BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0259.0002.p (228 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1862 [P] COG4149 ABC-type molybdate transport system, permease... 206 5e-53 CC0329 Non COG 163 2e-40 Cj0301c [P] COG4149 ABC-type molybdate transport system, permeas... 133 3e-31 jhp0426 [P] COG4149 ABC-type molybdate transport system, permeas... 115 5e-26 HP0474 [P] COG4149 ABC-type molybdate transport system, permease... 115 9e-26 >PA1862 [P] COG4149 ABC-type molybdate transport system, permease component Pae Pseudomonas aeruginosa Length = 228 Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 115/214 (53%), Positives = 154/214 (71%), Gaps = 2/214 (0%) Query: 14 LTVELASVTTMILLVIGAPLAWWLARSKTVLSEAVATMVALPLVLPPTALGFCVLVLLGP 73 LT+ELAS+TT++LL+IG P+AWWLAR+++ L + +VALPLVLPPT +GF +LV +GP Sbjct: 15 LTIELASLTTLLLLLIGTPIAWWLARTRSWLKGPIGAVVALPLVLPPTVIGFYLLVSMGP 74 Query: 74 NGPGGLLASFWGEHTLAFTFAGIVVGSVLSALPLVVQPIRSAFVAMGNHPQEVVASQRVS 133 NG G L G TL FTFAG+VVGSV +LP VVQP+++AF A+G P E A+ R S Sbjct: 75 NGFIGQLTQSLGLGTLPFTFAGLVVGSVFYSLPFVVQPLQNAFEAIGEKPLEAAATLRAS 134 Query: 134 ALFAFITVGLPLARLEFLKAGLVGFAHTIGTFGVVMMIGGNIPGRTKVLSAYVIDYVQAS 193 + F +V LPLAR F+ A ++GFAHT+G FGVV+MIGGNIP +T+V+S + D+V+A Sbjct: 135 PVDRFFSVVLPLARPGFVTAAILGFAHTVGEFGVVLMIGGNIPEKTRVVSVQIFDHVEAM 194 Query: 194 RWREAGWVAGGMVMFAFAVMFTLTLIDKRCARRG 227 + +A W+AGGMV F+F V+ L L R R G Sbjct: 195 EYAQAHWLAGGMVAFSFVVL--LALYSGRRRRPG 226 >CC0329 Non COG Length = 224 Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 95/185 (51%), Positives = 127/185 (68%) Query: 14 LTVELASVTTMILLVIGAPLAWWLARSKTVLSEAVATMVALPLVLPPTALGFCVLVLLGP 73 LT +LA +TT++LL++ PL+WWLAR ++ L V +VALP+VLPPT LGF +L+ LGP Sbjct: 7 LTAKLAGITTLLLLLLATPLSWWLARGRSPLRTPVTAIVALPIVLPPTVLGFYLLIALGP 66 Query: 74 NGPGGLLASFWGEHTLAFTFAGIVVGSVLSALPLVVQPIRSAFVAMGNHPQEVVASQRVS 133 N P L +G TLAFTF G+V+GS++ +LP VQP+R+AF+A+G+ P E AS S Sbjct: 67 NSPLMALLQPFGVRTLAFTFEGLVIGSLIYSLPFAVQPLRNAFLAIGDEPLEAAASLGAS 126 Query: 134 ALFAFITVGLPLARLEFLKAGLVGFAHTIGTFGVVMMIGGNIPGRTKVLSAYVIDYVQAS 193 F V LPLA ++ A ++ FAHT+G FGVVMM+GGNIPG T VLS + V+A Sbjct: 127 RAETFWRVALPLALPGYVAAAILTFAHTVGEFGVVMMLGGNIPGETTVLSTEIYRLVEAL 186 Query: 194 RWREA 198 W EA Sbjct: 187 EWGEA 191 >Cj0301c [P] COG4149 ABC-type molybdate transport system, permease component Cje Campylobacter jejuni Length = 224 Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 76/223 (34%), Positives = 125/223 (56%) Query: 4 LSPEIWQSVALTVELASVTTMILLVIGAPLAWWLARSKTVLSEAVATMVALPLVLPPTAL 63 L P Q++ LT +LA +TT IL IG LA+ L+ + + + ++LPL+LPP+ L Sbjct: 2 LDPAFLQTLYLTFKLAFITTFILFFIGVFLAYLLSFVRFPFKTILQSFISLPLILPPSVL 61 Query: 64 GFCVLVLLGPNGPGGLLASFWGEHTLAFTFAGIVVGSVLSALPLVVQPIRSAFVAMGNHP 123 GF +LV N G + + +L F+F G+V S++ +LP +V P++SAF ++ + Sbjct: 62 GFYLLVTFSANSFLGQVLKEYFNLSLVFSFEGLVFASLIFSLPFMVNPLQSAFSSINPNL 121 Query: 124 QEVVASQRVSALFAFITVGLPLARLEFLKAGLVGFAHTIGTFGVVMMIGGNIPGRTKVLS 183 + S S ++ V LP ++ A + FAHT+G FGVVMMIGG+ G T V S Sbjct: 122 LDASYSLGKSKIYTLFRVILPNSKAGIFSACAMSFAHTVGEFGVVMMIGGHKQGETLVAS 181 Query: 184 AYVIDYVQASRWREAGWVAGGMVMFAFAVMFTLTLIDKRCARR 226 + D ++ + A A + +F+F V+F+L I+K+ + + Sbjct: 182 IAIYDELEILNYSLAHQYAFILFIFSFLVLFSLYFINKKMSFQ 224 >jhp0426 [P] COG4149 ABC-type molybdate transport system, permease component jHp Helicobacter pylori J99 Length = 224 Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 64/196 (32%), Positives = 110/196 (56%) Query: 29 IGAPLAWWLARSKTVLSEAVATMVALPLVLPPTALGFCVLVLLGPNGPGGLLASFWGEHT 88 IG L ++L+ + +L+ T+V +PLVLPP+ LGF +L++ P+ G Sbjct: 26 IGIFLGYFLSLKRNLLTSLTETLVYMPLVLPPSVLGFYLLLIFSPSSFLGAFLQDVLNVK 85 Query: 89 LAFTFAGIVVGSVLSALPLVVQPIRSAFVAMGNHPQEVVASQRVSALFAFITVGLPLARL 148 L F+F G+++GSV+ +LP +V PI+SA +++ +E S + V LP + Sbjct: 86 LVFSFQGLILGSVIFSLPFMVSPIKSALISLPTSLKEASYSLGKGEYYTLFFVLLPNIKP 145 Query: 149 EFLKAGLVGFAHTIGTFGVVMMIGGNIPGRTKVLSAYVIDYVQASRWREAGWVAGGMVMF 208 L A + F HTIG FGVVMM+GG+I G T+V S + + +A + +A A + + Sbjct: 146 SVLMAIITTFMHTIGEFGVVMMLGGDILGETRVASITIFNEAEALNYSKAHQYALTLTLI 205 Query: 209 AFAVMFTLTLIDKRCA 224 +F+++F ++K+ + Sbjct: 206 SFSLLFVTLFLNKKQS 221 >HP0474 [P] COG4149 ABC-type molybdate transport system, permease component Hpy Helicobacter pylori 26695 Length = 224 Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 63/196 (32%), Positives = 110/196 (56%) Query: 29 IGAPLAWWLARSKTVLSEAVATMVALPLVLPPTALGFCVLVLLGPNGPGGLLASFWGEHT 88 +G L ++L+ + +L+ T+V +PLVLPP+ LGF +L++ P+ G Sbjct: 26 VGIFLGYFLSLKRNLLTSLTETLVYMPLVLPPSVLGFYLLLIFSPSSFLGAFLQDVLNVK 85 Query: 89 LAFTFAGIVVGSVLSALPLVVQPIRSAFVAMGNHPQEVVASQRVSALFAFITVGLPLARL 148 L F+F G+++GSV+ +LP +V PI+SA +++ +E S + V LP + Sbjct: 86 LVFSFQGLILGSVIFSLPFMVSPIKSALISLPASLKEASYSLGKGEYYTLFFVLLPNIKP 145 Query: 149 EFLKAGLVGFAHTIGTFGVVMMIGGNIPGRTKVLSAYVIDYVQASRWREAGWVAGGMVMF 208 L A + F HTIG FGVVMM+GG+I G T+V S + + +A + +A A + + Sbjct: 146 SLLMAIITTFTHTIGEFGVVMMLGGDILGETRVASIAIFNEAEALNYSKAHQYALTLTLI 205 Query: 209 AFAVMFTLTLIDKRCA 224 +F+++F ++K+ + Sbjct: 206 SFSLLFVTLFLNKKQS 221