1| methionine biosynthesis MetW [Nitrobacter hamburgensis X14] gb|ABE61565.1| Methionine biosynthesis MetW [Nitrobacter hamburgensis X14] Length = 222 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 182/219 (83%), Positives = 197/219 (89%), Gaps = 1/219 (0%) Query: 2 QQTLPLPGVAPXKKKKGYRTDHLLVADMVRPGSRVLDVGCGDGELLQLLESRGIDGRGIE 61 Q TLPL VAP YR DHLL+A+M+ P S+VLDVGCGDG+LLQLLE+RGIDGRGIE Sbjct: 5 QPTLPLNDVAPLTGG-CYRGDHLLLAEMIAPNSKVLDVGCGDGDLLQLLETRGIDGRGIE 63 Query: 62 LSREGVNGCVAKGLAVVQGDADTDLVNYPDDAFDYVILSQTLQATRQPKVVLENLLRIGQ 121 LSREGVN CVAKGLAVVQGDADTDLVNYPDDAFDYVILSQTLQATRQPK VLENLLRIG+ Sbjct: 64 LSREGVNHCVAKGLAVVQGDADTDLVNYPDDAFDYVILSQTLQATRQPKAVLENLLRIGR 123 Query: 122 RAIVSFPNFGFWKMRLQLLIGGHMPRTENLPASWYDTSNIHFCTIKDFVQLCEEINVKME 181 RAIVSFPNFG+WKMR+QLL+GGHMPRT+NLPA+WYDT NIHFCTIKDFVQLC EINVKME Sbjct: 124 RAIVSFPNFGYWKMRVQLLVGGHMPRTDNLPATWYDTPNIHFCTIKDFVQLCGEINVKME 183 Query: 182 RAVALDLYGRPVPLNLPWWVWNMFGEQGVFLLSRGGQGK 220 RAVALDLYGRP+ N PWW WNMFGEQGVFLLSRG + + Sbjct: 184 RAVALDLYGRPLRFNAPWWFWNMFGEQGVFLLSRGEKNE 222 >ref|YP_317205.1| methionine biosynthesis MetW [Nitrobacter winogradskyi Nb-255] gb|ABA03853.1| methionine biosynthesis MetW [Nitrobacter winogradskyi Nb-255] Length = 229 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 177/215 (82%), Positives = 197/215 (91%), Gaps = 1/215 (0%) Query: 2 QQTLPLPGVAPXKKKKGYRTDHLLVADMVRPGSRVLDVGCGDGELLQLLESRGIDGRGIE 61 Q +LPL VA + YR+DHLL+A+M+ PGS+VLDVGCGDG+LLQLLE+RGI GRGIE Sbjct: 5 QPSLPLDEVASRPVDR-YRSDHLLLAEMIEPGSKVLDVGCGDGDLLQLLETRGISGRGIE 63 Query: 62 LSREGVNGCVAKGLAVVQGDADTDLVNYPDDAFDYVILSQTLQATRQPKVVLENLLRIGQ 121 LSREGVN CVAKGLAVVQGDADTDLVNYPDDAFDYVILSQTLQATRQPK+VLENLLRIG+ Sbjct: 64 LSREGVNRCVAKGLAVVQGDADTDLVNYPDDAFDYVILSQTLQATRQPKMVLENLLRIGR 123 Query: 122 RAIVSFPNFGFWKMRLQLLIGGHMPRTENLPASWYDTSNIHFCTIKDFVQLCEEINVKME 181 RA+VSFPNFG+WKMR+QLL+GGHMPRT+NLPA+WYDT NIHFCTIKDFVQLC+EINVKME Sbjct: 124 RAVVSFPNFGYWKMRVQLLVGGHMPRTDNLPATWYDTPNIHFCTIKDFVQLCDEINVKME 183 Query: 182 RAVALDLYGRPVPLNLPWWVWNMFGEQGVFLLSRG 216 RAVAL+LYGRP+ N PWW WNMFGEQGVFLLSR Sbjct: 184 RAVALNLYGRPLRFNAPWWFWNMFGEQGVFLLSRA 218 >ref|ZP_08628519.1| methionine biosynthesis protein MetW [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08843.1| methionine biosynthesis protein MetW [Bradyrhizobiaceae bacterium SG-6C] Length = 220 Score = 366 bits (939), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 173/200 (86%), Positives = 187/200 (93%) Query: 16 KKGYRTDHLLVADMVRPGSRVLDVGCGDGELLQLLESRGIDGRGIELSREGVNGCVAKGL 75 + GYR DHLLVA+MV PGS+VLDVGCG+G+LL+LLE+RG+DGRGIELSREGVN CVAKGL Sbjct: 18 ENGYRADHLLVAEMVEPGSKVLDVGCGEGDLLRLLETRGVDGRGIELSREGVNRCVAKGL 77 Query: 76 AVVQGDADTDLVNYPDDAFDYVILSQTLQATRQPKVVLENLLRIGQRAIVSFPNFGFWKM 135 AVVQGDADTDLVNYPDD+FDYVILSQTLQATRQP+VVLENLLRIG+ AIVSFPNFG WKM Sbjct: 78 AVVQGDADTDLVNYPDDSFDYVILSQTLQATRQPRVVLENLLRIGRSAIVSFPNFGHWKM 137 Query: 136 RLQLLIGGHMPRTENLPASWYDTSNIHFCTIKDFVQLCEEINVKMERAVALDLYGRPVPL 195 RLQLLI G MPRTENLPA+WYDT NIHFCTIKDFVQLC+EINVKMERAVALDLYGRP+ L Sbjct: 138 RLQLLIKGQMPRTENLPATWYDTPNIHFCTIKDFVQLCDEINVKMERAVALDLYGRPLRL 197 Query: 196 NLPWWVWNMFGEQGVFLLSR 215 N PWW WNMFGEQGVFLL R Sbjct: 198 NAPWWFWNMFGEQGVFLLKR 217