BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0247.0032.p         (129 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BMEI0780 [J] COG0100 Ribosomal protein S11 Bme Brucella melitensis    236   9e-63
SMc01286 [J] COG0100 Ribosomal protein S11 Sme Sinorhizobium mel...   235   2e-62
CC1271 [J] COG0100 Ribosomal protein S11 Ccr Caulobacter vibrioides   224   4e-59
mlr0324 [J] COG0100 Ribosomal protein S11 Mlo Mesorhizobium loti      217   5e-57
AGc3519 [J] COG0100 Ribosomal protein S11 Atu Agrobacterium tume...   212   2e-55

>BMEI0780 [J] COG0100 Ribosomal protein S11 Bme Brucella melitensis
          Length = 129

 Score =  236 bits (602), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 111/129 (86%), Positives = 120/129 (93%)

Query: 1   MGKEATRVRRRERKNIASGIAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSRKSTP 60
           M KEATRVRRRERKNI+SG+AHVNS+FNNT ITITDAQGN IAWSSAG  GFKGSRKSTP
Sbjct: 1   MAKEATRVRRRERKNISSGVAHVNSTFNNTMITITDAQGNAIAWSSAGAQGFKGSRKSTP 60

Query: 61  YAAQVAAEDVSKKAQEHGMRTLEVEVAGPGSGRESALRALQAAGFTVTSIRDVTTIPHNG 120
           +AAQ+AAED +KKAQEHGMR+LEVEV GPGSGRESALRALQAAGF +TSIRDVT IPHNG
Sbjct: 61  FAAQIAAEDCAKKAQEHGMRSLEVEVCGPGSGRESALRALQAAGFVITSIRDVTPIPHNG 120

Query: 121 CRPRKRRRV 129
           CRPRK+RRV
Sbjct: 121 CRPRKKRRV 129


>SMc01286 [J] COG0100 Ribosomal protein S11 Sme Sinorhizobium meliloti
          Length = 129

 Score =  235 bits (599), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 111/129 (86%), Positives = 119/129 (92%)

Query: 1   MGKEATRVRRRERKNIASGIAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSRKSTP 60
           M KEATRVRRRERKNI SG+AHVNSSFNNT ITITDAQGN IAWSSAG  GFKGSRKSTP
Sbjct: 1   MAKEATRVRRRERKNITSGVAHVNSSFNNTMITITDAQGNAIAWSSAGAKGFKGSRKSTP 60

Query: 61  YAAQVAAEDVSKKAQEHGMRTLEVEVAGPGSGRESALRALQAAGFTVTSIRDVTTIPHNG 120
           +AAQ+AAED +KKAQEHGM++LEVEV GPGSGRESALRALQAAGF +TSIRDVT IPHNG
Sbjct: 61  FAAQIAAEDCAKKAQEHGMKSLEVEVCGPGSGRESALRALQAAGFMITSIRDVTPIPHNG 120

Query: 121 CRPRKRRRV 129
           CRPRK+RRV
Sbjct: 121 CRPRKKRRV 129


>CC1271 [J] COG0100 Ribosomal protein S11 Ccr Caulobacter vibrioides
          Length = 129

 Score =  224 bits (571), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 106/129 (82%), Positives = 116/129 (89%)

Query: 1   MGKEATRVRRRERKNIASGIAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSRKSTP 60
           M KE  RV+RRERKNI SG+AHVN+SFNNT ITITDAQGNTI+WSSAG MGFKGSRKSTP
Sbjct: 1   MAKEPARVKRRERKNITSGVAHVNASFNNTMITITDAQGNTISWSSAGMMGFKGSRKSTP 60

Query: 61  YAAQVAAEDVSKKAQEHGMRTLEVEVAGPGSGRESALRALQAAGFTVTSIRDVTTIPHNG 120
           YAAQ+AAED  KKA EHG++TLEV V+GPGSGRESALRALQAAG T+T+IRDVT IPHNG
Sbjct: 61  YAAQMAAEDAGKKAAEHGVKTLEVNVSGPGSGRESALRALQAAGMTITTIRDVTPIPHNG 120

Query: 121 CRPRKRRRV 129
           CRP KRRRV
Sbjct: 121 CRPPKRRRV 129


>mlr0324 [J] COG0100 Ribosomal protein S11 Mlo Mesorhizobium loti
          Length = 129

 Score =  217 bits (552), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 112/129 (86%), Positives = 121/129 (93%)

Query: 1   MGKEATRVRRRERKNIASGIAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSRKSTP 60
           M KEA RVRRRERKNI+SG+AHVNS+FNNT ITITDAQGN+IAWSSAG  GFKGSRKSTP
Sbjct: 1   MAKEAARVRRRERKNISSGVAHVNSTFNNTMITITDAQGNSIAWSSAGAQGFKGSRKSTP 60

Query: 61  YAAQVAAEDVSKKAQEHGMRTLEVEVAGPGSGRESALRALQAAGFTVTSIRDVTTIPHNG 120
           +AAQ+AAEDV+KKAQEHGMR LEVEV GPGSGRESALRALQAAGFT+TSIRDVT IPHNG
Sbjct: 61  FAAQMAAEDVAKKAQEHGMRMLEVEVCGPGSGRESALRALQAAGFTITSIRDVTPIPHNG 120

Query: 121 CRPRKRRRV 129
           CRPRK+RRV
Sbjct: 121 CRPRKKRRV 129


>AGc3519 [J] COG0100 Ribosomal protein S11 Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 129

 Score =  212 bits (540), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 109/129 (84%), Positives = 118/129 (91%)

Query: 1   MGKEATRVRRRERKNIASGIAHVNSSFNNTTITITDAQGNTIAWSSAGTMGFKGSRKSTP 60
           M KEA RVRRRERKNI SG+AHVNS+FNNT ITITDAQGN IAWSSAG  GFKGSRKSTP
Sbjct: 1   MAKEAARVRRRERKNITSGVAHVNSTFNNTMITITDAQGNAIAWSSAGAKGFKGSRKSTP 60

Query: 61  YAAQVAAEDVSKKAQEHGMRTLEVEVAGPGSGRESALRALQAAGFTVTSIRDVTTIPHNG 120
           +AAQ+AAED +KKAQEHGM++LEVEV GPGSGRESALRALQAAGF +TSIRDVT IPHNG
Sbjct: 61  FAAQIAAEDCAKKAQEHGMKSLEVEVCGPGSGRESALRALQAAGFMITSIRDVTPIPHNG 120

Query: 121 CRPRKRRRV 129
           CRPRK+RRV
Sbjct: 121 CRPRKKRRV 129