BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0251.0008.p (217 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA3512 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 153 3e-37 mlr6798 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 147 2e-35 BH2681 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 138 1e-32 AGl3063 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate trans... 137 2e-32 FN0237 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transp... 135 9e-32 >PA3512 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Pae Pseudomonas aeruginosa Length = 258 Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 75/197 (38%), Positives = 127/197 (64%) Query: 16 HLWATLVEVLSGFVLGCAAGLIIGAMISLIPVFERLVYPYLVALQTLPKVAIAPLFIIWF 75 H T +E++ GF LG G+ IG + L P E ++ PY++ALQ PKVA APLF++W Sbjct: 58 HTAITSLEIVVGFALGALLGVSIGVALGLSPTTEAMLSPYILALQIAPKVAFAPLFVMWL 117 Query: 76 GYGLTSKIVITALVCFFPVLVSVIAGFHSTDKDQLDMMKAFGATKLQTLMRLRIPSALVL 135 GY + KI+I L+ FFPV+++V++ + D D +++++A A++ Q + PSA+ Sbjct: 118 GYTVYPKILIAVLIVFFPVMINVLSAIRTVDPDMINLVRAMSASRWQIFRLVEFPSAMAA 177 Query: 136 IFAGLEIAAVLAVIGAIVGEFVGAQVGLGYLVVTLNFSMDVSGVFAVLIILSAIGLVMHG 195 +F+GL IA+ LAVIG VGE VG GLG+L+V + +GVF +++L+ IG++ +G Sbjct: 178 LFSGLRIASTLAVIGVTVGELVGGNKGLGFLLVDAEGQGNTAGVFVAIVMLTLIGVLAYG 237 Query: 196 LMRYAARRYIFWIRRSD 212 + +A +R + ++ +++ Sbjct: 238 AVVWAEKRVLHYLPKAN 254 >mlr6798 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Mlo Mesorhizobium loti Length = 275 Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 82/187 (43%), Positives = 121/187 (64%), Gaps = 7/187 (3%) Query: 19 ATLV---EVLSGFVLGCAAGLIIGAMISLIPVFERLVYPYLVALQTLPKVAIAPLFIIWF 75 ATLV E+L GF++ G+ I +I R +YP +V Q +PKVA+AP+FI+WF Sbjct: 77 ATLVTAGEILFGFLVSVVVGIAIALVIVRFDWLGRALYPLVVLFQNVPKVALAPIFILWF 136 Query: 76 GYGLTSKIVITALVCFFPVLVSVIAGFHSTDKDQLDMMKAFGATKLQTLMRLRIPSALVL 135 GYGL KI + ++ FFPV +S++AG S D+ L +M + GA++ Q L R+R+P +L Sbjct: 137 GYGLAPKIGLILVIAFFPVTLSMLAGMQSVDRSLLSLMNSVGASRTQILFRIRVPHSLPN 196 Query: 136 IFAGLEIAAVLAVIGAIVGEFVGAQVGLGYLVVTLNFSMDVSGVFAVLIILSAIGLVMHG 195 + AG +IAA L+VIGAIVGEF GA GLGY++ + +D + VFA L+++S +G+ + Sbjct: 197 LMAGTKIAATLSVIGAIVGEFAGASDGLGYVIQFASTQLDTALVFAALLLVSVLGIAFY- 255 Query: 196 LMRYAAR 202 YAA Sbjct: 256 ---YAAE 259 >BH2681 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Bha Bacillus halodurans Length = 250 Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 76/185 (41%), Positives = 110/185 (59%) Query: 8 VTSGMIWPHLWATLVEVLSGFVLGCAAGLIIGAMISLIPVFERLVYPYLVALQTLPKVAI 67 ++ + + HL ATL + G L G+++ ++ ER VYP LVA QT+P +A+ Sbjct: 47 LSESLFFTHLPATLAIISIGLALSIVLGILLSLLMFWNERVERAVYPLLVASQTIPVIAL 106 Query: 68 APLFIIWFGYGLTSKIVITALVCFFPVLVSVIAGFHSTDKDQLDMMKAFGATKLQTLMRL 127 AP+F++WFGY + SK+ +T L+ FFP+ V+ G ST++ ++ GATK Q RL Sbjct: 107 APIFVLWFGYSIWSKVAVTVLLTFFPITVNTYDGLKSTNRQYEELFYTMGATKRQLFYRL 166 Query: 128 RIPSALVLIFAGLEIAAVLAVIGAIVGEFVGAQVGLGYLVVTLNFSMDVSGVFAVLIILS 187 +PS L GL IA LAVIGA VGE++GA GLGY + D GVFA + ILS Sbjct: 167 FVPSTLPSFLTGLRIAVPLAVIGAAVGEWLGANEGLGYFSRRMMTQFDGPGVFAPIFILS 226 Query: 188 AIGLV 192 +G++ Sbjct: 227 LLGIL 231 >AGl3063 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 261 Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 72/203 (35%), Positives = 120/203 (59%) Query: 10 SGMIWPHLWATLVEVLSGFVLGCAAGLIIGAMISLIPVFERLVYPYLVALQTLPKVAIAP 69 SG ++ TL E+ G G AG+++ I+ P F RLV+P ++ LQ P +AP Sbjct: 45 SGFLFGQAMVTLGEMALGLAAGVTAGILVAFTIAATPRFGRLVWPMVLVLQAFPVFVLAP 104 Query: 70 LFIIWFGYGLTSKIVITALVCFFPVLVSVIAGFHSTDKDQLDMMKAFGATKLQTLMRLRI 129 + ++WFG+G+ SK+V+TA++ FFPV + G + TD+ LD A+ Q L RLR+ Sbjct: 105 ILVLWFGFGMASKVVMTAVIIFFPVASAFTDGLNRTDRAILDAASLTEASHWQILTRLRV 164 Query: 130 PSALVLIFAGLEIAAVLAVIGAIVGEFVGAQVGLGYLVVTLNFSMDVSGVFAVLIILSAI 189 P AL + +GL +AA LA +GA++GE+VGA GLG++++ N M +FA + IL+ + Sbjct: 165 PLALPSLISGLRVAAPLAPLGAVIGEWVGASAGLGFVMIQSNARMQTDTMFAAMAILAVM 224 Query: 190 GLVMHGLMRYAARRYIFWIRRSD 212 +++ ++ A W + ++ Sbjct: 225 AVLLRLIVDRATANLAPWAKETE 247 >FN0237 [P] COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Fnu Fusobacterium nucleatum Length = 241 Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 64/192 (33%), Positives = 115/192 (59%) Query: 16 HLWATLVEVLSGFVLGCAAGLIIGAMISLIPVFERLVYPYLVALQTLPKVAIAPLFIIWF 75 H T++E L G LG ++ ++ R+VYP L+ QT+P +A+AP+ ++W Sbjct: 39 HFKITMLEALIGLSLGIIIASLLAIIMDSFETINRIVYPLLIFTQTIPTIALAPILVLWL 98 Query: 76 GYGLTSKIVITALVCFFPVLVSVIAGFHSTDKDQLDMMKAFGATKLQTLMRLRIPSALVL 135 GY +T KIV+ + FP+++S++ GF DKD + ++K A++ Q L ++IP+AL Sbjct: 99 GYDMTPKIVLIVINTTFPIVISILDGFRHCDKDAIQLLKLMNASRWQILYHVKIPTALTY 158 Query: 136 IFAGLEIAAVLAVIGAIVGEFVGAQVGLGYLVVTLNFSMDVSGVFAVLIILSAIGLVMHG 195 +AGL ++ A I A+V E++G GLG ++ + D +FA++I++SAI L+ Sbjct: 159 FYAGLRVSVSYAFISAVVSEWLGGFEGLGVFMIRAKKAFDYDTMFAIIILVSAISLISME 218 Query: 196 LMRYAARRYIFW 207 L++ + +++I W Sbjct: 219 LVKRSEKKFIKW 230