BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0247.0018.p         (74 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc01300 [J] COG0186 Ribosomal protein S17 Sme Sinorhizobium mel...   102   2e-22
BMEI0766 [J] COG0186 Ribosomal protein S17 Bme Brucella melitensis     96   2e-20
msr0304 [J] COG0186 Ribosomal protein S17 Mlo Mesorhizobium loti       94   9e-20
TM1491 [J] COG0186 Ribosomal protein S17 Tma Thermotoga maritima       87   1e-17
aq_020 [J] COG0186 Ribosomal protein S17 Aae Aquifex aeolicus          86   2e-17

>SMc01300 [J] COG0186 Ribosomal protein S17 Sme Sinorhizobium meliloti
          Length = 78

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/68 (72%), Positives = 55/68 (80%)

Query: 2  VVSDKQAKTIVVRVDRRFTHPIYKKTIRRSKNYHAHDENNQFKPGDMVWIEESKPISKLK 61
          VVSDK  KT+VVRV+RRF HPI +KT+RRSK Y AHDENNQFK GD+V IEE  PISK K
Sbjct: 10 VVSDKNDKTVVVRVERRFAHPILQKTVRRSKKYKAHDENNQFKVGDLVSIEECAPISKDK 69

Query: 62 RWTVVRGE 69
          RWTVV  +
Sbjct: 70 RWTVVSAQ 77


>BMEI0766 [J] COG0186 Ribosomal protein S17 Bme Brucella melitensis
          Length = 80

 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 56/69 (81%)

Query: 1  VVVSDKQAKTIVVRVDRRFTHPIYKKTIRRSKNYHAHDENNQFKPGDMVWIEESKPISKL 60
          VVVSDK  KT+VV+V+RR++HP+ +KT+R+SK Y AHDENNQFK GD V I+ES PISK 
Sbjct: 9  VVVSDKNDKTVVVKVERRYSHPLLQKTVRQSKKYKAHDENNQFKVGDFVSIQESAPISKD 68

Query: 61 KRWTVVRGE 69
          KRW V+  E
Sbjct: 69 KRWVVLTSE 77


>msr0304 [J] COG0186 Ribosomal protein S17 Mlo Mesorhizobium loti
          Length = 79

 Score = 93.6 bits (231), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 54/69 (78%)

Query: 2  VVSDKQAKTIVVRVDRRFTHPIYKKTIRRSKNYHAHDENNQFKPGDMVWIEESKPISKLK 61
          VVSDK  KT+VV+V+RRFTHP+ KKT+R +K Y AHDENN  K GD V+I+ESKPISK K
Sbjct: 10 VVSDKNEKTVVVKVERRFTHPVMKKTVRMTKKYKAHDENNAHKVGDQVFIQESKPISKDK 69

Query: 62 RWTVVRGEH 70
          RW VV  + 
Sbjct: 70 RWIVVSSDQ 78


>TM1491 [J] COG0186 Ribosomal protein S17 Tma Thermotoga maritima
          Length = 107

 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 40/67 (59%), Positives = 53/67 (79%)

Query: 1  VVVSDKQAKTIVVRVDRRFTHPIYKKTIRRSKNYHAHDENNQFKPGDMVWIEESKPISKL 60
          +VVSDK  KT+VV V++   HP+YKK ++R+K YHAHDE N+ K GD+V IEE++P+SK 
Sbjct: 9  IVVSDKMDKTVVVAVEKLVQHPLYKKYVKRTKKYHAHDERNECKIGDVVEIEETRPLSKT 68

Query: 61 KRWTVVR 67
          KRW VVR
Sbjct: 69 KRWRVVR 75


>aq_020 [J] COG0186 Ribosomal protein S17 Aae Aquifex aeolicus
          Length = 107

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/67 (61%), Positives = 53/67 (79%)

Query: 1  VVVSDKQAKTIVVRVDRRFTHPIYKKTIRRSKNYHAHDENNQFKPGDMVWIEESKPISKL 60
          VVVSDK  KT+VV+VDR+  HPIY K I +SK YHAHDE+N+ + GD+V I E++P+SK 
Sbjct: 20 VVVSDKMDKTVVVKVDRKVPHPIYGKHIIKSKKYHAHDEHNECRVGDIVMIRETRPLSKT 79

Query: 61 KRWTVVR 67
          KRW VV+
Sbjct: 80 KRWVVVK 86