BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0248.0032.p (241 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value VC1288 [P] COG3131 Periplasmic glucans biosynthesis protein Vch ... 230 2e-60 RSp0262 Non COG 207 2e-53 RSc2908 Non COG 203 4e-52 PA5078 [P] COG3131 Periplasmic glucans biosynthesis protein Pae ... 199 5e-51 RSc3057 Non COG 194 2e-49 >VC1288 [P] COG3131 Periplasmic glucans biosynthesis protein Vch Vibrio cholerae Length = 545 Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 125/250 (50%), Positives = 162/250 (64%), Gaps = 19/250 (7%) Query: 1 MFFFGPNDRNEVDDFRPSVHDSDGLAIYNGKGESLWRPLSNPRDLQISTFQDVNPHGFGL 60 MF PN R + DDFRPSVHDSDGL + NG+GE LWRPL+NP LQ+S F D +P GFGL Sbjct: 302 MFMHSPNGREKTDDFRPSVHDSDGLLMINGRGERLWRPLANPSTLQVSAFMDNSPQGFGL 361 Query: 61 MQREKNFFAYQDIESRFEKRPSLWVEPIGDWGEGAVILFEIPTKEEIHDNIAAFWRPKAP 120 MQRE+++ YQD+E+ +EKRPSLWVEP+G+WG GAV+L EIPT+ EIHDNI AFW+P P Sbjct: 362 MQRERDYANYQDLEAHYEKRPSLWVEPVGNWGPGAVVLTEIPTQSEIHDNIVAFWKPAQP 421 Query: 121 PKAKSETNFTYRLHWG--PDA-PKPHSLARFTRSGIG--AHGENSKLFVLDLFGDNLKGI 175 A SE F+Y L+WG P+A P+ +++R T SG A +LFV+D ++G Sbjct: 422 LAAGSEYRFSYHLNWGAQPEANPQAITVSR-TASGRADIAKPTPKRLFVIDY---QVQGA 477 Query: 176 DPNSV-KGVVTAEKSEITNVVTQPNPNTGGWRLSFQCAVRKDP-----IELRAHLAQDDK 229 P + + V + I+NVV + NP G+RLSF+ DP ELRA L + Sbjct: 478 KPAQMPEPKVRSNAGVISNVVLRDNPANNGYRLSFEF----DPGEVTLAELRAELTLQEA 533 Query: 230 PLSEIWVYRW 239 E W+YRW Sbjct: 534 RPVETWLYRW 543 >RSp0262 Non COG Length = 551 Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 112/253 (44%), Positives = 152/253 (60%), Gaps = 14/253 (5%) Query: 1 MFFFGPNDRNEVDDFRPSVHDSDGLAIYNGKGESLWRPLSNPRDLQISTFQDVNPHGFGL 60 M++F + D+RP VHDSDGLA++ G GE +WRPL++P + S F D NP GFGL Sbjct: 291 MYWFSETAKGTATDWRPEVHDSDGLAMWTGSGERIWRPLNDPPRVMTSAFSDNNPRGFGL 350 Query: 61 MQREKNFFAYQDIESRFEKRPSLWVEPIGDWGEGAVILFEIPTKEEIHDNIAAFWRPKAP 120 +QR+++F Y D +E+RPSLWVEP+ WGEGAV L EIPT +EIHDNI A W PKAP Sbjct: 351 LQRDRDFNNYMD-GVHYERRPSLWVEPLEGWGEGAVQLVEIPTDDEIHDNIVAMWVPKAP 409 Query: 121 PKAKSETNFTYRLHWGPDAPKPHSLARFTRSGIGAHGE-------NSKLFVLDLFGDNLK 173 +A S YRLHW D P P LAR + +G G+ + F+++ G L+ Sbjct: 410 ARAGSHYRLRYRLHWLADEPYPTPLARCVATRLGNGGQPGQPRPRGVRKFMVEFKGGPLE 469 Query: 174 GIDPNSVK--GVVTAEKSEITNVVTQPNPNT--GGWRLSFQCAVR-KDPIELRAHLAQDD 228 + P VK V+T+ + + V T+ PN G WR F V K+P+++R L D Sbjct: 470 KV-PFGVKPEAVLTSSRGTFSYVFTEAVPNGVPGHWRAQFDLTVDGKEPVDMRLFLRLDG 528 Query: 229 KPLSEIWVYRWAP 241 KPLSE W+Y++ P Sbjct: 529 KPLSETWLYQYHP 541 >RSc2908 Non COG Length = 504 Score = 203 bits (516), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 112/256 (43%), Positives = 152/256 (59%), Gaps = 16/256 (6%) Query: 1 MFFFGPNDRNEVDDFRPSVHDSDGLAIYNGKGESLWRPLSNPRDLQISTFQDVNPHGFGL 60 MFFFG N DFRP VHDSDGL++ +G GE +WRPL+NP+ L +S+F NP GFGL Sbjct: 249 MFFFGENQPASALDFRPEVHDSDGLSMLSGTGEWIWRPLTNPKRLLVSSFSTTNPGGFGL 308 Query: 61 MQREKNFFAYQDIESRFEKRPSLWVEPIGDWGEGAVILFEIPTKEEIHDNIAAFWRPKAP 120 MQR++ F +YQ+I R+E RPS WVEP+G WG G V L +IPT +E +DN+ A+W P+ P Sbjct: 309 MQRDRAFSSYQEIGDRYELRPSAWVEPVGKWGAGRVELVQIPTPDETNDNVVAYWVPETP 368 Query: 121 PKAKSETNFTYRLHWGPDAPKPHSLARFTRSGIGAHGENSK-----------LFVLDLFG 169 PK + N YRL W + K L+ T++ +HG +K V+D G Sbjct: 369 PKPQQPFNLEYRLLWQKEGDKKPGLSWVTQTR-RSHGWTTKRPDERKPDDTIALVVDFEG 427 Query: 170 DNLKGIDPNS-VKGVVTAEKS-EITNVVTQPNPNTGGWRLSFQCAVRKD--PIELRAHLA 225 L + PN+ V+ V TA+ + +I ++ QPN TGGWR++ + D PIELR +L Sbjct: 428 PALAKLPPNAPVEPVFTADANGKIESIFGQPNTATGGWRVTVRLKRVDDDKPIELRGYLR 487 Query: 226 QDDKPLSEIWVYRWAP 241 LSE W Y P Sbjct: 488 SGGTGLSETWSYLLPP 503 >PA5078 [P] COG3131 Periplasmic glucans biosynthesis protein Pae Pseudomonas aeruginosa Length = 525 Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 105/255 (41%), Positives = 146/255 (57%), Gaps = 17/255 (6%) Query: 1 MFFFGPNDRNEVDDFRPSVHDSDGLAIYNGKGESLWRPLSNPRDLQISTFQDVNPHGFGL 60 M+ FG N +E +FRP +HDS GL I+ G GE LWRPL+NP+ L +STF NP GFGL Sbjct: 266 MYLFGSNQPSEQHNFRPELHDSSGLQIHAGNGEWLWRPLNNPKHLSVSTFSVENPKGFGL 325 Query: 61 MQREKNFFAYQDIESRFEKRPSLWVEPIGDWGEGAVILFEIPTKEEIHDNIAAFWRPKAP 120 +QR + F Y+D++ R++ RPS W+EP GDWG+G V L EIPT +E +DNI AFW P+ Sbjct: 326 LQRGREFSRYEDLDDRYDLRPSAWIEPKGDWGKGTVELVEIPTPDETNDNIVAFWNPETQ 385 Query: 121 PKAKSETNFTYRLHWGPDAPKPH------------SLARFTRSGIGAHGENSKLFVLDLF 168 P+ +F YRLHW D + H S+ + + + S V+D Sbjct: 386 PEVGKPLDFAYRLHWTMDEDELHDPKSSWVKQTMRSVGDVKQKNLIRQQDGSTALVVDFE 445 Query: 169 GDNLKGIDPNS--VKGVVTAEKSEITNVVTQPNPNTGGWRLSFQCAVR--KDPIELRAHL 224 G LK + P++ V T +E+ + NP GWRL+ + V+ K P+E+RA L Sbjct: 446 GPALKDLAPDAPVTTQVSTDSNAEVVENSLRYNPVLKGWRLTLRIKVKDPKKPVEMRAAL 505 Query: 225 AQD-DKPLSEIWVYR 238 + KPLSE W Y+ Sbjct: 506 VDEAQKPLSETWSYQ 520 >RSc3057 Non COG Length = 507 Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 112/263 (42%), Positives = 139/263 (52%), Gaps = 22/263 (8%) Query: 1 MFFFGPNDRNE-------------VDDFRPSVHDSDGLAIYNGKGESLWRPLSNPRDLQI 47 MF +G NDR + D+RP +HDSDGLAI+ G GE +WRPL+NP L+ Sbjct: 239 MFLYGENDRTDRAGDRQSAARRWRASDWRPEIHDSDGLAIWRGSGEWIWRPLANPPALRS 298 Query: 48 STFQDVNPHGFGLMQREKNFFAYQDIESRFEKRPSLWVEPIGDWGEGAVILFEIPTKEEI 107 F D P GFGL+QR++N YQD +EKRPS+WVEP WGEGAV L E+ +E Sbjct: 299 QRFADDGPRGFGLLQRDRNPDHYQDDGVFYEKRPSVWVEPAHGWGEGAVELVELSAADET 358 Query: 108 HDNIAAFWRPKAPPKAKSETNFTYRLHWGPDAPKPHSLARF--TRSGIGA-----HGENS 160 DNI AFWRP P+A E F YRL WG P LAR TR+GIG S Sbjct: 359 FDNIVAFWRPAVAPQAGQELAFGYRLSWGAQPPVAPPLARVVATRTGIGGIVGQPRRHFS 418 Query: 161 KLFVLDLFGDNLKGIDPNSVKGVVTAEKSEITNVVTQPNPNTGGWRLSFQCA--VRKDPI 218 FV+D G L +V+ V+ + + V +P N G R F PI Sbjct: 419 WRFVIDFAGGELGQPGRAAVEPVIRVSRGRVEIVSARPLANIDGVRAMFDLVPDAGNAPI 478 Query: 219 ELRAHLAQDDKPLSEIWVYRWAP 241 EL+ L D+PLSE W Y+W P Sbjct: 479 ELQLTLQSGDRPLSETWAYQWTP 501