BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0247.0009.p         (102 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SMc01310 [J] COG0051 Ribosomal protein S10 Sme Sinorhizobium mel...   201   3e-52
mlr0289 [J] COG0051 Ribosomal protein S10 Mlo Mesorhizobium loti      199   1e-51
BMEI0756 [J] COG0051 Ribosomal protein S10 Bme Brucella melitensis    199   1e-51
CC1247 [J] COG0051 Ribosomal protein S10 Ccr Caulobacter vibrioides   189   2e-48
HI0776 [J] COG0051 Ribosomal protein S10 Hin Haemophilus influenzae   159   1e-39

>SMc01310 [J] COG0051 Ribosomal protein S10 Sme Sinorhizobium meliloti
          Length = 102

 Score =  201 bits (511), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 98/102 (96%), Positives = 100/102 (98%)

Query: 1   MNGQNIRIRLKAFDHRILDTSTREIVNTAKRTGAQVRGPIPLPTRIEKFTVNRSPHVDKK 60
           MNGQNIRIRLKAFDHRILD STREIV+TAKRTGA VRGP+PLPTRIEKFTVNRSPHVDKK
Sbjct: 1   MNGQNIRIRLKAFDHRILDASTREIVSTAKRTGASVRGPVPLPTRIEKFTVNRSPHVDKK 60

Query: 61  SREQFEMRTHKRLLDIVDPTPQTVDALMKLDLAAGVDVEIKL 102
           SREQFEMRTHKRLLDIVDPTPQTVDALMKLDLAAGVDVEIKL
Sbjct: 61  SREQFEMRTHKRLLDIVDPTPQTVDALMKLDLAAGVDVEIKL 102


>mlr0289 [J] COG0051 Ribosomal protein S10 Mlo Mesorhizobium loti
          Length = 102

 Score =  199 bits (507), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 97/102 (95%), Positives = 100/102 (98%)

Query: 1   MNGQNIRIRLKAFDHRILDTSTREIVNTAKRTGAQVRGPIPLPTRIEKFTVNRSPHVDKK 60
           MNGQNIRIRLKAFDHR+LD ST+EIV+TAKRTGA VRGPIPLPTRIEKFTVNRSPHVDKK
Sbjct: 1   MNGQNIRIRLKAFDHRVLDASTKEIVSTAKRTGANVRGPIPLPTRIEKFTVNRSPHVDKK 60

Query: 61  SREQFEMRTHKRLLDIVDPTPQTVDALMKLDLAAGVDVEIKL 102
           SREQFEMRTHKRLLDIVDPTPQTVDALMKLDLAAGVDVEIKL
Sbjct: 61  SREQFEMRTHKRLLDIVDPTPQTVDALMKLDLAAGVDVEIKL 102


>BMEI0756 [J] COG0051 Ribosomal protein S10 Bme Brucella melitensis
          Length = 102

 Score =  199 bits (507), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 97/102 (95%), Positives = 100/102 (98%)

Query: 1   MNGQNIRIRLKAFDHRILDTSTREIVNTAKRTGAQVRGPIPLPTRIEKFTVNRSPHVDKK 60
           MNGQNIRIRLKAFDHRILD STREIV+TAKRTGA VRGPIPLPTRIEKFTVNRSPH+DKK
Sbjct: 1   MNGQNIRIRLKAFDHRILDASTREIVSTAKRTGANVRGPIPLPTRIEKFTVNRSPHIDKK 60

Query: 61  SREQFEMRTHKRLLDIVDPTPQTVDALMKLDLAAGVDVEIKL 102
           SREQFEMRTHKRLLDIVDPTPQTVDALMKLDL+AGVDVEIKL
Sbjct: 61  SREQFEMRTHKRLLDIVDPTPQTVDALMKLDLSAGVDVEIKL 102


>CC1247 [J] COG0051 Ribosomal protein S10 Ccr Caulobacter vibrioides
          Length = 102

 Score =  189 bits (479), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 93/102 (91%), Positives = 98/102 (96%)

Query: 1   MNGQNIRIRLKAFDHRILDTSTREIVNTAKRTGAQVRGPIPLPTRIEKFTVNRSPHVDKK 60
           M+ QNIRIRLKAFDHR+LD STREIVNTAKRTGA VRGPIPLPT IEKFTVNRSPHVDKK
Sbjct: 1   MDRQNIRIRLKAFDHRVLDHSTREIVNTAKRTGATVRGPIPLPTLIEKFTVNRSPHVDKK 60

Query: 61  SREQFEMRTHKRLLDIVDPTPQTVDALMKLDLAAGVDVEIKL 102
           SREQFE+RTHKR+LDIVDPTPQTVDALMKLDL+AGVDVEIKL
Sbjct: 61  SREQFEIRTHKRVLDIVDPTPQTVDALMKLDLSAGVDVEIKL 102


>HI0776 [J] COG0051 Ribosomal protein S10 Hin Haemophilus influenzae
          Length = 118

 Score =  159 bits (402), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 77/102 (75%), Positives = 90/102 (88%)

Query: 1   MNGQNIRIRLKAFDHRILDTSTREIVNTAKRTGAQVRGPIPLPTRIEKFTVNRSPHVDKK 60
           M  Q IRIRLKAFDHR++D ST EIV TAKRTGAQVRGPIPLPTR E+FTV  SPHV+K 
Sbjct: 16  MQNQRIRIRLKAFDHRLIDQSTAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKD 75

Query: 61  SREQFEMRTHKRLLDIVDPTPQTVDALMKLDLAAGVDVEIKL 102
           +R+Q+E+RTHKRL+DIV+PT +TVDALM+LDLAAGVDV+I L
Sbjct: 76  ARDQYEIRTHKRLVDIVEPTEKTVDALMRLDLAAGVDVQISL 117