BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0258.0032.p (232 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CC2312 Non COG 298 1e-80 SMc02902 [K] COG2378 Predicted transcriptional regulator Sme Sin... 186 5e-47 AGc1585 [K] COG2378 Predicted transcriptional regulator Atu Agro... 182 4e-46 mll3208 [K] COG2378 Predicted transcriptional regulator Mlo Meso... 182 7e-46 SMc00107 [K] COG2378 Predicted transcriptional regulator Sme Sin... 171 1e-42 >CC2312 Non COG Length = 261 Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 146/222 (65%), Positives = 180/222 (81%) Query: 1 MRRADRLFQIIQVLRRTRKPLTADAIAAELETSKRTIYRDIASLIEQRVPIRGEAGMGYI 60 MRRA+RLFQIIQ+LRR+R P+TADAIAAELETSKR++YRDIA+L+ QR PIRGEAG+GY+ Sbjct: 23 MRRAERLFQIIQILRRSRAPVTADAIAAELETSKRSVYRDIAALVGQRAPIRGEAGVGYV 82 Query: 61 LEKGFDLPPLMLTPDEIEACVLGAQWVVGHADPALARAAEDLMAKIAETVPDRLRPFVLE 120 L+ GFD+PPLMLTPDEIEA VLGAQWV G DP LA+AA DL++KIA VPDRLRP+VLE Sbjct: 83 LDAGFDMPPLMLTPDEIEAAVLGAQWVAGRGDPVLAKAARDLISKIAAAVPDRLRPYVLE 142 Query: 121 PASRARSAWNREPDRIDMVRTRSQIHEGKKITLNYRDEHGRDSERTIWPIAVGYHEAVRL 180 PA+ A AW + D+ID+ + R+ IH G+KI LNY DE G S+R IWP+ VGY E +R+ Sbjct: 143 PAAAAAPAWKPQTDKIDVAQVRAWIHAGRKIRLNYSDEAGAISDRVIWPVTVGYRETIRM 202 Query: 181 LAAWCELRRDFRSFRTDRVVTAVYHDEKYPERRDLLRARWRR 222 + AWCELR FR+FRTDRVV A + DE++ +R +LRA W R Sbjct: 203 IIAWCELRGAFRTFRTDRVVGAEFMDERHGKRPAVLRAEWLR 244 >SMc02902 [K] COG2378 Predicted transcriptional regulator Sme Sinorhizobium meliloti Length = 230 Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 105/221 (47%), Positives = 138/221 (62%), Gaps = 1/221 (0%) Query: 1 MRRADRLFQIIQVLRRTRKPLTADAIAAELETSKRTIYRDIASLIEQRVPIRGEAGMGYI 60 M R++RL ++QVLRR R+P++ +A E S RT+YRDIASL + I GE G+GY+ Sbjct: 1 MSRSERLLDLMQVLRRYRQPVSGRRLAEETGVSLRTLYRDIASLQARGARIEGEPGIGYV 60 Query: 61 LEKGFDLPPLMLTPDEIEACVLGAQWVVGHADPALARAAEDLMAKIAETVPDRLRPFVLE 120 L GF LPP+M + +EIEA VLG++WV DP LA AA D +AKI +P L+ LE Sbjct: 61 LRPGFMLPPMMFSEEEIEALVLGSRWVAKRGDPRLAAAAADALAKIGSVLPADLKE-KLE 119 Query: 121 PASRARSAWNREPDRIDMVRTRSQIHEGKKITLNYRDEHGRDSERTIWPIAVGYHEAVRL 180 ++ + ID+ R I K+ L Y D GRDS RT+WP A+G+ E VR+ Sbjct: 120 HSTLLVGPRKPGGETIDLSLLRKSIRSEHKLELRYLDNDGRDSRRTVWPFALGFFEEVRV 179 Query: 181 LAAWCELRRDFRSFRTDRVVTAVYHDEKYPERRDLLRARWR 221 LAAWCELR+DFR FRTDR+ A D++YP RR L WR Sbjct: 180 LAAWCELRQDFRHFRTDRIAEAAMLDDRYPRRRQALLKDWR 220 >AGc1585 [K] COG2378 Predicted transcriptional regulator Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 253 Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 99/219 (45%), Positives = 130/219 (59%) Query: 3 RADRLFQIIQVLRRTRKPLTADAIAAELETSKRTIYRDIASLIEQRVPIRGEAGMGYILE 62 R+ RL ++Q+LR R P++ A+AAE S RT+YRDIA+L Q I GEAG+GY+L Sbjct: 21 RSQRLLDLLQILRSHRMPVSGAALAAETGVSLRTLYRDIATLQAQGADIEGEAGVGYVLR 80 Query: 63 KGFDLPPLMLTPDEIEACVLGAQWVVGHADPALARAAEDLMAKIAETVPDRLRPFVLEPA 122 GF LPPLM + EIEA VLG++WV G AD LA AA + KIA +PD LR + Sbjct: 81 PGFLLPPLMFSQQEIEALVLGSRWVAGRADAGLAEAARAALVKIAAVLPDALREELDNST 140 Query: 123 SRARSAWNREPDRIDMVRTRSQIHEGKKITLNYRDEHGRDSERTIWPIAVGYHEAVRLLA 182 R+D+ R I + K + YRDE G +ER IWP A+ + + VR++ Sbjct: 141 LLVGPGQGLAAIRVDLAAIRETIRKESKAVMTYRDEKGDLTERVIWPFALAFFDLVRVVL 200 Query: 183 AWCELRRDFRSFRTDRVVTAVYHDEKYPERRDLLRARWR 221 AWCE R+DFRSFR DR+ + D +YP RR L WR Sbjct: 201 AWCETRQDFRSFRADRIESFRPLDNRYPRRRQALMKEWR 239 >mll3208 [K] COG2378 Predicted transcriptional regulator Mlo Mesorhizobium loti Length = 229 Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 102/224 (45%), Positives = 140/224 (62%), Gaps = 1/224 (0%) Query: 1 MRRADRLFQIIQVLRRTRKPLTADAIAAELETSKRTIYRDIASLIEQRVPIRGEAGMGYI 60 M R++RL +IQ LRR R+P++ A+A EL S RT+YRDIA+L Q PI GEAG+GY+ Sbjct: 1 MSRSERLLDLIQCLRRHRRPVSGQALADELGISIRTLYRDIATLQGQGAPIEGEAGLGYV 60 Query: 61 LEKGFDLPPLMLTPDEIEACVLGAQWVVGHADPALARAAEDLMAKIAETVPDRLRPFVLE 120 L+ GF LPPLM T +EIEA VLG++WV D L+ AA + +AKIA +PD LR L+ Sbjct: 61 LKPGFILPPLMFTDEEIEAIVLGSRWVAKQPDQRLSAAAANALAKIAAVLPDDLRE-DLD 119 Query: 121 PASRARSAWNREPDRIDMVRTRSQIHEGKKITLNYRDEHGRDSERTIWPIAVGYHEAVRL 180 ++ + ID+ R I +K+ YRD G S+R +WP A+G+ + VR+ Sbjct: 120 ASTLLVGPPAHAIEGIDLGVVRQAIRNERKLGFLYRDAGGAASQRVVWPFALGFFDKVRV 179 Query: 181 LAAWCELRRDFRSFRTDRVVTAVYHDEKYPERRDLLRARWRRSL 224 + AWCE+R+DFR FR DR+ D +YP RR L WR +L Sbjct: 180 VVAWCEMRQDFRHFRADRISALNAIDARYPRRRQALLKEWRATL 223 >SMc00107 [K] COG2378 Predicted transcriptional regulator Sme Sinorhizobium meliloti Length = 237 Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 99/220 (45%), Positives = 128/220 (58%) Query: 1 MRRADRLFQIIQVLRRTRKPLTADAIAAELETSKRTIYRDIASLIEQRVPIRGEAGMGYI 60 MR+A RLF+IIQ+LR RKP+TA IA LE + R+IYRDIA+L RVPI GE G+GYI Sbjct: 1 MRKASRLFEIIQMLRLARKPVTAAEIADALEVTPRSIYRDIAALQAMRVPIEGERGIGYI 60 Query: 61 LEKGFDLPPLMLTPDEIEACVLGAQWVVGHADPALARAAEDLMAKIAETVPDRLRPFVLE 120 L GFDLPPLM + +E EA VL + D L AA + KI VP+ LR Sbjct: 61 LRPGFDLPPLMFSIEETEAIVLALALLARTGDEELKAAARRVNQKITGAVPEPLRKVFQS 120 Query: 121 PASRARSAWNREPDRIDMVRTRSQIHEGKKITLNYRDEHGRDSERTIWPIAVGYHEAVRL 180 A A P D+ R I + +K+ L+YRDE GR +ERT+ P+A+ Y+ + Sbjct: 121 QALHAWGTIASPPPAADLAMIRRAIRDEQKLVLDYRDELGRATERTVLPLALIYYSEHAM 180 Query: 181 LAAWCELRRDFRSFRTDRVVTAVYHDEKYPERRDLLRARW 220 + AWCELR+D R+FR DRV D + + LR W Sbjct: 181 MVAWCELRQDIRNFRADRVEHCEPADAYFRGEGNRLRQMW 220