BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0248.0027.p         (85 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc04444 [R] COG3383 Uncharacterized anaerobic dehydrogenase Sme...   100   7e-22
AGl347 [R] COG3383 Uncharacterized anaerobic dehydrogenase Atu A...    92   3e-19
mll5396 Non COG                                                        91   7e-19

>SMc04444 [R] COG3383 Uncharacterized anaerobic dehydrogenase Sme
          Sinorhizobium meliloti
          Length = 959

 Score =  100 bits (249), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 54/87 (62%), Positives = 62/87 (71%), Gaps = 2/87 (2%)

Query: 1  MSLIQETDFGTPKSKSETMVTLTIDGNQITVPEGTSIMRAAMEAGTQIPKLCATDMVDX- 59
          MSLI E D+GTP SKSE +VTLTIDG +ITVPEGTSIMRAAMEAG ++PKLCA+DM+D  
Sbjct: 1  MSLIHEIDYGTPASKSEKLVTLTIDGREITVPEGTSIMRAAMEAGIEVPKLCASDMMDAF 60

Query: 60 -SAAPARPPPARRRSCPASSCTPRASG 85
           S          R   PAS  TP A+G
Sbjct: 61 GSCRLCLVEIDGRAGMPASCTTPVAAG 87


>AGl347 [R] COG3383 Uncharacterized anaerobic dehydrogenase Atu
           Agrobacterium tumefaciens strain C58 (Cereon)
          Length = 973

 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/87 (57%), Positives = 58/87 (66%), Gaps = 2/87 (2%)

Query: 1   MSLIQETDFGTPKSKSETMVTLTIDGNQITVPEGTSIMRAAMEAGTQIPKLCATDMVDX- 59
           M+L+ E D+GTPKS +  MVTLTIDG Q+TVP GTSIMRA+ EAG  +PKLCATDMVD  
Sbjct: 14  MALVTEFDYGTPKSNATDMVTLTIDGRQVTVPTGTSIMRASREAGIDVPKLCATDMVDAF 73

Query: 60  -SAAPARPPPARRRSCPASSCTPRASG 85
            S          R   PAS  TP A+G
Sbjct: 74  GSCRLCLIEVEGRNGTPASCTTPVAAG 100


>mll5396 Non COG
          Length = 970

 Score = 90.5 bits (223), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 39/57 (68%), Positives = 49/57 (85%)

Query: 2  SLIQETDFGTPKSKSETMVTLTIDGNQITVPEGTSIMRAAMEAGTQIPKLCATDMVD 58
          SL++E D+GTP+S+++  VTL +DG  ITVPEGTSIMRAAME G +IPKLCATDM+D
Sbjct: 9  SLVEEIDYGTPESRAQKQVTLNVDGRSITVPEGTSIMRAAMEGGVEIPKLCATDMLD 65