BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0248.0046.p         (270 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mll7621 [I] COG1884 Methylmalonyl-CoA mutase, N-terminal domain/...   100   3e-21

>mll7621 [I] COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit Mlo
           Mesorhizobium loti
          Length = 489

 Score =  100 bits (250), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 98/203 (48%), Gaps = 3/203 (1%)

Query: 22  WRKLVDGVLKGAPFE-KLVGKTYDGLKIDPIYRRATNASPLAGRAAAAPWRILQRVDHPD 80
           W  L +  L GA FE KLV  T D ++I+P+Y R + A PL      +PW + QRVD P+
Sbjct: 29  WLALAEKALAGASFEEKLVSHTDDAIRIEPLYDRVSGAEPLVRANPRSPWIVSQRVDDPN 88

Query: 81  AAQANAQALQDLENGATGLEFEFAGGPGARGFGLADVSKKTLARACGGIHLDAGIMIALN 140
             +A AQ L D+  GATGL   F G P A G+GL   + + L     G+ L+  I I ++
Sbjct: 89  IDRAKAQVLDDIAQGATGLSLVFEGAPNAFGYGLPRTA-QALETVLEGVPLNR-IQIRID 146

Query: 141 PVIGRENAGETFADMVEARKLDPAKLDLHFNYQALSTMAVRGAAAIAWPNYEKSFGQVVN 200
                    +     +  R+ DPAKL+L F     + +A  G   ++    ++S  Q + 
Sbjct: 147 THPWSRPMADWLVAFLSKRRSDPAKLNLSFGIDPAAILAGTGRLRMSIEALQESMPQSLA 206

Query: 201 GLIKRGFKGPFVLADGRPVAVAG 223
                G  G  + ADGR    AG
Sbjct: 207 HFFSMGVPGVLLEADGRVFHNAG 229