BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0005.0002.p         (189 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_05057116.1| hypothetical protein VDG1235_1876 [Verrucomic...    93   2e-17
ref|YP_001616052.1| hypothetical protein sce5409 [Sorangium cell...    62   4e-08
emb|CAK18681.1| endo-1,4-beta-glucanase [Clostridium thermocellum]     37   1.1  
ref|XP_002750410.1| PREDICTED: uncharacterized protein KIAA0090-...    35   4.0  
ref|YP_001865943.1| Na-Ca exchanger/integrin-beta4 [Nostoc punct...    35   4.0  

>ref|ZP_05057116.1| hypothetical protein VDG1235_1876 [Verrucomicrobiae bacterium
           DG1235]
 gb|EDY82256.1| hypothetical protein VDG1235_1876 [Verrucomicrobiae bacterium
           DG1235]
          Length = 172

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 80/159 (50%), Gaps = 5/159 (3%)

Query: 33  MHRAGVAADDGSGWHPAVSSKGSFSVLLPIPFNDFT--TRDAQTGEV-THVVGGKSSEGI 89
           MHR      D SGW+ A S++GSFS  LPIPFNDFT    D   G++ T++VG K++EG 
Sbjct: 1   MHREQADTKDDSGWYFAESTEGSFSSSLPIPFNDFTILADDPNVGQIRTYIVGAKNTEGY 60

Query: 90  KFVAVELPPGSKPP-PDLASIPKTLAANPANKVSDVRRRTSGDAEILSLTVSDGGKTMHM 148
           KF   E+    K   P+  ++        +  +S       G    L+L   +      M
Sbjct: 61  KFTITEMELNDKMHFPNFENLISEFQDKDSELISHTEEEY-GSMPCLTLNTKNESMGAFM 119

Query: 149 RCIDAKGTRYTLTIEFPNAYRDLVAANKDRFFESFKLKT 187
           R I    + +TL IE+P +  + +   +D FF SFKLK+
Sbjct: 120 RYIHGPHSTFTLIIEYPLSKNETIDTYRDYFFSSFKLKS 158


>ref|YP_001616052.1| hypothetical protein sce5409 [Sorangium cellulosum 'So ce 56']
 emb|CAN95572.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 228

 Score = 62.0 bits (149), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 3/64 (4%)

Query: 33  MHRAGVAADDGSGWHPAVSSKGSFSVLLPIPFNDFTTRDAQTGEV---THVVGGKSSEGI 89
           MHR       G GWH A S++G+FSV LP+PFNDF TR   T +V   TH VGGK+   +
Sbjct: 89  MHRVQATEPLGDGWHLARSTEGAFSVELPLPFNDFRTRAGATDDVELRTHTVGGKTPGRL 148

Query: 90  KFVA 93
            F A
Sbjct: 149 AFSA 152


>emb|CAK18681.1| endo-1,4-beta-glucanase [Clostridium thermocellum]
          Length = 563

 Score = 37.4 bits (85), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 79  HVVGGKSSEGIKFVAVELPPGSKPPPDLASIPKTLAANPANKVSDVRRRTSGDAEILSLT 138
           + VG   ++   + A E+ PG +P P          AN +N  SDVR  TS    I+ L 
Sbjct: 143 YQVGDGQADHTYWGAPEVQPGPRPVP--------YVANASNAASDVRGLTSAALTIMYLN 194

Query: 139 VSDGGKTMHMRCIDAKGTRYTL 160
             D  +    +C+ A    YT+
Sbjct: 195 YKDIDQNYANKCLKAAKELYTM 216


>ref|XP_002750410.1| PREDICTED: uncharacterized protein KIAA0090-like isoform 2
           [Callithrix jacchus]
          Length = 971

 Score = 35.4 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 12/75 (16%)

Query: 89  IKFVAVELPPGSKPPPDLASIPKTLAANPANKVSDVRRRTSGDAEILSLTVSDGGKTMHM 148
           +KF ++E  PGSK         K + A   N ++ +  RT    EI ++TVS+GG+ M  
Sbjct: 40  LKFASLEFSPGSK---------KLVVATEKNVIAALNSRT---GEIYAITVSNGGRIMRS 87

Query: 149 RCIDAKGTRYTLTIE 163
              +  G  + +T++
Sbjct: 88  WETNIGGLNWEITLD 102


>ref|YP_001865943.1| Na-Ca exchanger/integrin-beta4 [Nostoc punctiforme PCC 73102]
 gb|ACC81000.1| Na-Ca exchanger/integrin-beta4 [Nostoc punctiforme PCC 73102]
          Length = 2999

 Score = 35.4 bits (80), Expect = 4.0,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 6/70 (8%)

Query: 74   TGEVTHVVGGKSSEGIKFVAVELPPGSKPPPDLASIPKTLAANPANKVSDVRRRTSGDAE 133
            TG+V  + GG +++G      +  PG+  P  L  +P     +PA     V   ++   +
Sbjct: 1944 TGKVKDLAGGNTADG------DFSPGTSVPIQLTKLPGVTGGSPAETAVYVADLSNLGFD 1997

Query: 134  ILSLTVSDGG 143
            + SLT+ DGG
Sbjct: 1998 LSSLTIGDGG 2007