BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0249.0035.p (448 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value mlr2417 [O] COG0265 Trypsin-like serine proteases, typically per... 257 3e-68 CC0702 [O] COG0265 Trypsin-like serine proteases, typically peri... 256 6e-68 MTH1813 [O] COG0265 Trypsin-like serine proteases, typically per... 205 2e-52 slr1204 [O] COG0265 Trypsin-like serine proteases, typically per... 172 2e-42 alr0702 [O] COG0265 Trypsin-like serine proteases, typically per... 171 3e-42 >mlr2417 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Mlo Mesorhizobium loti Length = 345 Score = 257 bits (657), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 143/220 (65%), Positives = 172/220 (78%), Gaps = 7/220 (3%) Query: 1 LLDAYSNAVIDVTDRVGPAVVRVETGPKVRNARERGGLGSGIVISPDGFVLTNSHVVGSS 60 LLDAYS V D DR+GPAV R+E +GG GSG VI+PDG V+TN HVVG + Sbjct: 43 LLDAYSTTVADAVDRIGPAVCRIE------RIGGQGGHGSGFVIAPDGLVVTNFHVVGDA 96 Query: 61 KEIRLRDTEGFVTDAHVLGVDPDTDLALLRADGARDLPYASLGNSKTLRRGQLVVAIGNP 120 + +R+ +G ++ VLG DPDTD+AL+RADG+ A LG+SK LRRGQ+ +AIGNP Sbjct: 97 RTVRVSMPDGASSEGRVLGRDPDTDIALVRADGSFT-DVAPLGDSKRLRRGQIAIAIGNP 155 Query: 121 LGFESTVTAGVVSALGRSIRSVSGRTIEDVIQTDAALNPGNSGGPLVSSKGEVIGINTAI 180 LGFE TVT+GVVSALGRS+R+ +GR I+DVIQTDAALNPGNSGGPLVSS GEVIG+NTA+ Sbjct: 156 LGFEWTVTSGVVSALGRSMRASTGRLIDDVIQTDAALNPGNSGGPLVSSAGEVIGVNTAM 215 Query: 181 INGAQGICFAVASNTAQFVLSEIIRHGYVRRAYIGVAGQT 220 I+GAQGI FAVASNTA FV+SEIIR G VRRA+IGV+ T Sbjct: 216 IHGAQGIAFAVASNTANFVISEIIRFGRVRRAFIGVSADT 255 >CC0702 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Ccr Caulobacter vibrioides Length = 363 Score = 256 bits (655), Expect = 6e-68, Method: Compositional matrix adjust. Identities = 135/223 (60%), Positives = 167/223 (74%), Gaps = 3/223 (1%) Query: 1 LLDAYSNAVIDVTDRVGPAVVRVETGPKVRNARERGGLGSGIVISPDGFVLTNSHVVGSS 60 LLDAYSNAV+ + VGP+VVR+ P + + R G+GSG I+ G +LTNSHVV + Sbjct: 55 LLDAYSNAVVRAVEHVGPSVVRIH--PMLADPR-MSGVGSGFAIAEGGLILTNSHVVQGA 111 Query: 61 KEIRLRDTEGFVTDAHVLGVDPDTDLALLRADGARDLPYASLGNSKTLRRGQLVVAIGNP 120 + EG A +G DPDTDLAL++ D A ++P A LG+SK LRRGQLV+AIG P Sbjct: 112 NRFIVITAEGRSLTARCVGDDPDTDLALIKVDQAVEIPTARLGDSKKLRRGQLVIAIGAP 171 Query: 121 LGFESTVTAGVVSALGRSIRSVSGRTIEDVIQTDAALNPGNSGGPLVSSKGEVIGINTAI 180 LGFE+TVT GVVSALGRS+R+ GR IED+IQTDAALNPGNSGGPLVSS GEV+GI TAI Sbjct: 172 LGFEATVTTGVVSALGRSLRAERGRLIEDLIQTDAALNPGNSGGPLVSSTGEVVGIATAI 231 Query: 181 INGAQGICFAVASNTAQFVLSEIIRHGYVRRAYIGVAGQTAPV 223 I G QG+CFAVA+NTA+FV+ E++ HG+VRR IG+ Q AP+ Sbjct: 232 IAGYQGLCFAVAANTAKFVIGELLAHGHVRRGSIGLVAQQAPI 274 >MTH1813 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Mth Methanothermobacter thermautotrophicus Length = 328 Score = 205 bits (521), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 112/219 (51%), Positives = 153/219 (69%), Gaps = 2/219 (0%) Query: 1 LLDAYSNAVIDVTDRVGPAVVRVETGPKVRNARERGGLGSGIVISPDGFVLTNSHVVGSS 60 ++DAYS AV+ DRV P+VVRV T + +N R GG GSG++ + G ++TNSHVV S Sbjct: 23 IMDAYSEAVMGAADRVSPSVVRVTTVARSKN-RTVGG-GSGLIYTEYGHIITNSHVVHGS 80 Query: 61 KEIRLRDTEGFVTDAHVLGVDPDTDLALLRADGARDLPYASLGNSKTLRRGQLVVAIGNP 120 + I + G A V+G DP TD+++L+ + +L +S +R GQL +AIGNP Sbjct: 81 ERIEVTLNTGEEYRATVVGDDPHTDISVLKIEPQHELRTPEFADSSRVRVGQLALAIGNP 140 Query: 121 LGFESTVTAGVVSALGRSIRSVSGRTIEDVIQTDAALNPGNSGGPLVSSKGEVIGINTAI 180 GF+ TVTAGVVSA GRS+R+++GR ++ VIQTDAALNPG SGGPLV +G V+GINTA+ Sbjct: 141 FGFQFTVTAGVVSATGRSLRTMTGRLVDGVIQTDAALNPGKSGGPLVDFRGRVLGINTAL 200 Query: 181 INGAQGICFAVASNTAQFVLSEIIRHGYVRRAYIGVAGQ 219 I AQG+CFA+ SNT + V ++I G +RRA++GVA Q Sbjct: 201 IRPAQGLCFAIPSNTVREVADKLIEDGKIRRAHLGVACQ 239 >slr1204 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Syn Synechocystis Length = 452 Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 106/264 (40%), Positives = 152/264 (57%), Gaps = 32/264 (12%) Query: 6 SNAVIDVTDRVGPAVVRVETGPKVR------------------------NARERGGLGSG 41 SN V+DV + GPAVVR+ V+ N R + G GSG Sbjct: 116 SNFVVDVVESTGPAVVRINAQKTVKSQVPQAFNDPFLQRFFGSQMPPMPNERVQRGTGSG 175 Query: 42 IVISPDGFVLTNSHVVGSSKEIRLRDTEGFVTDAHVLGVDPDTDLALLRADGARDLPYAS 101 ++S DG + TN+HVV + E+ + +G V+G DP TD+A+++ + A DLP + Sbjct: 176 FIVSNDGKIFTNAHVVDGADEVTVTLKDGRSFPGRVMGSDPSTDVAVVKIE-AGDLPTVA 234 Query: 102 LGNSKTLRRGQLVVAIGNPLGFESTVTAGVVSALGRSIRS----VSGRTIEDVIQTDAAL 157 LG+S L+ G+ +AIGNPLG ++TVT G++SA GR RS V + +E IQTDAA+ Sbjct: 235 LGDSDHLQVGEWAIAIGNPLGLDNTVTTGILSATGR--RSADIGVPDKRVE-FIQTDAAI 291 Query: 158 NPGNSGGPLVSSKGEVIGINTAIINGAQGICFAVASNTAQFVLSEIIRHGYVRRAYIGVA 217 NPGNSGGPL+++ G+VIG+NTAII AQGI FA+ N AQ + ++I G V AY+G+ Sbjct: 292 NPGNSGGPLLNADGQVIGMNTAIIQNAQGIGFAIPINKAQEIAQQLIATGKVEHAYLGIQ 351 Query: 218 GQTAPVXGAGRRREQDGRAPDADR 241 T + R++ G D+ Sbjct: 352 MVTMTPELQSQIRQETGMNIPVDK 375 >alr0702 [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain Nos Nostoc sp. PCC 7120 Length = 429 Score = 171 bits (434), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 102/235 (43%), Positives = 144/235 (61%), Gaps = 27/235 (11%) Query: 7 NAVIDVTDRVGPAVVRVET---------------------GPKVRNARERG--GLGSGIV 43 N V V RVGPAVVR+E G ++ +ER G GSG + Sbjct: 92 NFVTQVVQRVGPAVVRIEASRTVTSRLPAEFNDPFFRRFFGSQLPQQQERVQRGTGSGFL 151 Query: 44 ISPDGFVLTNSHVVGSSKEIRLRDTEGFVTDAHVLGVDPDTDLALLRADGARDLPYASLG 103 IS DG +LTN+HVV + +R+ +G VLG D TD+A+++ A +LP ++G Sbjct: 152 ISADGSILTNAHVVDGADTVRVILKDGRSFQGKVLGTDNLTDVAVVKIQ-ANNLPTLTVG 210 Query: 104 NSKTLRRGQLVVAIGNPLGFESTVTAGVVSALGRSIRSVSG--RTIEDVIQTDAALNPGN 161 NS L+ GQ +AIGNPLG ++TVT G++SA GR+ + + +E IQTDAA+NPGN Sbjct: 211 NSDQLQPGQWAIAIGNPLGLDNTVTTGIISATGRTSNQIGAPDKRVE-YIQTDAAINPGN 269 Query: 162 SGGPLVSSKGEVIGINTAIINGAQGICFAVASNTAQFVLSEIIRHGYVRRAYIGV 216 SGGPL++ +GEVIG+NTAII GAQG+ FA+ TAQ + +++I G V+ Y+G+ Sbjct: 270 SGGPLLNYRGEVIGMNTAIIQGAQGLGFAIPIKTAQRISNQLIATGKVQHPYLGI 324