BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0016.p (274 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773228.1| ribosomal protein L11 methyltransferase [Bradyr... 426 e-117 ref|YP_001241989.1| 50S ribosomal protein L11P methyltransferase... 416 e-114 ref|YP_001207532.1| ribosomal protein L11 methyltransferase (L11... 385 e-105 ref|YP_577985.1| ribosomal L11 methyltransferase [Nitrobacter ha... 370 e-100 ref|ZP_08630943.1| ribosomal protein L11 methyltransferase [Brad... 366 2e-99 >ref|NP_773228.1| ribosomal protein L11 methyltransferase [Bradyrhizobium japonicum USDA 110] sp|Q89FW1.1|PRMA_BRAJA RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase dbj|BAC51853.1| ribosomal protein L11 methyltransferase [Bradyrhizobium japonicum USDA 110] Length = 295 Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust. Identities = 218/273 (79%), Positives = 231/273 (84%) Query: 1 VVDALSELFFEDQTAFAAFERPDGRWDVTVHFAEPPDQNLLRELVGQVVRQDVASTLVFD 60 VVD L+E+FFE A AAFERPDG+WDVT+HFA+ PDQ LRELV ++A TL FD Sbjct: 22 VVDVLTEVFFEGDAAVAAFERPDGQWDVTLHFADAPDQAWLRELVVNSAGNEIADTLAFD 81 Query: 61 TVEAKDWVKASLEDLVPVAAGRFIVHGQHDRHRIPPNKLGIEIEAALAFGTGHHGTTRGC 120 TVEAKDWVKASLEDLVPV AGRF+VHG HDR R+ PNKL IEIEAALAFGTGHHGTTRGC Sbjct: 82 TVEAKDWVKASLEDLVPVPAGRFVVHGSHDRDRVAPNKLKIEIEAALAFGTGHHGTTRGC 141 Query: 121 LLLLDHVLKAYQPRRVLDLGTGTGVLAIAAAKALHGKVLASDIDPPSVSVAEENARLNCT 180 LLLLDHVLK+ +P VLDLGTGTGVLAIAAAKALH VLASDIDPPSV VA EN RLN Sbjct: 142 LLLLDHVLKSSRPSNVLDLGTGTGVLAIAAAKALHRAVLASDIDPPSVRVAAENGRLNEV 201 Query: 181 GDLVDVIRATGFAAPRFAEDGPFDLVLANILANPLRQLAGPMARHLASSAQVILSGLLTH 240 G V VIRATGFAAP FA GPFDLVLANILANPLR LA PMARHLA A+VILSGLLTH Sbjct: 202 GHHVRVIRATGFAAPDFARAGPFDLVLANILANPLRHLASPMARHLAPGARVILSGLLTH 261 Query: 241 QAPAVIAAYRARGLVPLRHLKIEGWSSLLLRSV 273 QAPAVIAAYRARGLVPLRHL+IEGWSSLLLR V Sbjct: 262 QAPAVIAAYRARGLVPLRHLRIEGWSSLLLRKV 294 >ref|YP_001241989.1| 50S ribosomal protein L11P methyltransferase [Bradyrhizobium sp. BTAi1] gb|ABQ38083.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Bradyrhizobium sp. BTAi1] Length = 298 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 212/270 (78%), Positives = 228/270 (84%) Query: 2 VDALSELFFEDQTAFAAFERPDGRWDVTVHFAEPPDQNLLRELVGQVVRQDVASTLVFDT 61 VD L+E+FFE A AAFERPD WDVTVHFA+PPDQ+L+REL+G V TL F Sbjct: 26 VDVLTEVFFEGDAAVAAFERPDLLWDVTVHFADPPDQDLIRELIGGAAGPQVVQTLNFAV 85 Query: 62 VEAKDWVKASLEDLVPVAAGRFIVHGQHDRHRIPPNKLGIEIEAALAFGTGHHGTTRGCL 121 VEAKDWVKASL+DLVPV AGRF+VHG HDR R+P NKLGIEIEAALAFGTGHHGTTRGCL Sbjct: 86 VEAKDWVKASLDDLVPVPAGRFVVHGSHDRSRVPANKLGIEIEAALAFGTGHHGTTRGCL 145 Query: 122 LLLDHVLKAYQPRRVLDLGTGTGVLAIAAAKALHGKVLASDIDPPSVSVAEENARLNCTG 181 LLLDH+LK+ PRRVLDLGTGTGVLAIAAAKA H VLASDIDPPSV+VA ENA LN G Sbjct: 146 LLLDHILKSRVPRRVLDLGTGTGVLAIAAAKAQHRSVLASDIDPPSVAVARENAWLNGVG 205 Query: 182 DLVDVIRATGFAAPRFAEDGPFDLVLANILANPLRQLAGPMARHLASSAQVILSGLLTHQ 241 LV VIRATGFAA FA+ GPFDLVLANILANPLRQLA PM RHLA SA VILSGLLT Q Sbjct: 206 PLVRVIRATGFAAEDFAKAGPFDLVLANILANPLRQLASPMQRHLARSADVILSGLLTTQ 265 Query: 242 APAVIAAYRARGLVPLRHLKIEGWSSLLLR 271 A +VIAAYRARGLVP+RHL+IEGWSSLLLR Sbjct: 266 ARSVIAAYRARGLVPVRHLRIEGWSSLLLR 295 >ref|YP_001207532.1| ribosomal protein L11 methyltransferase (L11 Mtase) [Bradyrhizobium sp. ORS 278] emb|CAL79315.1| Ribosomal protein L11 methyltransferase (L11 Mtase) [Bradyrhizobium sp. ORS 278] Length = 298 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 209/271 (77%), Positives = 225/271 (83%) Query: 2 VDALSELFFEDQTAFAAFERPDGRWDVTVHFAEPPDQNLLRELVGQVVRQDVASTLVFDT 61 VD+L+E+FFE A AAFERPDGRWDVTVHFA+PPDQ LLR+L+G + A TL F+T Sbjct: 26 VDSLTEVFFEGDAAVAAFERPDGRWDVTVHFADPPDQALLRKLIGGAAGTEAAGTLTFET 85 Query: 62 VEAKDWVKASLEDLVPVAAGRFIVHGQHDRHRIPPNKLGIEIEAALAFGTGHHGTTRGCL 121 VE KDWVKASL+DLVPV A RF+VHG HDR R+P NK+GIEIEAALAFGTGHHGTTRGCL Sbjct: 86 VEVKDWVKASLDDLVPVPAARFMVHGAHDRARVPANKIGIEIEAALAFGTGHHGTTRGCL 145 Query: 122 LLLDHVLKAYQPRRVLDLGTGTGVLAIAAAKALHGKVLASDIDPPSVSVAEENARLNCTG 181 LLLDHVLK P+RVLDLGTGTGVLAIAAAKA VL SDID PSVSVA ENARLN G Sbjct: 146 LLLDHVLKRGSPQRVLDLGTGTGVLAIAAAKATRRSVLGSDIDAPSVSVARENARLNGAG 205 Query: 182 DLVDVIRATGFAAPRFAEDGPFDLVLANILANPLRQLAGPMARHLASSAQVILSGLLTHQ 241 LV VIRATGFAA FAE GPFDLVLANILANPLRQLA PM RHLA A VILSGLLT Q Sbjct: 206 PLVQVIRATGFAAAEFAEAGPFDLVLANILANPLRQLAAPMQRHLAPGANVILSGLLTPQ 265 Query: 242 APAVIAAYRARGLVPLRHLKIEGWSSLLLRS 272 A V+AAYRARGLVP+RHL IEGWSSLLL+ Sbjct: 266 ARGVLAAYRARGLVPIRHLTIEGWSSLLLQK 296 >ref|YP_577985.1| ribosomal L11 methyltransferase [Nitrobacter hamburgensis X14] gb|ABE63525.1| [LSU ribosomal protein L11P]-lysine N-methyltransferase [Nitrobacter hamburgensis X14] Length = 298 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 188/274 (68%), Positives = 217/274 (79%) Query: 1 VVDALSELFFEDQTAFAAFERPDGRWDVTVHFAEPPDQNLLRELVGQVVRQDVASTLVFD 60 VVD L+E + +TA AAFER DGRW V +HFA PPD+ +R LV D+A T+ FD Sbjct: 25 VVDLLTESLDDGETAIAAFERSDGRWVVALHFAAPPDEERIRTLVALAAGDDIAQTIAFD 84 Query: 61 TVEAKDWVKASLEDLVPVAAGRFIVHGQHDRHRIPPNKLGIEIEAALAFGTGHHGTTRGC 120 T+ A+DWV+ASLE LVPVAAGRFIVHG+HDR R+PPNKLGIEIEAALAFGTGHHGTTRGC Sbjct: 85 TIAARDWVEASLEGLVPVAAGRFIVHGRHDRARVPPNKLGIEIEAALAFGTGHHGTTRGC 144 Query: 121 LLLLDHVLKAYQPRRVLDLGTGTGVLAIAAAKALHGKVLASDIDPPSVSVAEENARLNCT 180 LLLLDHVL++ PRRVLDLG GTGVLAIAAAKAL VLASDIDP S VA ENA LN Sbjct: 145 LLLLDHVLRSKMPRRVLDLGAGTGVLAIAAAKALRRNVLASDIDPRSTIVARENAVLNGV 204 Query: 181 GDLVDVIRATGFAAPRFAEDGPFDLVLANILANPLRQLAGPMARHLASSAQVILSGLLTH 240 G+LV I ATGF+AP F PFDLVLANILANPLRQ+A MA HLA A VILSGLL H Sbjct: 205 GNLVWSICATGFSAPLFRARAPFDLVLANILANPLRQMAPAMATHLAPEAMVILSGLLPH 264 Query: 241 QAPAVIAAYRARGLVPLRHLKIEGWSSLLLRSVK 274 Q +VIAAYRA+GLV +R ++I+GW SLL+++++ Sbjct: 265 QTRSVIAAYRAQGLVLIRQMRIDGWCSLLMQNLR 298 >ref|ZP_08630943.1| ribosomal protein L11 methyltransferase [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06475.1| ribosomal protein L11 methyltransferase [Bradyrhizobiaceae bacterium SG-6C] Length = 311 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 184/271 (67%), Positives = 215/271 (79%) Query: 1 VVDALSELFFEDQTAFAAFERPDGRWDVTVHFAEPPDQNLLRELVGQVVRQDVASTLVFD 60 +VDA++E + A AAFE P GRWD+T+HF EPPDQ+ +R LV + AS++VF Sbjct: 39 IVDAITESYPSHDLAIAAFEAPSGRWDITMHFGEPPDQDFIRSLVTDTAGEAAASSIVFG 98 Query: 61 TVEAKDWVKASLEDLVPVAAGRFIVHGQHDRHRIPPNKLGIEIEAALAFGTGHHGTTRGC 120 TVE KDWVKASL DLVPV+AGRFIVHG HDR R+PPNKLGIEIEAALAFGTGHHGTTRGC Sbjct: 99 TVETKDWVKASLADLVPVSAGRFIVHGSHDRDRVPPNKLGIEIEAALAFGTGHHGTTRGC 158 Query: 121 LLLLDHVLKAYQPRRVLDLGTGTGVLAIAAAKALHGKVLASDIDPPSVSVAEENARLNCT 180 LLLLD VL P+RVLDLG+GTGVLAIAAAKAL +VLA+DID SV VA ENA+LN Sbjct: 159 LLLLDQVLNQRTPKRVLDLGSGTGVLAIAAAKALRRRVLATDIDVRSVIVASENAQLNGV 218 Query: 181 GDLVDVIRATGFAAPRFAEDGPFDLVLANILANPLRQLAGPMARHLASSAQVILSGLLTH 240 G LV+ + ATGF AP FA +GPF LV+ANILANPLR+LA MARHLA A VILSGLL H Sbjct: 219 GTLVEAVHATGFHAPDFAANGPFGLVMANILANPLRRLAPDMARHLAPHAFVILSGLLPH 278 Query: 241 QAPAVIAAYRARGLVPLRHLKIEGWSSLLLR 271 QA +V+AAYR GL L+ ++I+GWSSLL++ Sbjct: 279 QANSVVAAYRGAGLKLLKRIQIDGWSSLLMQ 309