BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0042.p (155 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767185.1| hypothetical protein bll0545 [Bradyrhizobium ja... 247 5e-64 ref|YP_001236467.1| hypothetical protein BBta_0266 [Bradyrhizobi... 229 1e-58 ref|YP_001202481.1| hypothetical protein BRADO0271 [Bradyrhizobi... 224 3e-57 ref|ZP_01226810.1| putative integral membrane protein [Aurantimo... 190 6e-47 ref|YP_004612870.1| hypothetical protein Mesop_4347 [Mesorhizobi... 174 4e-42 >ref|NP_767185.1| hypothetical protein bll0545 [Bradyrhizobium japonicum USDA 110] dbj|BAC45810.1| bll0545 [Bradyrhizobium japonicum USDA 110] Length = 155 Score = 247 bits (630), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 121/155 (78%), Positives = 136/155 (87%) Query: 1 MTLYFLIKYLHLLGAIVILGTGTGIAFFMLAAHRTQDAAFIARTAATVVIADMIFTLTAV 60 MTLYFL+KYLH+LGAIVILGTGTGIAFFML AHRT DA FIARTA+ VVIAD IFTL+AV Sbjct: 1 MTLYFLVKYLHVLGAIVILGTGTGIAFFMLMAHRTHDADFIARTASVVVIADAIFTLSAV 60 Query: 61 LLQPVSGGLLMLLSATSIAERWLAVSLALYALAGVFWVPVVFMQIEMRNLAQAAVEKGLP 120 +LQPVSGGLLM+LSATS ERWL SLALYA+AG+FW+PVVFMQIEMR+LA+ A E+ Sbjct: 61 ILQPVSGGLLMMLSATSFTERWLLASLALYAIAGLFWIPVVFMQIEMRDLARKASEQRAA 120 Query: 121 LPPRYFALFRRWFLFGIPGFGSVMIILWLMIAKPF 155 LP RYF LFRRWF FG PGFG+ M+ILWLM+AKPF Sbjct: 121 LPERYFVLFRRWFAFGFPGFGATMLILWLMVAKPF 155 >ref|YP_001236467.1| hypothetical protein BBta_0266 [Bradyrhizobium sp. BTAi1] gb|ABQ32561.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 155 Score = 229 bits (584), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 120/155 (77%), Positives = 136/155 (87%) Query: 1 MTLYFLIKYLHLLGAIVILGTGTGIAFFMLAAHRTQDAAFIARTAATVVIADMIFTLTAV 60 MTLYFL+KYLH+LGAIVILGTGTGIAFFML AH + AAFIARTA VVIADM+FTL+AV Sbjct: 1 MTLYFLVKYLHVLGAIVILGTGTGIAFFMLMAHLSGQAAFIARTAGVVVIADMLFTLSAV 60 Query: 61 LLQPVSGGLLMLLSATSIAERWLAVSLALYALAGVFWVPVVFMQIEMRNLAQAAVEKGLP 120 LLQP+SGG LM LS+TS++ERWL SL LYALAG+FWVPV+FMQIE+R+LA+AA P Sbjct: 61 LLQPISGGTLMWLSSTSLSERWLTTSLVLYALAGLFWVPVIFMQIELRDLARAADADAQP 120 Query: 121 LPPRYFALFRRWFLFGIPGFGSVMIILWLMIAKPF 155 LPPRYF +FRRWF+ GIPGFGSVM ILWLMIAKPF Sbjct: 121 LPPRYFTVFRRWFICGIPGFGSVMAILWLMIAKPF 155 >ref|YP_001202481.1| hypothetical protein BRADO0271 [Bradyrhizobium sp. ORS 278] emb|CAL74231.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 156 Score = 224 bits (572), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 112/155 (72%), Positives = 131/155 (84%) Query: 1 MTLYFLIKYLHLLGAIVILGTGTGIAFFMLAAHRTQDAAFIARTAATVVIADMIFTLTAV 60 MT+YFL+KYLH+LGAIVILGTGTGIAFFML AH + +AAFIARTA VVIADM+FTL+AV Sbjct: 2 MTVYFLVKYLHVLGAIVILGTGTGIAFFMLMAHLSGEAAFIARTAGVVVIADMLFTLSAV 61 Query: 61 LLQPVSGGLLMLLSATSIAERWLAVSLALYALAGVFWVPVVFMQIEMRNLAQAAVEKGLP 120 LLQPV+GG LM LS+ ++ + WL SL LY +AG+FWV VVFMQIE+R+LA+AA + Sbjct: 62 LLQPVTGGALMWLSSAAVTDGWLLTSLVLYVVAGLFWVAVVFMQIELRDLARAADSRTEK 121 Query: 121 LPPRYFALFRRWFLFGIPGFGSVMIILWLMIAKPF 155 L PRYF +FRRWFL GIPGFGSVM ILWLMIAKPF Sbjct: 122 LTPRYFTVFRRWFLCGIPGFGSVMAILWLMIAKPF 156 >ref|ZP_01226810.1| putative integral membrane protein [Aurantimonas manganoxydans SI85-9A1] gb|EAS50684.1| putative integral membrane protein [Aurantimonas manganoxydans SI85-9A1] Length = 165 Score = 190 bits (482), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 93/151 (61%), Positives = 118/151 (78%) Query: 4 YFLIKYLHLLGAIVILGTGTGIAFFMLAAHRTQDAAFIARTAATVVIADMIFTLTAVLLQ 63 Y L+KYLH++GAIV+LGTGTGIAFFML AHR++DAAF+ARTA VV ADM+FT TAV+ Q Sbjct: 13 YLLLKYLHVIGAIVLLGTGTGIAFFMLMAHRSKDAAFVARTAGVVVTADMVFTATAVIAQ 72 Query: 64 PVSGGLLMLLSATSIAERWLAVSLALYALAGVFWVPVVFMQIEMRNLAQAAVEKGLPLPP 123 PV+G L ++ + E WL ++L LY +AGVFW+PVV++Q MR+LA+ A G LPP Sbjct: 73 PVTGYGLAEMTGVPLWEGWLGLALILYGVAGVFWLPVVWIQARMRDLARDAARAGRELPP 132 Query: 124 RYFALFRRWFLFGIPGFGSVMIILWLMIAKP 154 Y L+R WF+ GIPGFGSV+ ILWLMIA+P Sbjct: 133 AYHRLYRIWFVLGIPGFGSVLTILWLMIARP 163 >ref|YP_004612870.1| hypothetical protein Mesop_4347 [Mesorhizobium opportunistum WSM2075] gb|AEH88776.1| Protein of unknown function DUF2269, transmembrane [Mesorhizobium opportunistum WSM2075] Length = 160 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 91/153 (59%), Positives = 116/153 (75%), Gaps = 2/153 (1%) Query: 3 LYFLIKYLHLLGAIVILGTGTGIAFFMLAAHRTQDAAFIARTAATVVIADMIFTLTAVLL 62 +YF++KYLH++GA V+LGTG GIAFFML AHRT +AA IA A VV+AD +FT TAV+ Sbjct: 2 MYFVLKYLHVIGAAVLLGTGAGIAFFMLMAHRTGNAATIAAVARIVVLADFLFTATAVVA 61 Query: 63 QPVSGGLLMLLSATSIAERWLAVSLALYALAGVFWVPVVFMQIEMRNLA-QAAVEKGLPL 121 QP++G L L+ S++E W+ +S+ LY GVFW+PVV+MQIEMRNLA QAA+ P Sbjct: 62 QPLTGLGLAWLAGYSLSEGWIVLSILLYIATGVFWLPVVWMQIEMRNLATQAALSNQAP- 120 Query: 122 PPRYFALFRRWFLFGIPGFGSVMIILWLMIAKP 154 P RY LFRRWF+FG P FG+V+ I WLMIA+P Sbjct: 121 PERYNQLFRRWFVFGFPAFGAVLAIFWLMIARP 153