BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0049.p (247 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001236473.1| glutamine amidotransferase [Bradyrhizobium s... 383 e-104 ref|YP_001202488.1| glutamine amidotransferase [Bradyrhizobium s... 382 e-104 ref|NP_767193.1| glutamine amidotransferase [Bradyrhizobium japo... 372 e-101 ref|YP_778994.1| glutamine amidotransferase [Rhodopseudomonas pa... 368 e-100 ref|YP_529954.1| glutamine amidotransferase [Rhodopseudomonas pa... 367 e-99 >ref|YP_001236473.1| glutamine amidotransferase [Bradyrhizobium sp. BTAi1] gb|ABQ32567.1| putative glutamine amidotransferase class-I [Bradyrhizobium sp. BTAi1] Length = 269 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 186/242 (76%), Positives = 206/242 (85%) Query: 6 AQVSLRPVLIVLHRETSTPGRVGNALRALGYRLDIRRPRFGDALPATLDGHAGAVIFGGP 65 A RPVLI+LH+ETS+PGRVGNALRA GY LDIRRPRFGD LP TLD HAGAVIFGGP Sbjct: 28 AATPRRPVLIILHQETSSPGRVGNALRARGYPLDIRRPRFGDPLPETLDEHAGAVIFGGP 87 Query: 66 MSANDGDDYVRREIDWIAVPLREQRPFLGICLGAQMLARQLGAKVAPHPQGRVEVGYYPV 125 MSAND D++VRREIDWI VPLREQRPFLGICLGAQMLA QLGAKVAPHP+GR E+GYYP+ Sbjct: 88 MSANDPDEFVRREIDWIDVPLREQRPFLGICLGAQMLAMQLGAKVAPHPEGRAEIGYYPI 147 Query: 126 RPTEAGRALCPDWPARVYHWHGEGFQLPAGADLLASGDDFPVQAFQFGNAFGLQFHPDVT 185 RPT+AGR LCP WP VYHWH EGF LPAGA+LLA G DFPVQA+Q+ NA GLQFHPDVT Sbjct: 148 RPTQAGRRLCPHWPDHVYHWHREGFDLPAGAELLAEGGDFPVQAYQYDNATGLQFHPDVT 207 Query: 186 YAMMHRWTARGCARMDSPGAQPGHLHFAERAVHDAAERAWLKHFIDGWIARVPQRQLLQA 245 YAMM RWT RG AR+D+PGA+P H HF RAVHD AERAWL+HF+DGW+AR P + +A Sbjct: 208 YAMMCRWTTRGHARLDTPGARPRHHHFDGRAVHDTAERAWLQHFLDGWLARRPVAAMAEA 267 Query: 246 AE 247 AE Sbjct: 268 AE 269 >ref|YP_001202488.1| glutamine amidotransferase [Bradyrhizobium sp. ORS 278] emb|CAL74238.1| putative glutamine amidotransferase class-I [Bradyrhizobium sp. ORS 278] Length = 248 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 184/235 (78%), Positives = 202/235 (85%) Query: 13 VLIVLHRETSTPGRVGNALRALGYRLDIRRPRFGDALPATLDGHAGAVIFGGPMSANDGD 72 VLI+LH+ETS+PGR+GNALRA GYRLDIRRPRFGD LP TL H+GAVIFGGPMSAND D Sbjct: 14 VLIILHQETSSPGRIGNALRARGYRLDIRRPRFGDPLPKTLAEHSGAVIFGGPMSANDPD 73 Query: 73 DYVRREIDWIAVPLREQRPFLGICLGAQMLARQLGAKVAPHPQGRVEVGYYPVRPTEAGR 132 D+VRREIDWI VPLREQRPFLGICLGAQMLA QLGAKVAPHPQGR E+GYYP+RPT AG+ Sbjct: 74 DFVRREIDWIEVPLREQRPFLGICLGAQMLAIQLGAKVAPHPQGRAEIGYYPIRPTRAGK 133 Query: 133 ALCPDWPARVYHWHGEGFQLPAGADLLASGDDFPVQAFQFGNAFGLQFHPDVTYAMMHRW 192 LCP WP VYHWH EGF LP+GADLLA G DFPVQA+Q+GNA GLQFHPDVTYAMM RW Sbjct: 134 RLCPHWPDNVYHWHREGFDLPSGADLLAEGVDFPVQAYQYGNATGLQFHPDVTYAMMCRW 193 Query: 193 TARGCARMDSPGAQPGHLHFAERAVHDAAERAWLKHFIDGWIARVPQRQLLQAAE 247 T RG AR+D+PGA P H HF RAVHDAAER WLKHF+DGW+AR P + +AAE Sbjct: 194 TTRGHARLDTPGACPRHHHFEGRAVHDAAERVWLKHFLDGWLARQPVAAMAEAAE 248 >ref|NP_767193.1| glutamine amidotransferase [Bradyrhizobium japonicum USDA 110] dbj|BAC45818.1| GMP synthase [Bradyrhizobium japonicum USDA 110] Length = 267 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 181/236 (76%), Positives = 204/236 (86%), Gaps = 2/236 (0%) Query: 12 PVLIVLHRETSTPGRVGNALRALGYRLDIRRPRFGDALPATLDGHAGAVIFGGPMSANDG 71 PVLIVLH+E+STPGRVGNALRALG+RLDIRRPRFGD LP TLD HAGAV+FGGPMSAND Sbjct: 34 PVLIVLHQESSTPGRVGNALRALGHRLDIRRPRFGDPLPETLDQHAGAVVFGGPMSANDP 93 Query: 72 DDYVRREIDWIAVPLREQRPFLGICLGAQMLARQLGAKVAPHPQGRVEVGYYPVRPTEAG 131 DDY+RREIDWI +PLREQRPFLGICLGAQMLA QLGA+VAPH + ++GYYP+RPT AG Sbjct: 94 DDYIRREIDWIEIPLREQRPFLGICLGAQMLAMQLGARVAPHAEALTQIGYYPIRPTAAG 153 Query: 132 RALCPDWPARVYHWHGEGFQLPAGADLLASGDDFPVQAFQFGNAFGLQFHPDVTYAMMHR 191 ALCP WPA+VYHWH EGF+LPAG +LLA GDDFPVQAF+ G+AFG+QFHPDVTYAMMHR Sbjct: 154 HALCPAWPAQVYHWHREGFELPAGTELLAEGDDFPVQAFRAGHAFGVQFHPDVTYAMMHR 213 Query: 192 WTARGCARMDSPGAQPGHLHFAERAVHDAAERAWLKHFIDGWIARVPQRQLLQAAE 247 WT RG +PGA+ H HFA+RAV+DAAERAWL HFI+GW+AR P L QAAE Sbjct: 214 WTTRGYDGFSAPGARERHHHFADRAVYDAAERAWLDHFINGWLARRP--LLAQAAE 267 >ref|YP_778994.1| glutamine amidotransferase [Rhodopseudomonas palustris BisA53] gb|ABJ04014.1| glutamine amidotransferase class-I [Rhodopseudomonas palustris BisA53] Length = 279 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 173/235 (73%), Positives = 200/235 (85%) Query: 4 MSAQVSLRPVLIVLHRETSTPGRVGNALRALGYRLDIRRPRFGDALPATLDGHAGAVIFG 63 + +++ LRPVLIVLH+E+STPGRVGNALR LG+ LDIRRPRFGD LP TL+ HAGAVIFG Sbjct: 32 VPSRIDLRPVLIVLHQESSTPGRVGNALRLLGHPLDIRRPRFGDCLPQTLEHHAGAVIFG 91 Query: 64 GPMSANDGDDYVRREIDWIAVPLREQRPFLGICLGAQMLARQLGAKVAPHPQGRVEVGYY 123 GPMSAND DDY+RREIDWIAVPL E RPFLGICLGAQMLA QLGAKVAPHP+GR ++GYY Sbjct: 92 GPMSANDPDDYIRREIDWIAVPLSESRPFLGICLGAQMLAMQLGAKVAPHPEGRAQIGYY 151 Query: 124 PVRPTEAGRALCPDWPARVYHWHGEGFQLPAGADLLASGDDFPVQAFQFGNAFGLQFHPD 183 P+RPT AGRA+C +WP +VYHWH EGF+LP G++LLA G DFPV+AF+ G+AFGLQFHPD Sbjct: 152 PIRPTAAGRAICMEWPEQVYHWHREGFELPVGSELLAEGSDFPVEAFRSGHAFGLQFHPD 211 Query: 184 VTYAMMHRWTARGCARMDSPGAQPGHLHFAERAVHDAAERAWLKHFIDGWIARVP 238 VT MMHRWT G AR+D PGA+P HF +RAVHD AERAWL F+D W+AR P Sbjct: 212 VTTLMMHRWTTLGHARLDLPGARPRQHHFTDRAVHDMAERAWLCAFLDNWLARTP 266 >ref|YP_529954.1| glutamine amidotransferase [Rhodopseudomonas palustris BisB18] gb|ABD85635.1| glutamine amidotransferase class-I [Rhodopseudomonas palustris BisB18] Length = 260 Score = 367 bits (942), Expect = e-99, Method: Compositional matrix adjust. Identities = 178/243 (73%), Positives = 205/243 (84%), Gaps = 4/243 (1%) Query: 9 SLRPVLIVLHRETSTPGRVGNALRALGYRLDIRRPRFGDALPATLDGHAGAVIFGGPMSA 68 LRPVLI+LH+E STPGRVGNALR LG+ LD+RRPRFGD LPATL+ HAGAVIFGGPMSA Sbjct: 18 DLRPVLIILHQEMSTPGRVGNALRLLGHPLDVRRPRFGDPLPATLEHHAGAVIFGGPMSA 77 Query: 69 NDGDDYVRREIDWIAVPLREQRPFLGICLGAQMLARQLGAKVAPHPQGRVEVGYYPVRPT 128 ND DD+VRREIDWIAVPL+E RPFLGICLGAQMLA QLGA+VAPH +GR ++GYYP+RPT Sbjct: 78 NDPDDFVRREIDWIAVPLKEDRPFLGICLGAQMLAVQLGARVAPHAEGRAQIGYYPIRPT 137 Query: 129 EAGRALCPDWPARVYHWHGEGFQLPAGADLLASGDDFPVQAFQFGNAFGLQFHPDVTYAM 188 AGRA+C DWP +VYHWH EGF LP A+LLA G DFPV+AF+ G+AFG QFHPDVTYAM Sbjct: 138 AAGRAICADWPEQVYHWHREGFDLPVDAELLAEGSDFPVEAFRAGHAFGFQFHPDVTYAM 197 Query: 189 MHRWTARGCARMDSPGAQPGHLHFAERAVHDAAERAWLKHFIDGWIAR----VPQRQLLQ 244 MHRWT RG ARMD PGA+P H HF++RAVHD AERAWL+ F++ W+A+ VP + Q Sbjct: 198 MHRWTTRGHARMDLPGARPRHDHFSDRAVHDVAERAWLREFLNVWLAQMPLIVPDAGMAQ 257 Query: 245 AAE 247 AAE Sbjct: 258 AAE 260