BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0249.0004.p         (106 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

RSc3258 Non COG                                                        67   8e-12

>RSc3258 Non COG
          Length = 103

 Score = 67.4 bits (163), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 1/90 (1%)

Query: 15  GSIIEIKTLMSHIMETGYRHTASGNVVPRDIITSFTCRFNGEEVFRADLYPAIAANPFIT 74
           G + ++K LM H METG R   +G VVP   IT+ T + NG+ V  A   PA++ +PF+ 
Sbjct: 13  GGVTDVKILMKHDMETGQRKDVAGKVVPAWHITNVTVQHNGKTVLDAQFGPAVSKDPFLN 72

Query: 75  F-FTTVTESGKFEFEWIGDKGFSETAQASI 103
             F    +  K    W+ + G   T +A+I
Sbjct: 73  LKFKGAAKGDKVSVTWVDNHGDKRTDEAAI 102