BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0001.0029.p (581 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773610.1| alkaline protease secretion ATP-binding protein... 1003 0.0 ref|YP_002974126.1| type I secretion system ATPase [Rhizobium le... 567 e-159 ref|YP_001372508.1| type I secretion system ATPase [Ochrobactrum... 561 e-158 ref|YP_001976835.1| protein ABC transporter protein [Rhizobium e... 544 e-152 gb|EGE58623.1| putative protein ABC transporter protein [Rhizobi... 540 e-151 >ref|NP_773610.1| alkaline protease secretion ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC52235.1| aprD [Bradyrhizobium japonicum USDA 110] Length = 617 Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust. Identities = 508/581 (87%), Positives = 534/581 (91%) Query: 1 VTIMLMPPIRLPVLPQIATPLHAALWCCAGPLGLVFAYSCSYNLLLFAPSIYLLQIYDRV 60 VTIMLMPPIRLP+LPQ+ TPLHAAL C GPLGLVFAYSCSYNLLLFAPSIYLLQIYDRV Sbjct: 37 VTIMLMPPIRLPILPQVRTPLHAALRSCVGPLGLVFAYSCSYNLLLFAPSIYLLQIYDRV 96 Query: 61 LSSRSGDTLLLLTLIVAITVVVGGVFDALRRAVLGRLGAWLDDRLRPCVLSASLESAFRG 120 LSSRSG+TLLLLTLIVAITVVVGGVFDALRRAVLGRLGAWLDDRLRPCV+SA LESA R Sbjct: 97 LSSRSGETLLLLTLIVAITVVVGGVFDALRRAVLGRLGAWLDDRLRPCVISAGLESALRS 156 Query: 121 DWTRASDAYRDLTVLRQFIDSGACPMLFDALWAPLFLLVLFLIHPLLGVVGACCVAFLFA 180 DWT+AS AYRDLTVLRQF++SGA PMLFDALWAPLFLLVL LIHPLLGVVGACCVAFLFA Sbjct: 157 DWTQASGAYRDLTVLRQFVESGASPMLFDALWAPLFLLVLVLIHPLLGVVGACCVAFLFA 216 Query: 181 LTVAGDLVTEDVLLRSGAALSRSYGRLQAAAGNIHMIRAMGMLDSAARTIYHDAQEARRE 240 LTVAG+LVTEDVLLRSGAALSRS GRLQ AA NIHMIRAMGMLDSAAR I+ DAQ ARRE Sbjct: 217 LTVAGELVTEDVLLRSGAALSRSCGRLQTAASNIHMIRAMGMLDSAARMIHRDAQHARRE 276 Query: 241 HDVAVRRSEIVMLVTKPVRALSQVLIMGAAAWLVLDHGKSPAIIFASTLMFSRALAPVES 300 HDVA+RR EIV L KPVRALSQVLIMGAAAWLVLDHGKSPAIIFASTLMFSRALAPVES Sbjct: 277 HDVALRRGEIVSLAAKPVRALSQVLIMGAAAWLVLDHGKSPAIIFASTLMFSRALAPVES 336 Query: 301 AIAGWKSLRTAVSACQRLGAVLVASPAAGQQDPEVSQRQASSGLVVDNVGVRLSGTNHLL 360 A+AGWKSL TAVSACQRLGA+L A P A QQ PEVS QA SGLVVDNV VRL+GTNHLL Sbjct: 337 AVAGWKSLVTAVSACQRLGALLAAFPVARQQSPEVSPLQARSGLVVDNVDVRLAGTNHLL 396 Query: 361 LNGVSFTLASGECLGIIGASGSGKSLLGRVIAGLSTPTDGCVLLDNTDVSLLREGLGGHR 420 LNGVSF+L GECLGIIG SGSGKSLLG+VIAGLS PT G V+LDNTDVSL REGL G R Sbjct: 397 LNGVSFSLMPGECLGIIGPSGSGKSLLGQVIAGLSMPTHGRVVLDNTDVSLFREGLKGDR 456 Query: 421 LGYLPQDIDLLGDTISDIIARLDDADRRKVVEAAKLVGIHEAIMRLPNGYDTVIHREKSF 480 LGYLPQDI+LLGDTI+DIIARLDDADRRKV+EAAKLVGIH AIMRLP GYDTV+ E +F Sbjct: 457 LGYLPQDINLLGDTINDIIARLDDADRRKVIEAAKLVGIHGAIMRLPLGYDTVVQSEATF 516 Query: 481 SRGYRQRLGLARAFFGGPRLIVLDEPNASLDYGGERMLLDAIERMKLAGVILVVVTHRMG 540 SRGYRQRLGLARAFFG PRLIVLDEPNASLDYGGERMLLDAIERMKLAGVILVV+THRMG Sbjct: 517 SRGYRQRLGLARAFFGSPRLIVLDEPNASLDYGGERMLLDAIERMKLAGVILVVITHRMG 576 Query: 541 LLAATDKIAIMEEGAVVAFGDSEEIFERHLNRPQVTSRIVP 581 LLAATDKIAIME+GAV AFGDSE+IFERHL+RPQVTS+I P Sbjct: 577 LLAATDKIAIMEDGAVAAFGDSEDIFERHLSRPQVTSQIAP 617 >ref|YP_002974126.1| type I secretion system ATPase [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS54587.1| type I secretion system ATPase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 571 Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust. Identities = 297/563 (52%), Positives = 375/563 (66%), Gaps = 3/563 (0%) Query: 15 PQIATPLHAALWCCAGPLGLVFAYSCSYNLLLFAPSIYLLQIYDRVLSSRSGDTLLLLTL 74 P+ T L AL CAG GLVF YSC YNL L APSIYLLQIYDRVLSSRS DTLL+LT+ Sbjct: 9 PRPPTQLVVALRACAGAFGLVFLYSCGYNLFLLAPSIYLLQIYDRVLSSRSADTLLMLTM 68 Query: 75 IVAITVVVGGVFDALRRAVLGRLGAWLDDRLRPCVLSASLESAFRGDWTRASDAYRDLTV 134 I+AI V+VG D +RRA L R+G+WLD RLRP VL+AS E A R D A++ YRDL Sbjct: 69 IIAIGVMVGSTLDIVRRAALSRIGSWLDHRLRPMVLTASFEYAARADTGAATECYRDLAA 128 Query: 135 LRQFIDSGACPMLFDALWAPLFLLVLFLIHPLLGVVGACCVAFLFALTVAGDLVTEDVLL 194 LRQF+DS A + FD WAP+FL +LFL+HPLLG +G L +L T + L Sbjct: 129 LRQFLDSPASSLFFDVPWAPVFLFLLFLVHPLLGTIGLLSALALLLFAFLTELATREPLA 188 Query: 195 RSGAALSRSYGRLQAAAGNIHMIRAMGMLDSAARTIYHDAQEARREHDVAVRRSEIVMLV 254 + ALSRSY R A NI +IRAMGM D AA +Y DA+ ARR D+A+ R+EI++ Sbjct: 189 YANLALSRSYIRFATALKNIEVIRAMGMQDGAALIVYRDAEMARRAQDIAMHRTEIILGF 248 Query: 255 TKPVRALSQVLIMGAAAWLVLDHGKSPAIIFASTLMFSRALAPVESAIAGWKSLRTAVSA 314 +K +R L+Q+L+MG+A WLVL + S IIF ++L+ R LAP+E AI W+S A +A Sbjct: 249 SKSIRTLAQILMMGSATWLVLANNGSAGIIFVASLLLGRGLAPIEGAIGAWRSFTFARNA 308 Query: 315 CQRLGAVLVASPAAGQQDPEVSQRQASSGLVVDNVGVRLSGTNHLLLNGVSFTLASGECL 374 RL +L++ A + D + +GLV+DNV + +L G++ LA G+C+ Sbjct: 309 FNRLNRMLIS--VASEHDARMVPLPEPNGLVLDNVSYIKPFADRPILTGITLRLAPGDCI 366 Query: 375 GIIGASGSGKSLLGRVIAGLSTPTDGCVLLDNTDVSLLREGLGGHRLGYLPQDIDLLGDT 434 +IG SGSGKS LGRVIAG+ T GC LL D+S LR G +GYLPQDI+L G Sbjct: 367 ALIGPSGSGKSTLGRVIAGVVQATSGCALLGGVDISALRLCGGTRHVGYLPQDIELFGGA 426 Query: 435 ISDIIARLDDADRRKVVEAAKLVGIHEAIMRLPNGYDTVIHREKS-FSRGYRQRLGLARA 493 I D+I RLD D K ++AAKLVG+H+AIMRLP GY+T I + R RQ+LGLARA Sbjct: 427 IKDVIGRLDGGDPGKAIDAAKLVGLHDAIMRLPQGYETDIGEGGNLLLRAQRQQLGLARA 486 Query: 494 FFGGPRLIVLDEPNASLDYGGERMLLDAIERMKLAGVILVVVTHRMGLLAATDKIAIMEE 553 +G P LIVLD+PN+SLDY GERML AIERMK G+ +V++THRMG+L T+KIAIM Sbjct: 487 AYGNPSLIVLDDPNSSLDYDGERMLFTAIERMKSRGMTVVIMTHRMGILPVTNKIAIMRN 546 Query: 554 GAVVAFGDSEEIFERHLNRPQVT 576 G V AFGDSE I+E +L P T Sbjct: 547 GTVAAFGDSERIYETYLQPPSRT 569 >ref|YP_001372508.1| type I secretion system ATPase [Ochrobactrum anthropi ATCC 49188] gb|ABS16679.1| type I secretion system ATPase [Ochrobactrum anthropi ATCC 49188] Length = 572 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 297/559 (53%), Positives = 382/559 (68%), Gaps = 2/559 (0%) Query: 19 TPLHAALWCCAGPLGLVFAYSCSYNLLLFAPSIYLLQIYDRVLSSRSGDTLLLLTLIVAI 78 TPL AAL CAG GLVFAYSC YN+ L APS+YLLQIYDRVLSSRS DTLL+LT+I+AI Sbjct: 13 TPLVAALRRCAGAFGLVFAYSCGYNIFLLAPSLYLLQIYDRVLSSRSVDTLLMLTIIIAI 72 Query: 79 TVVVGGVFDALRRAVLGRLGAWLDDRLRPCVLSASLESAFRGDWTRASDAYRDLTVLRQF 138 V+VG + D +RRA L R+G+WLD +LRP V++AS E A R D A++ YRDL+VLRQF Sbjct: 73 AVIVGSLLDIVRRAALSRIGSWLDRQLRPVVMNASFEYAARTDAGTAAENYRDLSVLRQF 132 Query: 139 IDSGACPMLFDALWAPLFLLVLFLIHPLLGVVGACCVAFLFALTVAGDLVTEDVLLRSGA 198 +DS +C +LFD WAP+FL++LFL+HPLLG +G L L + + T ++ ++ Sbjct: 133 LDSPSCALLFDIPWAPVFLVLLFLVHPLLGFIGLSSALCLLLLALLNEFTTRELNEQANI 192 Query: 199 ALSRSYGRLQAAAGNIHMIRAMGMLDSAARTIYHDAQEARREHDVAVRRSEIVMLVTKPV 258 A +RSY R A I +IRAMGM AA IY DA+ R D RR+E++ +K V Sbjct: 193 AQARSYSRFTMALKYIGVIRAMGMQHGAAHLIYRDAEAVRAAQDGVARRTEVLQAFSKSV 252 Query: 259 RALSQVLIMGAAAWLVLDHGKSPAIIFASTLMFSRALAPVESAIAGWKSLRTAVSACQRL 318 RAL+Q+L+MGAA WLVL + +P IIF ++L+ R LAPVE AI W++L A RL Sbjct: 253 RALTQILMMGAATWLVLQNNSNPGIIFVASLLLGRGLAPVEGAIGAWRALAFVRGAFNRL 312 Query: 319 GAVLVASPAAGQQDPEVSQRQASSGLVVDNVGVRLSGTNHLLLNGVSFTLASGECLGIIG 378 +L A G + + LV+DNVG R ++ +L GVSF +A G+C+ +IG Sbjct: 313 NKMLTLV-APGDNKRTILLPEPKGQLVLDNVGYRFPSSDRFILRGVSFQVAPGDCVALIG 371 Query: 379 ASGSGKSLLGRVIAGLSTPTDGCVLLDNTDVSLLREGLGGHRLGYLPQDIDLLGDTISDI 438 SGSGKS LGR++AG+S PT GC LL D+SLLR +GYLPQDI+L G I D+ Sbjct: 372 PSGSGKSTLGRILAGVSRPTCGCALLGGIDISLLRHCDNARHIGYLPQDIELFGGAIKDV 431 Query: 439 IARLDDADRRKVVEAAKLVGIHEAIMRLPNGYDTVIHREKS-FSRGYRQRLGLARAFFGG 497 I RLD +D RKV+EAAKLVG+HE IMRLP GY+T I + R RQ+LGLARA +G Sbjct: 432 IGRLDGSDPRKVIEAAKLVGLHETIMRLPQGYETDIGEGGALLLRAQRQQLGLARAAYGN 491 Query: 498 PRLIVLDEPNASLDYGGERMLLDAIERMKLAGVILVVVTHRMGLLAATDKIAIMEEGAVV 557 P L+VLD+PN+SLDY GER+L DAIERMK + +V++THRMG+L TDKIA+M +G V Sbjct: 492 PPLVVLDDPNSSLDYEGERLLFDAIERMKCRQITIVIITHRMGILPVTDKIAVMRDGMVS 551 Query: 558 AFGDSEEIFERHLNRPQVT 576 AFGDSE+IF+ L P T Sbjct: 552 AFGDSEKIFDAFLRVPAKT 570 >ref|YP_001976835.1| protein ABC transporter protein [Rhizobium etli CIAT 652] gb|ACE89657.1| putative protein ABC transporter protein [Rhizobium etli CIAT 652] Length = 571 Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust. Identities = 301/564 (53%), Positives = 380/564 (67%), Gaps = 5/564 (0%) Query: 12 PVLPQIATPLHAALWCCAGPLGLVFAYSCSYNLLLFAPSIYLLQIYDRVLSSRSGDTLLL 71 P PQ T L AL CAG GLVF YSC YNL L APSIYLLQIYDRVLSSRS DTL++ Sbjct: 8 PARPQ--THLVLALRACAGAFGLVFLYSCGYNLFLLAPSIYLLQIYDRVLSSRSADTLVM 65 Query: 72 LTLIVAITVVVGGVFDALRRAVLGRLGAWLDDRLRPCVLSASLESAFRGDWTRASDAYRD 131 LTLI+AI V+VG + D +RRA L R+G+W+D RLRP VL+AS E A R D A+D YRD Sbjct: 66 LTLIIAIAVLVGSMLDIVRRAALSRVGSWVDHRLRPMVLTASFEYAARVDAGAATDCYRD 125 Query: 132 LTVLRQFIDSGACPMLFDALWAPLFLLVLFLIHPLLGVVGACCVAFLFALTVAGDLVTED 191 L LRQF+DS A + FD WAP+FLL+LFL+HPLLG +G L +L T + Sbjct: 126 LAALRQFLDSPASSLFFDVPWAPVFLLLLFLVHPLLGAIGLLSAVALLLFAFLTELATRE 185 Query: 192 VLLRSGAALSRSYGRLQAAAGNIHMIRAMGMLDSAARTIYHDAQEARREHDVAVRRSEIV 251 L + AALSRSY R A NI +IR MGM D AA +Y DA+ ARR D+A+ R+EI+ Sbjct: 186 PLAHANAALSRSYFRFATALKNIEVIRVMGMQDGAAMIVYRDAEMARRAQDIAMHRTEII 245 Query: 252 MLVTKPVRALSQVLIMGAAAWLVLDHGKSPAIIFASTLMFSRALAPVESAIAGWKSLRTA 311 + +K +R L+Q+L+MG+A WLVL + SP IIF ++L+ R LAP+E AI W+S A Sbjct: 246 LGFSKSIRTLAQILMMGSATWLVLANSGSPGIIFVASLLLGRGLAPIEGAIGAWRSFTFA 305 Query: 312 VSACQRLGAVLVASPAAGQQDPEVSQRQASSGLVVDNVGVRLSGTNHLLLNGVSFTLASG 371 +A RL +L+ A +QD + +GLV++NV + + +L G++ LA G Sbjct: 306 RNAFNRLNRMLIT--VASEQDGRIVPFPEPNGLVLENVSYVMPFADRPILTGITLRLAPG 363 Query: 372 ECLGIIGASGSGKSLLGRVIAGLSTPTDGCVLLDNTDVSLLREGLGGHRLGYLPQDIDLL 431 +C+ +IG SGSGKS LGRV+AG+ T GC LL D+S LR G +GYLPQDI+L Sbjct: 364 DCIALIGPSGSGKSTLGRVMAGVVPATSGCALLGGVDISALRLCGGTRHVGYLPQDIELF 423 Query: 432 GDTISDIIARLDDADRRKVVEAAKLVGIHEAIMRLPNGYDTVIHREKS-FSRGYRQRLGL 490 G I D+I RLD D K +EAAKLVG+H+AIMRLP+GY+T I S R RQ+LGL Sbjct: 424 GGAIKDVIGRLDGEDPGKAIEAAKLVGLHDAIMRLPHGYETDIGENGSLLLRAQRQQLGL 483 Query: 491 ARAFFGGPRLIVLDEPNASLDYGGERMLLDAIERMKLAGVILVVVTHRMGLLAATDKIAI 550 ARA +G P LIVLD+PN+SLDY GERML AIERMK + +V++THRMG+L T+KIAI Sbjct: 484 ARAAYGNPSLIVLDDPNSSLDYDGERMLFAAIERMKARRMTVVIITHRMGILPVTNKIAI 543 Query: 551 MEEGAVVAFGDSEEIFERHLNRPQ 574 M G VVAFGDSE I+E +L P Sbjct: 544 MRNGTVVAFGDSERIYETYLQPPS 567 >gb|EGE58623.1| putative protein ABC transporter protein [Rhizobium etli CNPAF512] Length = 617 Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust. Identities = 298/566 (52%), Positives = 380/566 (67%), Gaps = 5/566 (0%) Query: 12 PVLPQIATPLHAALWCCAGPLGLVFAYSCSYNLLLFAPSIYLLQIYDRVLSSRSGDTLLL 71 P PQ T L AL CAG GLVF YSC YNL L APSIYLLQIYDRVLSSRS DTL++ Sbjct: 54 PARPQ--THLVLALRACAGAFGLVFLYSCGYNLFLLAPSIYLLQIYDRVLSSRSADTLVM 111 Query: 72 LTLIVAITVVVGGVFDALRRAVLGRLGAWLDDRLRPCVLSASLESAFRGDWTRASDAYRD 131 LTLI+AI V+VG + D +RRA L R+G+W+D RLRP VL+AS E A R D A++ YRD Sbjct: 112 LTLIIAIAVLVGSMLDIVRRAALSRVGSWVDHRLRPMVLTASFEYAARVDAGTATECYRD 171 Query: 132 LTVLRQFIDSGACPMLFDALWAPLFLLVLFLIHPLLGVVGACCVAFLFALTVAGDLVTED 191 L LRQF+DS A + FD WAP+FLL+LFL+HPLLG +G L +L T + Sbjct: 172 LAALRQFLDSPASSLFFDVPWAPVFLLLLFLVHPLLGTIGLLSAVALLLFAFLTELATRE 231 Query: 192 VLLRSGAALSRSYGRLQAAAGNIHMIRAMGMLDSAARTIYHDAQEARREHDVAVRRSEIV 251 L + AALSRSY R A NI +IRAMGM D AA +Y DA+ ARR D+A+ R+EI+ Sbjct: 232 PLAHANAALSRSYFRFATALKNIEVIRAMGMQDGAAMIVYRDAEMARRAQDIAMHRTEII 291 Query: 252 MLVTKPVRALSQVLIMGAAAWLVLDHGKSPAIIFASTLMFSRALAPVESAIAGWKSLRTA 311 + +K +R L+Q+L+MG+A WLVL + SP IIF ++L+ R LAP+E AI W+S A Sbjct: 292 LGFSKSIRTLAQILMMGSATWLVLANSGSPGIIFVASLLLGRGLAPIEGAIGAWRSFTFA 351 Query: 312 VSACQRLGAVLVASPAAGQQDPEVSQRQASSGLVVDNVGVRLSGTNHLLLNGVSFTLASG 371 +A RL +L+ A +QD + +GLV++NV + + +L ++ LA G Sbjct: 352 RNAFNRLNRMLIT--VASEQDGRIVPFPEPNGLVLENVSYVMPFADRPILTDITLRLAPG 409 Query: 372 ECLGIIGASGSGKSLLGRVIAGLSTPTDGCVLLDNTDVSLLREGLGGHRLGYLPQDIDLL 431 +C+ +IG SGSGKS LGRV+AG+ T GC LL D+S LR G +GYLPQDI+L Sbjct: 410 DCIALIGPSGSGKSTLGRVMAGVVPATSGCALLGGVDISALRLCGGARHVGYLPQDIELF 469 Query: 432 GDTISDIIARLDDADRRKVVEAAKLVGIHEAIMRLPNGYDTVIHREKS-FSRGYRQRLGL 490 G I D+I RLD D K ++AAKLVG+H+AIMRLP GY+T I S R RQ+LGL Sbjct: 470 GGAIKDVIGRLDGEDPGKAIDAAKLVGLHDAIMRLPQGYETDIGENGSLLLRAQRQQLGL 529 Query: 491 ARAFFGGPRLIVLDEPNASLDYGGERMLLDAIERMKLAGVILVVVTHRMGLLAATDKIAI 550 ARA +G P LIVLD+PN+SLDY GERML AIERM+ + +V++THRMG+L T+KIAI Sbjct: 530 ARAAYGNPSLIVLDDPNSSLDYDGERMLFAAIERMRARRMTVVIITHRMGILPVTNKIAI 589 Query: 551 MEEGAVVAFGDSEEIFERHLNRPQVT 576 M G V AFGDSE+I+E +L P T Sbjct: 590 MRNGTVAAFGDSEQIYETYLQPPSRT 615