BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0003.0010.p (185 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002546249.1| hypothetical protein Arad_4646 [Agrobacteriu... 283 1e-74 ref|ZP_03503834.1| hypothetical protein RetlK5_31954 [Rhizobium ... 279 1e-73 ref|YP_001978964.1| hypothetical protein RHECIAT_CH0002835 [Rhiz... 270 8e-71 gb|EGE58132.1| hypothetical protein RHECNPAF_3490011 [Rhizobium ... 265 3e-69 ref|YP_002281874.1| hypothetical protein Rleg2_2373 [Rhizobium l... 254 3e-66 >ref|YP_002546249.1| hypothetical protein Arad_4646 [Agrobacterium radiobacter K84] gb|ACM28316.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 185 Score = 283 bits (723), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 141/185 (76%), Positives = 159/185 (85%) Query: 1 MQSHLSTQSAWLRSYYLGRAIFSVAWVAAAVLFSGQAGPAALLLVIYPAWDGIANLADAR 60 MQ+ STQ +WLRSYY RAIFS+AW+AAA+LFSGQ+ A LLVIYPAWD +ANL DAR Sbjct: 1 MQNQSSTQPSWLRSYYFVRAIFSIAWIAAAILFSGQSHLTAFLLVIYPAWDALANLVDAR 60 Query: 61 VNGGLKANPSQALNVAVSAITTLAVIAALNHSSYAVLAVFGAWAILAGVLQLSTGVRRWR 120 VNGGLKAN SQALNV VS IT LAVI A+++S+YAVLAVFG WAIL+G+LQL T VRRWR Sbjct: 61 VNGGLKANSSQALNVVVSTITALAVIVAVSNSTYAVLAVFGVWAILSGLLQLYTAVRRWR 120 Query: 121 HYGAQWAMILSGAQSALAGGYMISQSIGTVAPTILDVAPYAGFGAFYFLLSAIWLVAAGY 180 HYGAQW MILSGAQSALAGG+MIS+S+GT APTILD+ PY GFGAFYFLLSAIWLV A Y Sbjct: 121 HYGAQWVMILSGAQSALAGGFMISRSLGTAAPTILDITPYVGFGAFYFLLSAIWLVVAAY 180 Query: 181 RHARA 185 R+A A Sbjct: 181 RNANA 185 >ref|ZP_03503834.1| hypothetical protein RetlK5_31954 [Rhizobium etli Kim 5] Length = 185 Score = 279 bits (714), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 140/185 (75%), Positives = 158/185 (85%) Query: 1 MQSHLSTQSAWLRSYYLGRAIFSVAWVAAAVLFSGQAGPAALLLVIYPAWDGIANLADAR 60 MQ++ S Q WLRSYY RA FS+ W+AAA+L GQ+GPAA LLVIYP WD ANL DAR Sbjct: 1 MQNNSSPQPNWLRSYYFTRAAFSLTWIAAAILSGGQSGPAAFLLVIYPLWDAAANLVDAR 60 Query: 61 VNGGLKANPSQALNVAVSAITTLAVIAALNHSSYAVLAVFGAWAILAGVLQLSTGVRRWR 120 VNGGLKANPSQALNV VS ITTLAV+ AL +SYAVLAVFGAWAIL+G+LQLSTGVRRWR Sbjct: 61 VNGGLKANPSQALNVVVSTITTLAVVIALGKNSYAVLAVFGAWAILSGLLQLSTGVRRWR 120 Query: 121 HYGAQWAMILSGAQSALAGGYMISQSIGTVAPTILDVAPYAGFGAFYFLLSAIWLVAAGY 180 YGAQW MILSGAQSALAG +MIS+S+GT +PTILD+ PYAGFGAFYFLLS++WLVAA Y Sbjct: 121 LYGAQWVMILSGAQSALAGAFMISRSLGTASPTILDIVPYAGFGAFYFLLSSLWLVAAAY 180 Query: 181 RHARA 185 R A+A Sbjct: 181 RKAQA 185 >ref|YP_001978964.1| hypothetical protein RHECIAT_CH0002835 [Rhizobium etli CIAT 652] gb|ACE91786.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 185 Score = 270 bits (690), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 138/185 (74%), Positives = 153/185 (82%) Query: 1 MQSHLSTQSAWLRSYYLGRAIFSVAWVAAAVLFSGQAGPAALLLVIYPAWDGIANLADAR 60 MQ + S Q WLRSYY RA FS+ W+AAA+L GQAG AA LLVIYP WD ANL DAR Sbjct: 1 MQDNSSPQLNWLRSYYFTRAAFSLIWIAAAILSGGQAGLAAFLLVIYPLWDAAANLVDAR 60 Query: 61 VNGGLKANPSQALNVAVSAITTLAVIAALNHSSYAVLAVFGAWAILAGVLQLSTGVRRWR 120 VNGG KANPSQALNV VS ITTLAV+ AL S+YAVLAVFGAWAIL+G+LQLSTGVRRWR Sbjct: 61 VNGGFKANPSQALNVVVSTITTLAVVIALGKSNYAVLAVFGAWAILSGLLQLSTGVRRWR 120 Query: 121 HYGAQWAMILSGAQSALAGGYMISQSIGTVAPTILDVAPYAGFGAFYFLLSAIWLVAAGY 180 YGAQW MILSGAQSALAG +MIS+S G +PTILD+ PYAGFGAFYFLLS++WLVAA Y Sbjct: 121 IYGAQWVMILSGAQSALAGAFMISRSFGAASPTILDIVPYAGFGAFYFLLSSLWLVAAAY 180 Query: 181 RHARA 185 R A+A Sbjct: 181 RKAQA 185 >gb|EGE58132.1| hypothetical protein RHECNPAF_3490011 [Rhizobium etli CNPAF512] Length = 185 Score = 265 bits (676), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 136/185 (73%), Positives = 151/185 (81%) Query: 1 MQSHLSTQSAWLRSYYLGRAIFSVAWVAAAVLFSGQAGPAALLLVIYPAWDGIANLADAR 60 MQ + S Q WLRSYY RA FS+ W+A A+L GQA AA LLVIYP WD ANL DAR Sbjct: 1 MQDNSSPQPNWLRSYYFTRAAFSLIWIATAILSGGQANLAAFLLVIYPLWDAAANLVDAR 60 Query: 61 VNGGLKANPSQALNVAVSAITTLAVIAALNHSSYAVLAVFGAWAILAGVLQLSTGVRRWR 120 VNGGLKAN SQALNV VS ITTLAV+ AL S+YAVLAVFGAWAIL+G+LQLSTGVRRWR Sbjct: 61 VNGGLKANRSQALNVVVSTITTLAVVIALGKSNYAVLAVFGAWAILSGLLQLSTGVRRWR 120 Query: 121 HYGAQWAMILSGAQSALAGGYMISQSIGTVAPTILDVAPYAGFGAFYFLLSAIWLVAAGY 180 YGAQW MILSGAQSALAG +MIS+S G +PTILD+ PYAGFGAFYFLLS++WLVAA Y Sbjct: 121 IYGAQWVMILSGAQSALAGAFMISRSFGAASPTILDIVPYAGFGAFYFLLSSLWLVAAAY 180 Query: 181 RHARA 185 R A+A Sbjct: 181 RKAQA 185 >ref|YP_002281874.1| hypothetical protein Rleg2_2373 [Rhizobium leguminosarum bv. trifolii WSM2304] gb|ACI55648.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 185 Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 130/185 (70%), Positives = 147/185 (79%) Query: 1 MQSHLSTQSAWLRSYYLGRAIFSVAWVAAAVLFSGQAGPAALLLVIYPAWDGIANLADAR 60 MQ+ S QS WLRSYY R+ FSV W+AAA+ +GQ AA LLVIYP WD +ANL DAR Sbjct: 1 MQAQSSNQSNWLRSYYFTRSAFSVVWIAAAIALAGQPSAAAFLLVIYPLWDALANLVDAR 60 Query: 61 VNGGLKANPSQALNVAVSAITTLAVIAALNHSSYAVLAVFGAWAILAGVLQLSTGVRRWR 120 NGGL+AN SQ LNVAVS +T+LAV+ AL SSYAVLAVF AWAIL+G+LQL TGVRRWR Sbjct: 61 ANGGLQANLSQTLNVAVSTVTSLAVVIALGVSSYAVLAVFAAWAILSGLLQLYTGVRRWR 120 Query: 121 HYGAQWAMILSGAQSALAGGYMISQSIGTVAPTILDVAPYAGFGAFYFLLSAIWLVAAGY 180 GAQW MILSGAQSALAGG+MI +S+G PTILD+ PYAGFGAFYFLLS+IWLV A Y Sbjct: 121 TEGAQWVMILSGAQSALAGGFMIGRSLGAAPPTILDIVPYAGFGAFYFLLSSIWLVVAAY 180 Query: 181 RHARA 185 R A A Sbjct: 181 RKAHA 185