BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0258.0002.p         (93 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC0779 [I] COG0183 Acetyl-CoA acetyltransferase Ccr Caulobacter ...   144   6e-35
Rv3556c [I] COG0183 Acetyl-CoA acetyltransferase Mtu Mycobacteri...    87   1e-17
MT3660 [I] COG0183 Acetyl-CoA acetyltransferase MtC Mycobacteriu...    87   1e-17
PA0228 [I] COG0183 Acetyl-CoA acetyltransferase Pae Pseudomonas ...    69   3e-12
CC0077 [I] COG0183 Acetyl-CoA acetyltransferase Ccr Caulobacter ...    69   4e-12

>CC0779 [I] COG0183 Acetyl-CoA acetyltransferase Ccr Caulobacter
          vibrioides
          Length = 390

 Score =  144 bits (362), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 70/94 (74%), Positives = 81/94 (86%), Gaps = 2/94 (2%)

Query: 1  MAEAYIVAAARTAGGRKGGRLAGWHPADLAATVLDALVERTGADPAQVEDVIMGCVMQTG 60
          M EAYIVAAARTAGGRKGGR++GWHPADLA  VL+ALV+R+GADPA +EDVIMGCV Q G
Sbjct: 1  MGEAYIVAAARTAGGRKGGRVSGWHPADLAGEVLNALVDRSGADPALIEDVIMGCVGQVG 60

Query: 61 EQSTNIARNAVMASKLPESVPXRS--RRCTSRRR 92
          EQ+ NIARNAV+ASKLPESVP  S  R+C S ++
Sbjct: 61 EQAINIARNAVLASKLPESVPATSVDRQCGSSQQ 94


>Rv3556c [I] COG0183 Acetyl-CoA acetyltransferase Mtu Mycobacterium
          tuberculosis H37Rv
          Length = 386

 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 2/94 (2%)

Query: 1  MAEAYIVAAARTAGGRKGGRLAGWHPADLAATVLDALVERTGADPAQVEDVIMGCVMQTG 60
          M EAY++ A RTA G++GG LAG HP DL A     L++RT  DPA V+DVI GCV   G
Sbjct: 1  MTEAYVIDAVRTAVGKRGGALAGIHPVDLGALAWRGLLDRTDIDPAAVDDVIAGCVDAIG 60

Query: 61 EQSTNIARNAVMASKLPESVPXRS--RRCTSRRR 92
           Q+ NIAR + +A+  PE VP  +  R+C S ++
Sbjct: 61 GQAGNIARLSWLAAGYPEEVPGVTVDRQCGSSQQ 94


>MT3660 [I] COG0183 Acetyl-CoA acetyltransferase MtC Mycobacterium
          tuberculosis CDC1551
          Length = 386

 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 2/94 (2%)

Query: 1  MAEAYIVAAARTAGGRKGGRLAGWHPADLAATVLDALVERTGADPAQVEDVIMGCVMQTG 60
          M EAY++ A RTA G++GG LAG HP DL A     L++RT  DPA V+DVI GCV   G
Sbjct: 1  MTEAYVIDAVRTAVGKRGGALAGIHPVDLGALAWRGLLDRTDIDPAAVDDVIAGCVDAIG 60

Query: 61 EQSTNIARNAVMASKLPESVPXRS--RRCTSRRR 92
           Q+ NIAR + +A+  PE VP  +  R+C S ++
Sbjct: 61 GQAGNIARLSWLAAGYPEEVPGVTVDRQCGSSQQ 94


>PA0228 [I] COG0183 Acetyl-CoA acetyltransferase Pae Pseudomonas
          aeruginosa
          Length = 401

 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 3/90 (3%)

Query: 3  EAYIVAAARTAGGRKGGRLAGWHPADLAATVLDALVERT-GADPAQVEDVIMGCVMQTGE 61
          E +I  A RT  GR GG L+     DLAA  L ALVER  G D + +++V +GC  Q GE
Sbjct: 4  EVFICDAVRTPIGRFGGSLSAVRADDLAAVPLKALVERNPGVDWSALDEVFLGCANQAGE 63

Query: 62 QSTNIARNAVMASKLPESVP--XRSRRCTS 89
           + N+AR A++ + LPESVP    +R C S
Sbjct: 64 DNRNVARMALLLAGLPESVPGVTLNRLCAS 93


>CC0077 [I] COG0183 Acetyl-CoA acetyltransferase Ccr Caulobacter
          vibrioides
          Length = 401

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 4/93 (4%)

Query: 1  MAEAYIVAAART--AGGRKGGRLAGWHPADLAATVLDALVERTGADPAQVEDVIMGCVMQ 58
          MA+AYI  A RT    G+K G L       LA  VL+AL +R G D ++V+DV++GCV  
Sbjct: 1  MADAYIFDAVRTPRGKGKKDGSLHETTALSLATQVLEALRDRNGLDTSKVDDVVLGCVSP 60

Query: 59 TGEQSTNIARNAVMASKLPESVP--XRSRRCTS 89
           GEQ ++IAR AV+ +   ESV     +R C S
Sbjct: 61 VGEQGSDIARTAVLTADYAESVAGVQINRFCAS 93