BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0055.p         (196 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_02356194.1| hypothetical protein BoklE_12041 [Burkholderi...    62   7e-08
ref|ZP_01303956.1| hypothetical protein SKA58_07523 [Sphingomona...    44   0.017
ref|YP_004472496.1| peptidase M48 Ste24p [Pseudomonas fulva 12-X...    37   1.9  

>ref|ZP_02356194.1| hypothetical protein BoklE_12041 [Burkholderia oklahomensis EO147]
          Length = 154

 Score = 61.6 bits (148), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/113 (42%), Positives = 56/113 (49%)

Query: 4   SATAAGSVSGGTCSLTEDCQAGPNSAMPLPTTKHSASRMFGVTRLSQASTVRMVAPVSAI 63
           SA AA S   GTCS+T DC AG N A   P T    SR  GV   +  S  R  A  +  
Sbjct: 41  SAIAADSSCAGTCSVTADCHAGWNIAPAQPPTNMQTSRRIGVIAPAATSATRHSATENIS 100

Query: 64  ASDTSATMRRSCMSAMAPGGIEISITGSIKAVCTSATLSASAVICVIAQAAPT 116
             D+S T+RRS  SA  P     S  GS+ AVCTS T+     I VI+  A T
Sbjct: 101 DCDSSITVRRSHASAATPDISANSAIGSVNAVCTSETIVGDGAIDVISHEAAT 153


>ref|ZP_01303956.1| hypothetical protein SKA58_07523 [Sphingomonas sp. SKA58]
 gb|EAT08278.1| hypothetical protein SKA58_07523 [Sphingomonas sp. SKA58]
          Length = 61

 Score = 43.5 bits (101), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 32/60 (53%)

Query: 88  ITGSIKAVCTSATLSASAVICVIAQAAPTPWIRMPRLESRLASQIRRKIECRNGAVILSE 147
           + G + A  TSA     A   VI  AAPT WI  P+L++RLA+QI R      G   L+E
Sbjct: 1   MIGRVVAAGTSAISKGDAERDVIIHAAPTDWISPPKLDARLANQIARNTGMEKGDAGLAE 60


>ref|YP_004472496.1| peptidase M48 Ste24p [Pseudomonas fulva 12-X]
 gb|AEF20402.1| peptidase M48 Ste24p [Pseudomonas fulva 12-X]
          Length = 477

 Score = 36.6 bits (83), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 6/79 (7%)

Query: 9   GSVSGGTCSLTEDCQ--AGPNSAMPL-PTTKHSASRM-FGVTRLSQASTVRMVAPVSAIA 64
           G+V G   S TED Q  A  NS  PL P  +  A  +   + R++   TV+  A  S +A
Sbjct: 389 GAVKGRAASATEDAQMLAAINSFRPLQPAERKLAEPLRLQLVRVTPGQTVKSFAAGSGLA 448

Query: 65  SDTSATMRRSCMSAMAPGG 83
           SD  AT+R   ++A+ P G
Sbjct: 449 SDAEATLR--LLNALYPQG 465