BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0247.0022.p         (101 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr0309 [J] COG0199 Ribosomal protein S14 Mlo Mesorhizobium loti      146   9e-36
SMc01296 [J] COG0199 Ribosomal protein S14 Sme Sinorhizobium mel...   135   3e-32
BMEI0770 [J] COG0199 Ribosomal protein S14 Bme Brucella melitensis    133   9e-32
AGc3535 [J] COG0199 Ribosomal protein S14 Atu Agrobacterium tume...   130   1e-30
CC1261 [J] COG0199 Ribosomal protein S14 Ccr Caulobacter vibrioides   129   2e-30

>mlr0309 [J] COG0199 Ribosomal protein S14 Mlo Mesorhizobium loti
          Length = 101

 Score =  146 bits (369), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 71/101 (70%), Positives = 85/101 (84%)

Query: 1   MAKKSSVEKNNRRKRMAKNAGPRREKLKAIIADKTKPMEERFAATLKLAEMPRNSSPTRI 60
           MAK SSVEKNNRR+++A   GP+R  LKAII D++KPMEERF A LKLA +PRNS+  RI
Sbjct: 1   MAKTSSVEKNNRRRKLADQYGPKRAALKAIIMDQSKPMEERFRAQLKLAALPRNSAKIRI 60

Query: 61  RNRCELTGRPRSNYRKNKLSRIALRELGSKGLVPGLVKSSW 101
           RNRCE+TGRPR+ YRK K+SRIALR+LG+ G +PGLVKSSW
Sbjct: 61  RNRCEVTGRPRAYYRKLKVSRIALRDLGNNGQIPGLVKSSW 101


>SMc01296 [J] COG0199 Ribosomal protein S14 Sme Sinorhizobium meliloti
          Length = 101

 Score =  135 bits (339), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 66/101 (65%), Positives = 83/101 (82%)

Query: 1   MAKKSSVEKNNRRKRMAKNAGPRREKLKAIIADKTKPMEERFAATLKLAEMPRNSSPTRI 60
           MAK S+VEKN RR+++  N   +R  LKAII +++ P+EERF ATLKLAE+PR+ S TRI
Sbjct: 1   MAKTSAVEKNKRRRKLVANHAAKRAVLKAIIMNQSLPIEERFKATLKLAELPRDGSKTRI 60

Query: 61  RNRCELTGRPRSNYRKNKLSRIALRELGSKGLVPGLVKSSW 101
           RNRCE+TGRPR+ YRK ++SRIALRELG+ G VPG+VKSSW
Sbjct: 61  RNRCEVTGRPRAYYRKLRMSRIALRELGNLGKVPGVVKSSW 101


>BMEI0770 [J] COG0199 Ribosomal protein S14 Bme Brucella melitensis
          Length = 101

 Score =  133 bits (335), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 63/101 (62%), Positives = 82/101 (81%)

Query: 1   MAKKSSVEKNNRRKRMAKNAGPRREKLKAIIADKTKPMEERFAATLKLAEMPRNSSPTRI 60
           MAK S+VEKN RR+++ K    +R +LKAI+ D+  P+EERF AT++LAE+PRNS+  RI
Sbjct: 1   MAKTSAVEKNKRREKLVKRHAVKRARLKAIVMDQGLPLEERFRATIRLAELPRNSAKVRI 60

Query: 61  RNRCELTGRPRSNYRKNKLSRIALRELGSKGLVPGLVKSSW 101
           RNRCE++GRPR  YRK K+SRIALR+LGS G +PG+VKSSW
Sbjct: 61  RNRCEVSGRPRGYYRKLKMSRIALRQLGSLGQIPGVVKSSW 101


>AGc3535 [J] COG0199 Ribosomal protein S14 Atu Agrobacterium tumefaciens
           strain C58 (Cereon)
          Length = 101

 Score =  130 bits (326), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 63/101 (62%), Positives = 80/101 (79%)

Query: 1   MAKKSSVEKNNRRKRMAKNAGPRREKLKAIIADKTKPMEERFAATLKLAEMPRNSSPTRI 60
           MAK S+VEKN RR++       +R  LKAI+ +++ P+E+RF ATLKLA +PR+ S TRI
Sbjct: 1   MAKTSAVEKNKRRRKSVAQQATKRAALKAIVMNQSLPIEDRFKATLKLASLPRDGSKTRI 60

Query: 61  RNRCELTGRPRSNYRKNKLSRIALRELGSKGLVPGLVKSSW 101
           RNRCE+TGRPR+ YRK K+SRIALRELG+ G VPG+VKSSW
Sbjct: 61  RNRCEVTGRPRAFYRKLKMSRIALRELGNSGKVPGIVKSSW 101


>CC1261 [J] COG0199 Ribosomal protein S14 Ccr Caulobacter vibrioides
          Length = 101

 Score =  129 bits (324), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 64/101 (63%), Positives = 79/101 (78%)

Query: 1   MAKKSSVEKNNRRKRMAKNAGPRREKLKAIIADKTKPMEERFAATLKLAEMPRNSSPTRI 60
           MAKKS+V +N   K + K    +R  LKAI  D+T P+EERF A LKLA++PRNS+  RI
Sbjct: 1   MAKKSAVNRNEAVKALVKKFAEKRAALKAIANDETLPLEERFEARLKLAKLPRNSAAIRI 60

Query: 61  RNRCELTGRPRSNYRKNKLSRIALRELGSKGLVPGLVKSSW 101
           RNRCE+TGRPR+ YRK K+SR+ALRELGS+G +PGLVKSSW
Sbjct: 61  RNRCEVTGRPRAYYRKLKMSRVALRELGSQGQIPGLVKSSW 101