BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0002.0003.p (154 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002288135.1| regulatory protein, ArsR [Oligotropha carbox... 155 3e-36 ref|YP_001990489.1| Activator of Hsp90 ATPase 1 family protein [... 152 2e-35 ref|NP_946632.1| hypothetical protein RPA1281 [Rhodopseudomonas ... 150 4e-35 ref|ZP_07025199.1| Activator of Hsp90 ATPase 1 family protein [A... 148 2e-34 ref|NP_774000.1| hypothetical protein blr7360 [Bradyrhizobium ja... 146 9e-34 >ref|YP_002288135.1| regulatory protein, ArsR [Oligotropha carboxidovorans OM5] ref|YP_004633763.1| hypothetical protein OCA5_c28300 [Oligotropha carboxidovorans OM5] gb|ACI92270.1| regulatory protein, ArsR [Oligotropha carboxidovorans OM5] gb|AEI03945.1| hypothetical protein OCA4_c28290 [Oligotropha carboxidovorans OM4] gb|AEI07522.1| hypothetical protein OCA5_c28300 [Oligotropha carboxidovorans OM5] Length = 150 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 76/145 (52%), Positives = 100/145 (68%), Gaps = 3/145 (2%) Query: 1 MSKPDYVYVTYIETTADKLWHALTSSEFTERFWFGYRASSDWKVGSPYHLAKDGRRAVQG 60 MSKP++VYVTYI TT DKLWHALT +FT+R+W +SDWKVGS + ++G + Sbjct: 1 MSKPEFVYVTYIRTTPDKLWHALTDKDFTKRYWMDCTLTSDWKVGSRMTMEREGEVKNEC 60 Query: 61 EVLIADPPNRLAYSWD-VVKEGVEREGVSRVTFDIEPHGGVVKLIVTHNNL--GPKTLRD 117 +L +DPP++L+YSW + E + +E S+VT+ IEP G VVKL VTH N G +TL Sbjct: 61 VILESDPPHKLSYSWQSIFDEDMHKEKPSKVTYLIEPRGSVVKLTVTHENFAAGSRTLES 120 Query: 118 ISGGWPMVIASLKSFLETGHELPTD 142 +S GWPMV+ASLKS LETG + D Sbjct: 121 VSSGWPMVLASLKSILETGEPMVLD 145 >ref|YP_001990489.1| Activator of Hsp90 ATPase 1 family protein [Rhodopseudomonas palustris TIE-1] gb|ACF00014.1| Activator of Hsp90 ATPase 1 family protein [Rhodopseudomonas palustris TIE-1] Length = 157 Score = 152 bits (383), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 78/156 (50%), Positives = 101/156 (64%), Gaps = 3/156 (1%) Query: 1 MSKPDYVYVTYIETTADKLWHALTSSEFTERFWFGYRASSDWKVGSPYHLAKDGRRAVQG 60 MSKP++ YVTYI TT D+LWHALT ++FT R+W SDW VGS + + G + Sbjct: 1 MSKPEFAYVTYIRTTPDRLWHALTDADFTRRYWMDCTLRSDWTVGSEMTIERGGEVKNRC 60 Query: 61 EVLIADPPNRLAYSW-DVVKEGVEREGVSRVTFDIEPHGGVVKLIVTHNNL--GPKTLRD 117 ++ +DPP+RLAY W V G+ +E SRVT++IEP G ++KL VTH N G TL Sbjct: 61 TIVESDPPHRLAYDWVSVWDPGMRQEKPSRVTYEIEPQGDLIKLTVTHQNFTQGSTTLPS 120 Query: 118 ISGGWPMVIASLKSFLETGHELPTDLLTSSAREAYH 153 IS GWPMV+ASLKS LETG LP + +A E+ H Sbjct: 121 ISFGWPMVLASLKSILETGQPLPFAPQSHAAAESAH 156 >ref|NP_946632.1| hypothetical protein RPA1281 [Rhodopseudomonas palustris CGA009] emb|CAE26724.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 157 Score = 150 bits (380), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 3/156 (1%) Query: 1 MSKPDYVYVTYIETTADKLWHALTSSEFTERFWFGYRASSDWKVGSPYHLAKDGRRAVQG 60 MSKP++ YVTYI TT D+LWHALT ++FT R+W SDW VGS + + G + Sbjct: 1 MSKPEFAYVTYIRTTPDRLWHALTDADFTRRYWMDCTLRSDWTVGSEMTMERGGEIKNRC 60 Query: 61 EVLIADPPNRLAYSW-DVVKEGVEREGVSRVTFDIEPHGGVVKLIVTHNNL--GPKTLRD 117 ++ +DPP+RLAY W V + +E SRVT++IEP G +VKL VTH N G TL Sbjct: 61 TIVESDPPHRLAYDWVSVWDPAMRQEKPSRVTYEIEPQGDLVKLTVTHQNFTQGSTTLPS 120 Query: 118 ISGGWPMVIASLKSFLETGHELPTDLLTSSAREAYH 153 IS GWPMV+ASLKS LETG LP + +A E+ H Sbjct: 121 ISFGWPMVLASLKSILETGQPLPFAPQSHAAAESAH 156 >ref|ZP_07025199.1| Activator of Hsp90 ATPase 1 family protein [Afipia sp. 1NLS2] gb|EFI52341.1| Activator of Hsp90 ATPase 1 family protein [Afipia sp. 1NLS2] Length = 147 Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 76/142 (53%), Positives = 96/142 (67%), Gaps = 3/142 (2%) Query: 1 MSKPDYVYVTYIETTADKLWHALTSSEFTERFWFGYRASSDWKVGSPYHLAKDGRRAVQG 60 MSKP++VYVTYI+TT +KLWHALT FTE++W+ +SDWKVGS H+ + G + Sbjct: 1 MSKPEFVYVTYIKTTPEKLWHALTDKAFTEKYWYCCSLTSDWKVGSRMHMDRGGEVKNEC 60 Query: 61 EVLIADPPNRLAYSWD-VVKEGVEREGVSRVTFDIEPHGGVVKLIVTHNNLGP--KTLRD 117 +L +DPP RL+YSW V E + +E SRVT+ IEP VKL VTH P KTL Sbjct: 61 VILESDPPRRLSYSWQSVFDEEMRKEKPSRVTYVIEPSYDGVKLTVTHEGFAPDSKTLPS 120 Query: 118 ISGGWPMVIASLKSFLETGHEL 139 IS GWP+V++SLKS LETG L Sbjct: 121 ISTGWPLVLSSLKSILETGQPL 142 >ref|NP_774000.1| hypothetical protein blr7360 [Bradyrhizobium japonicum USDA 110] dbj|BAC52625.1| blr7360 [Bradyrhizobium japonicum USDA 110] Length = 156 Score = 146 bits (369), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 76/142 (53%), Positives = 95/142 (66%), Gaps = 3/142 (2%) Query: 1 MSKPDYVYVTYIETTADKLWHALTSSEFTERFWFGYRASSDWKVGSPYHLAKDGRRAVQG 60 MSKP +VYV+YIET+ +KLW ALTSSEFT ++WFG SDWKVGSP+ L DG G Sbjct: 1 MSKPQFVYVSYIETSPEKLWEALTSSEFTRQYWFGAEIRSDWKVGSPFALLLDGEITDSG 60 Query: 61 EVLIADPPNRLAYSWDVVK-EGVEREGVSRVTFDIEPHGGVVKLIVTHNNL--GPKTLRD 117 E+L ADPP RL+YS+ K E + E +SRV F IEP G +V+L V H+ G K L Sbjct: 61 EILEADPPRRLSYSFKHQKYEELRGEPISRVVFTIEPFGSLVRLTVLHDGFVEGGKYLGA 120 Query: 118 ISGGWPMVIASLKSFLETGHEL 139 +S GWP +++ LKS LE G L Sbjct: 121 VSNGWPAILSGLKSLLERGKVL 142