BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0257.0019.p (504 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc0793 [S] COG3333 Uncharacterized protein conserved in bacteri... 656 0.0 SMb20027 Non COG 628 e-179 AGc184 [S] COG3333 Uncharacterized protein conserved in bacteria... 597 e-170 AGpA475 [S] COG3333 Uncharacterized protein conserved in bacteri... 591 e-168 STM2788 [S] COG3333 Uncharacterized protein conserved in bacteri... 394 e-109 >RSc0793 [S] COG3333 Uncharacterized protein conserved in bacteria Rso Ralstonia solanacearum Length = 500 Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/502 (64%), Positives = 402/502 (80%), Gaps = 2/502 (0%) Query: 1 MELFANLAHGFAVAFSPINLLMCLIGALVGTLVGVLPGIGTIATVAMLLPITFGLPPVGA 60 M+L ANLA GF+ A S NL+ IG ++GTL+GVLPG+G IAT+AMLLP+T+ LPP A Sbjct: 1 MDLLANLALGFSTALSLQNLVYAFIGCVLGTLIGVLPGLGPIATIAMLLPVTYTLPPAAA 60 Query: 61 LIMLAGIYYGSMYGGSTTSILVNIPGEATSVVTALDGHQMAKQGRAGPALAIAAIGSFFA 120 LIMLAGIYYG+ YGGSTT+ILVN+PGE++SVVT +DG+QMA++GRAG ALA A +GSFFA Sbjct: 61 LIMLAGIYYGAQYGGSTTAILVNLPGESSSVVTTIDGYQMARRGRAGVALATAGLGSFFA 120 Query: 121 GCVATVLIAVLGAPLTKLALAFGPAEYFSLMVLGLIFAVVLAKGSVLKAIAMIVFGLLLS 180 GCVAT+++A PL++ A FGPAEYFSLMVLGLI AVVLA GS+LKAIAMIVFGLLL Sbjct: 121 GCVATLVLAAFATPLSEFAFRFGPAEYFSLMVLGLIGAVVLASGSLLKAIAMIVFGLLLG 180 Query: 181 MVGSDIETGASRMAFNIPELADGLGFATVAMGVFGFAEIIRNLDHGAEMNRNLVQQKITG 240 +VG+D+ +GA+R AF++PELADGL F +VAMGVFGFAEII NL+ + +R + Sbjct: 181 LVGTDVNSGAARYAFDVPELADGLNFVSVAMGVFGFAEIIINLEQ--KEHRETFVDHVRN 238 Query: 241 LMPTRKDIADSTPAILRGTVLGSILGILPGGGAVIASFAAYTLEKKLAKDPKRFGRGAIE 300 L P+R+D P++LRGT LGS+LGILPGGGA +ASFA+Y+LEKK ++ FG+GAIE Sbjct: 239 LWPSREDFRRMVPSVLRGTALGSLLGILPGGGATLASFASYSLEKKASRYAHEFGKGAIE 298 Query: 301 GVAAPESANNAAAQTSFIPLLTLGIPPNAVMALMVGAMTIHGIVPGPQVMQKQPDLVWGM 360 GVA PESANNAAAQTSFIPLLTLGIP NAVMALMV AMT+H I PGPQV+ P L WG+ Sbjct: 299 GVAGPESANNAAAQTSFIPLLTLGIPSNAVMALMVSAMTMHDIQPGPQVVTSNPALFWGL 358 Query: 361 IASMWIGNLMLIIINLPLVGIWVRLLRVPYRLMFPSIVVFCAIGIYSVNNAPVDVVLAGV 420 IASMWIGNLMLI++NLP++G+WVRLL+VPYR ++P+I+VFC IG+YSV+N DV V Sbjct: 359 IASMWIGNLMLIVLNLPMIGLWVRLLKVPYRFLYPAILVFCCIGVYSVSNTTFDVFQTAV 418 Query: 421 FGLVGYWLIKHDFEPAPLLLGKVLGPLMEENLRRALLISRGDWSVFVSRPLSAVLLAIAA 480 FGL+GY +K EPAP+LLG VLGPLMEEN RRA+ SRGD+S+FV+RPLS LL AA Sbjct: 419 FGLLGYLFVKLRCEPAPMLLGFVLGPLMEENFRRAMQFSRGDFSIFVTRPLSLGLLIGAA 478 Query: 481 GLLVLAVLPTLRAKRDEVFVES 502 L++L +P + KR++ F E Sbjct: 479 ALVLLVAMPAIGRKREQAFQEE 500 >SMb20027 Non COG Length = 501 Score = 628 bits (1619), Expect = e-179, Method: Compositional matrix adjust. Identities = 319/503 (63%), Positives = 405/503 (80%), Gaps = 2/503 (0%) Query: 1 MELFANLAHGFAVAFSPINLLMCLIGALVGTLVGVLPGIGTIATVAMLLPITFGLPPVGA 60 MELF+NLA GFA A SP NLL CLIG L+GTL+GVLPGIG AT+AMLLPITF L PV + Sbjct: 1 MELFSNLALGFATAASPANLLFCLIGVLLGTLIGVLPGIGATATIAMLLPITFQLEPVSS 60 Query: 61 LIMLAGIYYGSMYGGSTTSILVNIPGEATSVVTALDGHQMAKQGRAGPALAIAAIGSFFA 120 LIMLAGIYYG+ YGGSTT+IL+N+PGE++S VTA+DG+QMA++GRAG ALAIAA+GSFFA Sbjct: 61 LIMLAGIYYGAQYGGSTTAILINMPGESSSAVTAIDGYQMARKGRAGTALAIAALGSFFA 120 Query: 121 GCVATVLIAVLGAPLTKLALAFGPAEYFSLMVLGLIFAVVLAKGSVLKAIAMIVFGLLLS 180 G V+T L+A+ PLT++AL FG AEYFSLM++GL+ +V LA GSV+KA+AM+ GLLL Sbjct: 121 GTVSTFLVALFAPPLTEIALEFGAAEYFSLMIVGLVSSVALAHGSVIKALAMVALGLLLG 180 Query: 181 MVGSDIETGASRMAFNIPELADGLGFATVAMGVFGFAEIIRNLDHGAEMNRNLVQQKITG 240 +VG+DI TG R I E +DGL F +A+GVFG AEI+RNL+ +E R ++ K+T Sbjct: 181 LVGTDIYTGTPRFTLGIREYSDGLNFVALAVGVFGIAEILRNLE--SEKTREVLMAKVTD 238 Query: 241 LMPTRKDIADSTPAILRGTVLGSILGILPGGGAVIASFAAYTLEKKLAKDPKRFGRGAIE 300 LMPTR+D +LRGT +GS LG+LPGGGA++A+FA+YT+EK+L+ P+ FGRGA+ Sbjct: 239 LMPTREDFRQMVAPVLRGTAIGSALGVLPGGGAILAAFASYTVEKRLSDRPEEFGRGAVA 298 Query: 301 GVAAPESANNAAAQTSFIPLLTLGIPPNAVMALMVGAMTIHGIVPGPQVMQKQPDLVWGM 360 GVA PESANNA AQTSFIPLLTLGIP N VMALM+GAM I GIVPGP V +QP L WG+ Sbjct: 299 GVAGPESANNAGAQTSFIPLLTLGIPANPVMALMIGAMIIQGIVPGPNVAVEQPALFWGI 358 Query: 361 IASMWIGNLMLIIINLPLVGIWVRLLRVPYRLMFPSIVVFCAIGIYSVNNAPVDVVLAGV 420 IASMWIGNLML+++NLPL+G+WV+LL++PY ++FP I+ FC+IG+YSVN+ D+ Sbjct: 359 IASMWIGNLMLVVLNLPLIGLWVKLLKIPYFVLFPIIMAFCSIGVYSVNSNVYDLYAVAF 418 Query: 421 FGLVGYWLIKHDFEPAPLLLGKVLGPLMEENLRRALLISRGDWSVFVSRPLSAVLLAIAA 480 FGLVGY L+K EPAPLLLG VLGPL+EENLRRA+++SRGD + FV+RP+SA LL IA Sbjct: 419 FGLVGYLLLKLRCEPAPLLLGFVLGPLLEENLRRAMILSRGDPTTFVTRPISATLLLIAL 478 Query: 481 GLLVLAVLPTLRAKRDEVFVESE 503 +LV+ LP+++ KR++VFVE + Sbjct: 479 AVLVVVFLPSVKKKREQVFVEED 501 >AGc184 [S] COG3333 Uncharacterized protein conserved in bacteria Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 501 Score = 597 bits (1540), Expect = e-170, Method: Compositional matrix adjust. Identities = 313/503 (62%), Positives = 400/503 (79%), Gaps = 2/503 (0%) Query: 1 MELFANLAHGFAVAFSPINLLMCLIGALVGTLVGVLPGIGTIATVAMLLPITFGLPPVGA 60 M+L NLA GF A S NL CLIG L+GTL+GVLPGIG AT+AMLLPITF L PV + Sbjct: 1 MDLLNNLALGFVTASSLANLFFCLIGVLLGTLIGVLPGIGATATIAMLLPITFQLEPVSS 60 Query: 61 LIMLAGIYYGSMYGGSTTSILVNIPGEATSVVTALDGHQMAKQGRAGPALAIAAIGSFFA 120 LIMLAGIYYG+ YGGSTT+IL+N+PGE++S VTA+DG+QMA++G+AG ALAIAAIGSFFA Sbjct: 61 LIMLAGIYYGAQYGGSTTAILINMPGESSSAVTAIDGYQMARKGKAGAALAIAAIGSFFA 120 Query: 121 GCVATVLIAVLGAPLTKLALAFGPAEYFSLMVLGLIFAVVLAKGSVLKAIAMIVFGLLLS 180 G V+T L+A+ PLT +AL FG AEYFSLMV+GL+ ++ LA GS++KA+AM+V GLLL Sbjct: 121 GTVSTFLVAIFAPPLTAIALEFGAAEYFSLMVVGLVSSIALAHGSIVKALAMVVLGLLLG 180 Query: 181 MVGSDIETGASRMAFNIPELADGLGFATVAMGVFGFAEIIRNLDHGAEMNRNLVQQKITG 240 +VG+DI +G R I E ADGL F VA+GVFG AEI+RNL++ E R+++ K++ Sbjct: 181 LVGTDIYSGTPRFTLGIREYADGLNFVAVAVGVFGIAEILRNLEN--ERTRSVLIAKVSS 238 Query: 241 LMPTRKDIADSTPAILRGTVLGSILGILPGGGAVIASFAAYTLEKKLAKDPKRFGRGAIE 300 LMP+++D +LRGT +GS LGILPGGGA++A+FA+YT+EK+++K+P+ FG GA+ Sbjct: 239 LMPSKEDFKAMIGPVLRGTAIGSALGILPGGGAILAAFASYTVEKRVSKNPEEFGHGAVA 298 Query: 301 GVAAPESANNAAAQTSFIPLLTLGIPPNAVMALMVGAMTIHGIVPGPQVMQKQPDLVWGM 360 GVA PESANNA AQTSFIPLLTLGIP N VMALM+GAM I GIVPGP V +QP L WG+ Sbjct: 299 GVAGPESANNAGAQTSFIPLLTLGIPANPVMALMIGAMIIQGIVPGPNVATEQPALFWGI 358 Query: 361 IASMWIGNLMLIIINLPLVGIWVRLLRVPYRLMFPSIVVFCAIGIYSVNNAPVDVVLAGV 420 IASMWIGNLML+I+NLPL+G+WV+LL VPY ++FP I+ FCAIG+YSVN+ D+ Sbjct: 359 IASMWIGNLMLVILNLPLIGLWVKLLTVPYYVLFPIIMAFCAIGVYSVNSNVFDLYAVAF 418 Query: 421 FGLVGYWLIKHDFEPAPLLLGKVLGPLMEENLRRALLISRGDWSVFVSRPLSAVLLAIAA 480 FG +GY L+K EPAPLLLG VLGPL+EENLRRA+++SRGD + FV+RP+SA LL IA Sbjct: 419 FGFIGYVLVKLRCEPAPLLLGFVLGPLLEENLRRAMILSRGDPTTFVTRPISATLLFIAL 478 Query: 481 GLLVLAVLPTLRAKRDEVFVESE 503 +L++ LP+++ KR+EVFVE + Sbjct: 479 AVLIIVFLPSVKKKREEVFVEED 501 >AGpA475 [S] COG3333 Uncharacterized protein conserved in bacteria Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 502 Score = 591 bits (1523), Expect = e-168, Method: Compositional matrix adjust. Identities = 301/494 (60%), Positives = 387/494 (78%), Gaps = 2/494 (0%) Query: 10 GFAVAFSPINLLMCLIGALVGTLVGVLPGIGTIATVAMLLPITFGLPPVGALIMLAGIYY 69 GF+ A +P NL CL+GAL+GTL+GVLPGIG AT+A+LLPITF LPP+ LIML+GIYY Sbjct: 10 GFSEALTPTNLGFCLLGALLGTLIGVLPGIGPTATIAVLLPITFYLPPLAGLIMLSGIYY 69 Query: 70 GSMYGGSTTSILVNIPGEATSVVTALDGHQMAKQGRAGPALAIAAIGSFFAGCVATVLIA 129 G+ YGGSTT+ILVN+PGEA+SVVTA+DG++MA+QGRAG ALA+AA+GSFFAG VAT IA Sbjct: 70 GAQYGGSTTAILVNLPGEASSVVTAVDGYKMAQQGRAGSALAVAALGSFFAGTVATFGIA 129 Query: 130 VLGAPLTKLALAFGPAEYFSLMVLGLIFAVVLAKGSVLKAIAMIVFGLLLSMVGSDIETG 189 + G L+ AL+FGPAEY SLM+ GL+ A +LA+GSVLKAI MI+ GLLL MVG D +G Sbjct: 130 IAGPTLSSFALSFGPAEYVSLMLFGLLAATILARGSVLKAIGMILLGLLLGMVGIDASSG 189 Query: 190 ASRMAFNIPELADGLGFATVAMGVFGFAEIIRNLDHGAEMNRNLVQQKITGLMPTRKDIA 249 R+ FN EL DG+ F +A+G+FGF+EI+ NL++ R ++ K++ L PTR+D Sbjct: 190 EERLTFNAVELFDGIDFVVIAIGLFGFSEIVENLENVEA--RGVLVSKLSRLWPTREDFR 247 Query: 250 DSTPAILRGTVLGSILGILPGGGAVIASFAAYTLEKKLAKDPKRFGRGAIEGVAAPESAN 309 + PA+LRGT +G+ LG+LPGGGA +ASF AY++EKK++K P FG GA+EGVA PE+AN Sbjct: 248 RAWPAVLRGTGVGTFLGVLPGGGATLASFCAYSVEKKVSKRPNEFGEGAVEGVAGPEAAN 307 Query: 310 NAAAQTSFIPLLTLGIPPNAVMALMVGAMTIHGIVPGPQVMQKQPDLVWGMIASMWIGNL 369 NA AQ+SFIPLLTLGIP N +MA+M+ A IHGI PGP V+ QP++ WG++ASMWIGNL Sbjct: 308 NAGAQSSFIPLLTLGIPSNNMMAMMLSAFIIHGITPGPTVLATQPEIFWGLVASMWIGNL 367 Query: 370 MLIIINLPLVGIWVRLLRVPYRLMFPSIVVFCAIGIYSVNNAPVDVVLAGVFGLVGYWLI 429 ML++INLPL+G+WV+LL VPYRL++P+I++FC +G+YS+NN DV LA FGL+GY Sbjct: 368 MLVVINLPLIGVWVKLLTVPYRLLYPAILLFCCVGVYSINNRIFDVALAAGFGLLGYAFR 427 Query: 430 KHDFEPAPLLLGKVLGPLMEENLRRALLISRGDWSVFVSRPLSAVLLAIAAGLLVLAVLP 489 K EP PLLLG VLGPL+E N+RRAL IS G+ SVFV RP+S VLL G+L+L +LP Sbjct: 428 KAKCEPGPLLLGFVLGPLLETNIRRALTISHGNPSVFVERPISLVLLIATTGVLLLMILP 487 Query: 490 TLRAKRDEVFVESE 503 + R R+E F E E Sbjct: 488 SFRKTREEAFQEEE 501 >STM2788 [S] COG3333 Uncharacterized protein conserved in bacteria Sty Salmonella typhimurium LT2 Length = 504 Score = 394 bits (1012), Expect = e-109, Method: Compositional matrix adjust. Identities = 219/499 (43%), Positives = 327/499 (65%), Gaps = 6/499 (1%) Query: 1 MELFANLAHGFAVAFSPINLLMCLIGALVGTLVGVLPGIGTIATVAMLLPITFGL--PPV 58 M+ + L+ GFAVA +P NL++ LIG VGT+VG+LPG+G I VA+LLP+ F L P Sbjct: 1 MDTWIYLSQGFAVAMTPENLVIALIGCFVGTIVGLLPGLGPINGVAILLPLAFALHLPAE 60 Query: 59 GALIMLAGIYYGSMYGGSTTSILVNIPGEATSVVTALDGHQMAKQGRAGPALAIAAIGSF 118 ALI+LA +Y G YGG +SIL+N+PG+A +++TALDG+ MA+QG+ G AL+I+A+ SF Sbjct: 61 SALILLATVYIGCEYGGRISSILLNVPGDAAAIMTALDGYPMAQQGKGGVALSISAVSSF 120 Query: 119 FAGCVATVLIAVLGAPLTKLALAFGPAEYFSLMVLGLIFAVVLAKGSVLKAIAMIVFGLL 178 F +A I + L + +LAFGPAEYF+LMV + + + LK+ + GL Sbjct: 121 FGSLIAIGGIILFAPLLAQWSLAFGPAEYFALMVFAIACLGSMMAQNPLKSFLAALIGLG 180 Query: 179 LSMVGSDIETGASRMAFNIPELADGLGFATVAMGVFGFAEIIRNLDHGAEMNRNLVQQKI 238 L+ VG D TG R F+ L+DG+ F V +G+F +EI+ L+H + + +V+ K Sbjct: 181 LATVGVDANTGVYRFTFDSVHLSDGVQFIVVVIGLFSVSEILLMLEHTSS-GQTMVR-KT 238 Query: 239 TGLMPTRKDIADSTPAILRGTVLGSILGILPGGGAVIASFAAYTLEKKLAKDPKRFGRGA 298 ++ K+ A LR +V+G +G+LPG GA IAS Y EKKL+ + FG+G Sbjct: 239 GRMLFNLKEGAQCIGTTLRSSVIGFFVGVLPGAGATIASAITYMTEKKLSGNSDSFGKGD 298 Query: 299 IEGVAAPESANNAAAQTSFIPLLTLGIPPNAVMALMVGAMTIHGIVPGPQVMQKQPDLVW 358 I GVAAPE+ANNA+A SFIP+LTLG+P + A+M+GA+T++ I PGP + +QPD+VW Sbjct: 299 IRGVAAPEAANNASACGSFIPMLTLGVPGSGTTAVMMGALTLYNITPGPAMFTEQPDIVW 358 Query: 359 GMIASMWIGNLMLIIINLPLVGIWVRLLRVPYRLMFPSIVVFCAIGIYSVNNAPVDVVLA 418 G+IA++ I N+ML+I+N+PL+G++ R+L +P + P+I A+G+Y+V++ D+VL Sbjct: 359 GLIAALLIANVMLLIMNIPLIGLFTRMLTIPLWFLVPAIAAVSAVGVYAVHSTTFDLVLM 418 Query: 419 GVFGLVGYWLIKHDFEPAPLLLGKVLGPLMEENLRRALLISRGDWSVFVSRPLSAVLLAI 478 G++GY L K F +PL+LG VLG ++E+NLRRAL IS G+ ++ ++ LL + Sbjct: 419 VALGVLGYILRKMHFPMSPLILGFVLGEMLEQNLRRALSISNGNMAILWQSGVAKALLIM 478 Query: 479 AAGLLVLAVLPTLRAKRDE 497 A ++V+ V P LR R Sbjct: 479 A--IMVIVVPPVLRLLRKH 495