BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0249.0041.p (1100 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value PA1400_3 [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase... 731 0.0 CC3214_3 [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase... 652 0.0 DRA0310_3 [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferas... 588 e-167 PA1400_1 [I] COG0439 Biotin carboxylase Pae Pseudomonas aeruginosa 468 e-131 DRA0310_1 [I] COG0439 Biotin carboxylase Dra Deinococcus radiodu... 418 e-116 >PA1400_3 [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Pae Pseudomonas aeruginosa Length = 508 Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/508 (68%), Positives = 405/508 (79%) Query: 593 RKAITLDENRPASVERRRKTNQRTARENIAQLVDEGSFVEYGSLAIAAQRRRRKVEDLIK 652 R+A DE RP ++ RRRKT QRTAREN+ L+DEGSF EYG A+AAQRRRR E+L++ Sbjct: 1 RQAALGDERRPQALARRRKTGQRTARENVLDLLDEGSFSEYGGFALAAQRRRRSAEELLE 60 Query: 653 NTPADGLISGVATVNAKNFGADGARCMVISYDYTVLAGTQGHMNHKKIDRMLGLAEQWRM 712 +PADGL++G TV A +FG ARC+V++YDYTV AGTQG MNHKK DR+LGLAEQWR+ Sbjct: 61 LSPADGLVAGTGTVGAASFGVQAARCLVLAYDYTVFAGTQGVMNHKKTDRLLGLAEQWRL 120 Query: 713 PLVFYAEGGGGRPGDTDRLGMTGLDGPSFVQFAKLSGLVPVVGVVSGYCFAGNAAMLGVC 772 PLV +AEGGGGRPGDTD +G+ GLD +FV A+LSGLVP+VGVVSG CFAGNAA+LG C Sbjct: 121 PLVLFAEGGGGRPGDTDFVGVAGLDCHTFVGMARLSGLVPLVGVVSGRCFAGNAALLGCC 180 Query: 773 DVIIATKNASIGMGGPAMIEGGGLGVYHPAEVGPVSFQSPNGVIDILVEDEEEATTVAQK 832 DVIIAT++A+IGM GPAMIEGGGLG + EVGP Q PNGVID+LVEDE EA VA++ Sbjct: 181 DVIIATRDATIGMAGPAMIEGGGLGRFAAEEVGPTGVQGPNGVIDVLVEDEAEAVAVARR 240 Query: 833 YLSYFQGAVQDWKAPDQRLLRRAIPENRLRVYDIRNVIDLIADEGSVLEIRRDFGVGMIT 892 YL YFQG + DW DQR LR +PENRLR YDIR I+++AD GSVLE+RR F G++T Sbjct: 241 YLGYFQGPLPDWSCADQRELRHLVPENRLRAYDIRQAIEVLADRGSVLELRRQFAPGLVT 300 Query: 893 AFIRIEGKPFGLIANNPKHLGGAIDAPAGDKAARFMQLCDAFDIPIVSLCDTPGFMVGPE 952 A +RIEG+ FGLIANNP HLGGAIDA AGDKAARFMQLCDAFDIPIVSLCDTPGFMVGPE Sbjct: 301 ALLRIEGRAFGLIANNPGHLGGAIDAAAGDKAARFMQLCDAFDIPIVSLCDTPGFMVGPE 360 Query: 953 AEKTAIVRHVARMFVTGASITVPLFGVVLRKGYGLGAQSMIGGGFHASFFTVAWPTGEFG 1012 AEK A VRHV+RMFV+ AS+TVP F VVLRKGYGLGAQ+M G FH+ FTVAWP+GEFG Sbjct: 361 AEKQATVRHVSRMFVSAASLTVPFFTVVLRKGYGLGAQAMAAGSFHSPLFTVAWPSGEFG 420 Query: 1013 GMGLEGYVRLGFRKEMEAIEDPVEREKYFQTKVAELYANGKAVSIASVLEIDEVIDPADT 1072 MGLEG VRLGF KE+ A EDP RE F+ V + Y NGKA+++AS LEID VIDPA+T Sbjct: 421 AMGLEGAVRLGFAKELAAEEDPQRREALFRGMVDKAYRNGKALNMASYLEIDAVIDPAET 480 Query: 1073 RHWIMAGLRSVPKPEPRTHRKRPCIDAW 1100 R W++ GL +P PR RKRP +D W Sbjct: 481 RAWLLRGLAVAGEPAPRAGRKRPFVDTW 508 >CC3214_3 [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Ccr Caulobacter vibrioides Length = 505 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 305/484 (63%), Positives = 379/484 (78%) Query: 597 TLDENRPASVERRRKTNQRTARENIAQLVDEGSFVEYGSLAIAAQRRRRKVEDLIKNTPA 656 TLDE RP +V +RRKT RTARENI LVD GSF+EYG+LAIAAQ+RRR EDLI NTPA Sbjct: 5 TLDEARPEAVAKRRKTGHRTARENIDDLVDPGSFLEYGALAIAAQKRRRSTEDLIANTPA 64 Query: 657 DGLISGVATVNAKNFGADGARCMVISYDYTVLAGTQGHMNHKKIDRMLGLAEQWRMPLVF 716 DGLI+G+ TVN F D AR ++YD+TVLAGTQG MNH+K DR++ L ++P+V+ Sbjct: 65 DGLITGIGTVNGALFPPDKARTAALAYDFTVLAGTQGAMNHRKSDRLMALIADQKLPVVW 124 Query: 717 YAEGGGGRPGDTDRLGMTGLDGPSFVQFAKLSGLVPVVGVVSGYCFAGNAAMLGVCDVII 776 +AEGGGGRPGDTD + GLD P+F FA+LSGLVP + +V+G CFAGNAA+ G+ ++II Sbjct: 125 FAEGGGGRPGDTDTTAVAGLDVPTFRSFAQLSGLVPKIAIVAGRCFAGNAAIAGLSEIII 184 Query: 777 ATKNASIGMGGPAMIEGGGLGVYHPAEVGPVSFQSPNGVIDILVEDEEEATTVAQKYLSY 836 AT+++++GMGGPAMIEGGGLGV+ P E+GP + Q NGVIDIL +DE AT +A++ LSY Sbjct: 185 ATRDSNLGMGGPAMIEGGGLGVFRPEEIGPSAHQWKNGVIDILADDEAHATRLAKQALSY 244 Query: 837 FQGAVQDWKAPDQRLLRRAIPENRLRVYDIRNVIDLIADEGSVLEIRRDFGVGMITAFIR 896 FQG + W APDQR LR AIPENRLRVYD+R +I+ + DEGS LE+R F GM+T IR Sbjct: 245 FQGTLSTWTAPDQRRLRHAIPENRLRVYDVRGLINHLVDEGSFLELRGGFAAGMVTGLIR 304 Query: 897 IEGKPFGLIANNPKHLGGAIDAPAGDKAARFMQLCDAFDIPIVSLCDTPGFMVGPEAEKT 956 IEG+P GLIAN+P+HLGGAID +KAARF+QLCDAF +P++SLCDTPGFMVGP++E Sbjct: 305 IEGRPMGLIANDPRHLGGAIDCEGAEKAARFLQLCDAFALPVLSLCDTPGFMVGPDSEDA 364 Query: 957 AIVRHVARMFVTGASITVPLFGVVLRKGYGLGAQSMIGGGFHASFFTVAWPTGEFGGMGL 1016 A VR V+R F+ GA + PLF +V RKGYGLGAQ+M GG FH+ F AWPTGEFGGMGL Sbjct: 365 AAVRRVSRQFIAGAKLRSPLFTIVTRKGYGLGAQAMAGGSFHSPAFIAAWPTGEFGGMGL 424 Query: 1017 EGYVRLGFRKEMEAIEDPVEREKYFQTKVAELYANGKAVSIASVLEIDEVIDPADTRHWI 1076 EG V+LG+RKE+EA DPV+++ + VA LYA GKA S+A+ LEID VIDPADTR W+ Sbjct: 425 EGAVKLGYRKELEAETDPVKQKALYDQLVARLYAAGKATSMAAALEIDAVIDPADTRRWV 484 Query: 1077 MAGL 1080 + GL Sbjct: 485 IGGL 488 >DRA0310_3 [I] COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Dra Deinococcus radiodurans Length = 509 Score = 588 bits (1516), Expect = e-167, Method: Compositional matrix adjust. Identities = 290/504 (57%), Positives = 370/504 (73%), Gaps = 3/504 (0%) Query: 597 TLDENRPASVERRRKTNQRTARENIAQLVDEGSFVEYGSLAIAAQRRRRKVEDLIKNTPA 656 T DE RPA+VE+R + TAREN+A L+D GSF E+G+LA+AAQR RR E+L+ +PA Sbjct: 9 TTDEARPAAVEKRHAAGKLTARENVAALLDAGSFNEHGALALAAQRGRRSEEELLALSPA 68 Query: 657 DGLISGVATVNAKNFGADGARCMVISYDYTVLAGTQGHMNHKKIDRMLGLAEQWRMPLVF 716 DGLI+GV TVNA F D A C V +YDYTVLAGTQG+ NH K+DR++ LA QW+ PLV Sbjct: 69 DGLITGVGTVNAGQF-PDTAACAVAAYDYTVLAGTQGYFNHHKLDRLIALAGQWKWPLVL 127 Query: 717 YAEGGGGRPGDTDRLGMTGLDGPSFVQFAKLSGLVPVVGVVSGYCFAGNAAMLGVCDVII 776 +AEGGGGRPGDTD L P+F+ FA LSG VP+VGV +G CFAGNAA+LG CDV+I Sbjct: 128 FAEGGGGRPGDTDMPVAAALVTPTFLNFAALSGQVPLVGVAAGACFAGNAALLGCCDVVI 187 Query: 777 ATKNASIGMGGPAMIEGGGLGVYHPAEVGPVSFQSPNGVIDILVEDEEEATTVAQKYLSY 836 AT+++SIG+GGPAMIEGGGLGV ++GP + GV+D+L E++ EA +A++YL+Y Sbjct: 188 ATRDSSIGLGGPAMIEGGGLGVVAAGDIGPAEVLAQKGVVDLLAENDAEANELARRYLTY 247 Query: 837 FQGAVQDWKAPDQRLLRRAIPENRLRVYDIRNVIDLIADEGSVLEIRRDFGVGMITAFIR 896 FQG V W+A DQR LR IP+ R R YD+R ++ L+AD GSVLE+RR F G++TA +R Sbjct: 248 FQGDVTGWEAADQRELRWVIPQVRKRAYDVRALLHLLADTGSVLELRRAFAPGLLTALVR 307 Query: 897 IEGKPFGLIANNPKHLGGAIDAPAGDKAARFMQLCDAFDIPIVSLCDTPGFMVGPEAEKT 956 I GK FG+IAN+P LGGAIDA DKAARF+ LCD +P++SL DTPGFMVGP +E Sbjct: 308 IGGKAFGVIANDPAVLGGAIDAAGADKAARFLNLCDTHRLPVLSLVDTPGFMVGPASEAE 367 Query: 957 AIVRHVARMFVTGASITVPLFGVVLRKGYGLGAQSMIGGGFHASFFTVAWPTGEFGGMGL 1016 VRHV+R+FV A +TVP F VV R+ YGLGAQ+M G HA TV+WP GEFG MGL Sbjct: 368 GAVRHVSRLFVRAAKLTVPFFAVVTRRAYGLGAQAMAAGSLHAPALTVSWPGGEFGPMGL 427 Query: 1017 EGYVRLGFRKEMEAIEDPVEREKYFQTKVAELYANGKAVSIASVLEIDEVIDPADTRHWI 1076 EG VRLG+R+E+ A+ DP ERE +Q VA+ YA G+AV++A+ LE+D VIDPA+TR+W+ Sbjct: 428 EGAVRLGYRRELAAVSDPQEREALYQKLVAQAYAQGEAVNVAAHLEVDAVIDPAETRNWL 487 Query: 1077 MAGLRSVPKPEPRTHRKRPCIDAW 1100 + LR P R R+ +D W Sbjct: 488 LRALRVSPYSAQR--REGGLVDPW 509 >PA1400_1 [I] COG0439 Biotin carboxylase Pae Pseudomonas aeruginosa Length = 458 Score = 468 bits (1205), Expect = e-131, Method: Compositional matrix adjust. Identities = 252/461 (54%), Positives = 337/461 (73%), Gaps = 7/461 (1%) Query: 3 FKNLLIANRGEIAIRIARAAADSGIATVAIHPADDAASLHVRSADASHEIPGRGARAYLD 62 F LLIANRGEIAIRIARA AD GI +VA+ DDAASLHVR AD + + GRG AYLD Sbjct: 5 FNALLIANRGEIAIRIARACADLGIRSVAVFAEDDAASLHVRKADVALPLAGRGVAAYLD 64 Query: 63 IEAVIAAAKATGCDALHPGYGFLSENTQLARRCAEERITFVGPSPEALDLFGDKAKAKAL 122 ++ ++A A GC+A+HPGYGFL+EN + ARRC I FVGP E LDLFGDKA A+AL Sbjct: 65 MDRLVALALEQGCEAIHPGYGFLAENGEFARRCQRAGIHFVGPQAEVLDLFGDKAAARAL 124 Query: 123 AKKCGVPIIAGTSGATSLDEAKAFFAELGAGAAVMIKAIAGGGGRGMRLVEDAAKLDEAY 182 A++ VP++AG + A S++EA+AF LG GAAVM+KA+AGGGGRGMR VE+ A+L +AY Sbjct: 125 AERLEVPLVAGINRAVSVEEAEAFLEGLGDGAAVMLKALAGGGGRGMRAVEEVAQLADAY 184 Query: 183 ARCQSEAKAAFGSDAVYVERLIRKARHVEVQIIGDRHGAISHLWERECTIQRRNQKLIEV 242 RC++EA+AAFG D +YVE+ + +ARH+EVQ++GD GA+SHLWER+C++QRR QKL+E+ Sbjct: 185 RRCRAEAQAAFGRDELYVEQRVARARHIEVQVLGDGSGAVSHLWERDCSLQRRQQKLLEI 244 Query: 243 APSPSLSEGMRARIIEAAKQLASAARYDNLGTFEFLVDDEAGESEGAFAFIEANPRLQVE 302 APSP L E R +I+ A ++A A RY +GTFEFLVDD E G F F+EANPR+QVE Sbjct: 245 APSPDLPEATREALIDCALRMAGAVRYRGIGTFEFLVDD---ERPGRFYFMEANPRIQVE 301 Query: 303 HTVTEEVLGIDLVRSQLAVAAGATLVSLGLAQSAVPLPRGYAMQLRVNMEVMDEKGVTKP 362 HTVTEEV G+DL+ +QL +AAG L +LGL + P G A+QLR+N+E + G +P Sbjct: 302 HTVTEEVTGVDLLHAQLRLAAGMELAALGLERP--PAIGGCAVQLRINLETLAADGSARP 359 Query: 363 TGGTLSVFDLPSGPGVRVDTFGYSGYRTSAAFDSLLAKVIVHSPSPKWTDVVHKASRALR 422 GT+ ++ PSGPG+RVD +GY+GYR S ++DSLLAK++V + + +A RAL Sbjct: 360 AVGTIGAYEPPSGPGLRVDGYGYAGYRVSPSYDSLLAKLVVRGAD--YPAALRRAYRALC 417 Query: 423 EFRIGGVATNIPFLGAILAHQSFGRNKISTNFIDTHVAALV 463 EFR+ GVA+N+ L +L H + N++ T F+++H+ L+ Sbjct: 418 EFRLEGVASNLDLLRNLLLHPAVQANRVDTRFVESHLETLL 458 >DRA0310_1 [I] COG0439 Biotin carboxylase Dra Deinococcus radiodurans Length = 463 Score = 418 bits (1074), Expect = e-116, Method: Compositional matrix adjust. Identities = 238/468 (50%), Positives = 310/468 (66%), Gaps = 11/468 (2%) Query: 5 NLLIANRGEIAIRIARAAADSGIATVAIHPADDAASLHVRSADASHEIPGRGARAYLDIE 64 +LIANRGE+A+RI RA + G +VA++ DDA SLHVR AD + + GRGA AYLD Sbjct: 4 RVLIANRGEVAVRIERAVSALGWQSVAVYAPDDAGSLHVRRADEAVALSGRGAAAYLDGA 63 Query: 65 AVIAAAKATGCDALHPGYGFLSENTQLARRCAEERITFVGPSPEALDLFGDKAKAKALAK 124 A++ A+ +HPGYGFLSEN AR CA+ + FVGP P+ LDLFGDK++A+ LA+ Sbjct: 64 ALLRVAQEHAATHVHPGYGFLSENADFARACAQAGLVFVGPDPDTLDLFGDKSRARGLAQ 123 Query: 125 KCGVPIIAGTSGATSLDEAKAFFAELGAGAAVMIKAIAGGGGRGMRLVEDAAKLDEAYAR 184 + GVP+I GT GAT+L+EA AF G GA VM+KA +GGGGRGMR+V A L A+ + Sbjct: 124 RLGVPVIPGTDGATTLEEAAAFMQAQG-GAPVMLKACSGGGGRGMRVVRQAGDLAAAFEQ 182 Query: 185 CQSEAKAAFGSDAVYVERLIRKARHVEVQIIGDRHGAISHLWERECTIQRRNQKLIEVAP 244 EA+ A G +Y ERLI +ARH+EVQ+ GD +++HLWER+CT+QRR+QKL+E AP Sbjct: 183 ASREARLAVGQGDLYAERLIERARHIEVQVAGDGQ-SVTHLWERDCTVQRRHQKLLEFAP 241 Query: 245 SPSLSEGMRARIIEAAKQLASAARYDNLGTFEFLVDDEAGESEGAFAFIEANPRLQVEHT 304 +P L + +R +I AA QLA +Y LGTFEFLV G F FIEANPRLQVEHT Sbjct: 242 APHLPQAVRTALIGAALQLAQEVKYRCLGTFEFLVT-----PGGDFYFIEANPRLQVEHT 296 Query: 305 VTEEVLGIDLVRSQLAVAAGATLVSLGLAQS---AVPLPRGYAMQLRVNMEVMDEKGVTK 361 VTEE G DLV +QL +AAG TL ++GLA A P P G A+Q RVNME + G Sbjct: 297 VTEEWCGTDLVTAQLRLAAGETLTAVGLATQPADAAP-PPGQAVQARVNMETLGADGQVH 355 Query: 362 PTGGTLSVFDLPSGPGVRVDTFGYSGYRTSAAFDSLLAKVIVHSPSPKWTDVVHKASRAL 421 GG + F P GPGVRVDTF +G S +D+LLAKV+VH ++ +A+ AL Sbjct: 356 VGGGQVQTFTPPGGPGVRVDTFVTTGLTPSPQYDALLAKVVVHRRDAALPGLLRQAATAL 415 Query: 422 REFRIGGVATNIPFLGAILAHQSFGRNKISTNFIDTHVAALVGAAQEH 469 EF+I GV+TN+ FL A+L H ++ST+++D + LV A E+ Sbjct: 416 SEFQIAGVSTNLAFLQALLHHPDVQHYELSTHWLDERLPELVTQAAEY 463