BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0247.0035.p         (138 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CC1273 [J] COG0203 Ribosomal protein L17 Ccr Caulobacter vibrioides   213   1e-55
SMc01283 [J] COG0203 Ribosomal protein L17 Sme Sinorhizobium mel...   200   9e-52
BMEI0782 [J] COG0203 Ribosomal protein L17 Bme Brucella melitensis    196   9e-51
AGc3516 [J] COG0203 Ribosomal protein L17 Atu Agrobacterium tume...   194   4e-50
mlr0326 [J] COG0203 Ribosomal protein L17 Mlo Mesorhizobium loti      174   6e-44

>CC1273 [J] COG0203 Ribosomal protein L17 Ccr Caulobacter vibrioides
          Length = 137

 Score =  213 bits (541), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 103/136 (75%), Positives = 114/136 (83%)

Query: 1   MRHGKVHRKLNRTAEHRRAMFANMAAALIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGL 60
           MRHGK HRKL RT+ HR AMFANM+A+LIKHEQIVTTLPKAKELRPIVEKLVTL K+G L
Sbjct: 1   MRHGKAHRKLGRTSAHRTAMFANMSASLIKHEQIVTTLPKAKELRPIVEKLVTLAKRGDL 60

Query: 61  ALRRQAISELRDVDQVKKLFDTLATRYKDRQGGYTRIIKAGFRYGDNAAMAVIEFVDRDV 120
             RRQAIS +RDV+QV KLF  L  RYK+RQGGY R++KAGFRYGDNA MAVIEFVDRDV
Sbjct: 61  HARRQAISSVRDVEQVGKLFAVLGPRYKERQGGYIRVLKAGFRYGDNAPMAVIEFVDRDV 120

Query: 121 DAKGQDSGPAQDKEAE 136
             KG+DSGP    +AE
Sbjct: 121 SEKGKDSGPVYVNDAE 136


>SMc01283 [J] COG0203 Ribosomal protein L17 Sme Sinorhizobium meliloti
          Length = 141

 Score =  200 bits (508), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 97/125 (77%), Positives = 108/125 (86%)

Query: 1   MRHGKVHRKLNRTAEHRRAMFANMAAALIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGL 60
           MRHGK  RKLNRTA HR+AMFANMAA+LI+HEQIVTTLPKAKE+RPIVEKLVTLGK+G L
Sbjct: 1   MRHGKAGRKLNRTASHRKAMFANMAASLIEHEQIVTTLPKAKEIRPIVEKLVTLGKRGDL 60

Query: 61  ALRRQAISELRDVDQVKKLFDTLATRYKDRQGGYTRIIKAGFRYGDNAAMAVIEFVDRDV 120
             RRQAIS++RDV  V KLFD +A+RY  R GGY RI+KAGFR GDNA +AVIEFVDRDV
Sbjct: 61  HARRQAISQIRDVAVVSKLFDAIASRYATRNGGYLRIMKAGFRQGDNAPLAVIEFVDRDV 120

Query: 121 DAKGQ 125
           DAKG 
Sbjct: 121 DAKGS 125


>BMEI0782 [J] COG0203 Ribosomal protein L17 Bme Brucella melitensis
          Length = 142

 Score =  196 bits (499), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 96/125 (76%), Positives = 108/125 (86%)

Query: 1   MRHGKVHRKLNRTAEHRRAMFANMAAALIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGL 60
           MRHG  +RKLNRTA HR+AMFANMAA+LI+HEQIVTTLPKAKE+RPIVEKLVTLGK+G L
Sbjct: 1   MRHGNGYRKLNRTASHRKAMFANMAASLIEHEQIVTTLPKAKEIRPIVEKLVTLGKRGDL 60

Query: 61  ALRRQAISELRDVDQVKKLFDTLATRYKDRQGGYTRIIKAGFRYGDNAAMAVIEFVDRDV 120
             RRQAIS +RDV  V KLFDTLA RY  R GGY RI+KAGFR GDNA +AV+EFV+RDV
Sbjct: 61  HARRQAISAIRDVRLVAKLFDTLAARYATRNGGYIRIMKAGFRAGDNAPLAVVEFVERDV 120

Query: 121 DAKGQ 125
           DAKG+
Sbjct: 121 DAKGK 125


>AGc3516 [J] COG0203 Ribosomal protein L17 Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 141

 Score =  194 bits (493), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 92/124 (74%), Positives = 108/124 (87%)

Query: 1   MRHGKVHRKLNRTAEHRRAMFANMAAALIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGL 60
           MRHG   RKLNRTA HR+AMFANMAA+LI HEQIVTTLPKAKE+RPIVE+LVTLGK+G L
Sbjct: 1   MRHGNSGRKLNRTASHRKAMFANMAASLITHEQIVTTLPKAKEIRPIVERLVTLGKRGDL 60

Query: 61  ALRRQAISELRDVDQVKKLFDTLATRYKDRQGGYTRIIKAGFRYGDNAAMAVIEFVDRDV 120
             RRQAIS+++D D V+KLFD +A+RY  R GGY RI+KAG+R GDNAA+AV+EFV+RDV
Sbjct: 61  HARRQAISQIKDQDAVRKLFDAIASRYATRNGGYLRIMKAGYRQGDNAALAVVEFVERDV 120

Query: 121 DAKG 124
           DAKG
Sbjct: 121 DAKG 124


>mlr0326 [J] COG0203 Ribosomal protein L17 Mlo Mesorhizobium loti
          Length = 143

 Score =  174 bits (440), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 83/124 (66%), Positives = 102/124 (82%)

Query: 1   MRHGKVHRKLNRTAEHRRAMFANMAAALIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGL 60
           MRHG   R+  R+  HR++MFAN+A +L++HEQIVTTLPKAK+LRPIVEKLVTLGK+G L
Sbjct: 1   MRHGFKGRRFARSISHRKSMFANLAVSLLEHEQIVTTLPKAKDLRPIVEKLVTLGKRGDL 60

Query: 61  ALRRQAISELRDVDQVKKLFDTLATRYKDRQGGYTRIIKAGFRYGDNAAMAVIEFVDRDV 120
             RRQ I+++ +   VK+LFDT+A RY +R GGY RI+KAGFR+GDNAAMAVIEFVDRD 
Sbjct: 61  HARRQVIAQIGNEGVVKRLFDTIAPRYANRNGGYLRIMKAGFRHGDNAAMAVIEFVDRDT 120

Query: 121 DAKG 124
            AKG
Sbjct: 121 SAKG 124