BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0001.0046.p         (111 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_529956.1| hypothetical protein RPC_0058 [Rhodopseudomonas...   172   1e-41
ref|ZP_08627948.1| hypothetical protein CSIRO_1018 [Bradyrhizobi...   169   1e-40
ref|YP_778989.1| hypothetical protein RPE_0048 [Rhodopseudomonas...   165   2e-39
ref|NP_945767.1| hypothetical protein RPA0414 [Rhodopseudomonas ...   164   6e-39
ref|YP_001989454.1| hypothetical protein Rpal_0418 [Rhodopseudom...   163   7e-39

>ref|YP_529956.1| hypothetical protein RPC_0058 [Rhodopseudomonas palustris BisB18]
 sp|Q21D99.1|Y058_RHOPB RecName: Full=UPF0235 protein RPC_0058
 gb|ABD85637.1| protein of unknown function DUF167 [Rhodopseudomonas palustris
           BisB18]
          Length = 107

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 87/105 (82%), Positives = 96/105 (91%)

Query: 2   DPWRYSTEGISIALRVTPRGGRDDIDGIETLANGRSVVKVRVRAIAEGGEANRAVTELLA 61
           + WRYS +GIS+ALRVTPRGGRDDIDG+ETLANGR+VVKVRVRAIAEGGEANRAVTELLA
Sbjct: 3   EAWRYSAQGISVALRVTPRGGRDDIDGLETLANGRTVVKVRVRAIAEGGEANRAVTELLA 62

Query: 62  KALGVPKARVKLLSGATSRLKQVAVDGDPKGLGDTLRKLTAAKPN 106
           KALGVPK  V++LSG TSRLKQVAVDGDP  LG+ LRKLTA KP+
Sbjct: 63  KALGVPKRAVRVLSGTTSRLKQVAVDGDPNELGEALRKLTAPKPD 107


>ref|ZP_08627948.1| hypothetical protein CSIRO_1018 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP09477.1| hypothetical protein CSIRO_1018 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 105

 Score =  169 bits (427), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 85/99 (85%), Positives = 92/99 (92%)

Query: 3   PWRYSTEGISIALRVTPRGGRDDIDGIETLANGRSVVKVRVRAIAEGGEANRAVTELLAK 62
           PWR+S +GIS+ALRVTPRGG D IDGIETLANGRSVVKVRVRAIAEGGEANRAVTELLAK
Sbjct: 4   PWRFSVQGISVALRVTPRGGLDAIDGIETLANGRSVVKVRVRAIAEGGEANRAVTELLAK 63

Query: 63  ALGVPKARVKLLSGATSRLKQVAVDGDPKGLGDTLRKLT 101
           AL VPK+ V++LSGATSRLKQVAVDGDPK LGDTL+ LT
Sbjct: 64  ALHVPKSHVRVLSGATSRLKQVAVDGDPKKLGDTLQALT 102


>ref|YP_778989.1| hypothetical protein RPE_0048 [Rhodopseudomonas palustris BisA53]
 gb|ABJ04009.1| protein of unknown function DUF167 [Rhodopseudomonas palustris
           BisA53]
          Length = 107

 Score =  165 bits (417), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 84/103 (81%), Positives = 94/103 (91%)

Query: 1   MDPWRYSTEGISIALRVTPRGGRDDIDGIETLANGRSVVKVRVRAIAEGGEANRAVTELL 60
           M+ WRYS +GIS+ALRVTPRGGRD IDG+ETLANGR+VVKVRVRAIAEGGEANRAVTELL
Sbjct: 1   MEAWRYSADGISVALRVTPRGGRDAIDGLETLANGRTVVKVRVRAIAEGGEANRAVTELL 60

Query: 61  AKALGVPKARVKLLSGATSRLKQVAVDGDPKGLGDTLRKLTAA 103
           AKALGVPK  V++LSG TSRLKQ+AVDG+P+ LG  LRKLTAA
Sbjct: 61  AKALGVPKRAVRVLSGTTSRLKQIAVDGNPELLGAALRKLTAA 103


>ref|NP_945767.1| hypothetical protein RPA0414 [Rhodopseudomonas palustris CGA009]
 emb|CAE25858.1| DUF167 [Rhodopseudomonas palustris CGA009]
          Length = 112

 Score =  164 bits (414), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 79/106 (74%), Positives = 96/106 (90%)

Query: 2   DPWRYSTEGISIALRVTPRGGRDDIDGIETLANGRSVVKVRVRAIAEGGEANRAVTELLA 61
           + WRYS +G+++A+RVTPRGGRDDIDG+ETL++GR VVKVRVRAIA+GGEANRAVTELLA
Sbjct: 7   EAWRYSAQGVAVAVRVTPRGGRDDIDGLETLSDGRPVVKVRVRAIADGGEANRAVTELLA 66

Query: 62  KALGVPKARVKLLSGATSRLKQVAVDGDPKGLGDTLRKLTAAKPNQ 107
           KA+GVPK  V+LLSGATSR KQ+A+DGDPK LG+ LR+L AAKP +
Sbjct: 67  KAVGVPKRNVRLLSGATSRQKQIAIDGDPKQLGEALRRLVAAKPAE 112


>ref|YP_001989454.1| hypothetical protein Rpal_0418 [Rhodopseudomonas palustris TIE-1]
 sp|B3QA92.1|Y418_RHOPT RecName: Full=UPF0235 protein Rpal_0418
 gb|ACE98978.1| protein of unknown function DUF167 [Rhodopseudomonas palustris
           TIE-1]
          Length = 108

 Score =  163 bits (413), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 79/106 (74%), Positives = 96/106 (90%)

Query: 2   DPWRYSTEGISIALRVTPRGGRDDIDGIETLANGRSVVKVRVRAIAEGGEANRAVTELLA 61
           + WRYS +G+++A+RVTPRGGRDDIDG+ETL++GR VVKVRVRAIA+GGEANRAVTELLA
Sbjct: 3   EAWRYSAQGVAVAVRVTPRGGRDDIDGLETLSDGRPVVKVRVRAIADGGEANRAVTELLA 62

Query: 62  KALGVPKARVKLLSGATSRLKQVAVDGDPKGLGDTLRKLTAAKPNQ 107
           KA+GVPK  V+LLSGATSR KQ+A+DGDPK LG+ LR+L AAKP +
Sbjct: 63  KAVGVPKRNVRLLSGATSRQKQIAIDGDPKQLGEALRRLVAAKPAE 108