BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0246.0006.p (892 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value RSc1545 [T] COG5001 Predicted signal transduction protein contai... 345 3e-94 CC3094_4 [T] COG2200 FOG Ccr Caulobacter vibrioides 286 2e-76 SMa1548_3 [T] COG2200 FOG Sme Sinorhizobium meliloti 283 2e-75 AGl2664_2 [T] COG2200 FOG Atu Agrobacterium tumefaciens strain C... 277 1e-73 CC0740_2 [T] COG2200 FOG Ccr Caulobacter vibrioides 270 1e-71 >RSc1545 [T] COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain Rso Ralstonia solanacearum Length = 776 Score = 345 bits (885), Expect = 3e-94, Method: Compositional matrix adjust. Identities = 211/462 (45%), Positives = 278/462 (60%), Gaps = 12/462 (2%) Query: 429 MTPDGRSIRLIYKRAPDG---GWATTLEDVTDGRRAQARIEYLAHYDALTNLPNRTLFQR 485 + P+ +++ RA DG G T VT A+ RI LAHYD LT L NRT F+ Sbjct: 299 LGPEVLDLKVSAVRANDGSYIGPMLTWALVTKEVEAENRIRQLAHYDTLTGLANRTNFRE 358 Query: 486 HAEGLLLEAATREFAIHYIDIDEFKRINDTLGHLIGDEFLRRVAEKLRQSVGSNDF-IAR 544 + L R + YID+D FK +NDT GH GD L RVA++LR IAR Sbjct: 359 QLDARLAAPEAR-LGLLYIDLDGFKLVNDTKGHRAGDALLERVAQRLRAVCDRPGMAIAR 417 Query: 545 LGGDEFAI-VQHDITSDDDVGDLVARIYQSLRTPFDCLG--HHLSSDASIGIAIAPRHGS 601 LGGDEFA+ V HD D L + ++L P+ LG ++ ASIGIA+AP HG Sbjct: 418 LGGDEFAVLVPHD--DADRAATLATALIEALGAPY-ALGADQNVRIGASIGIALAPAHGR 474 Query: 602 DLFRLLKCADLAMYAAKAAGRRTHRFFDPAMEAQANLRRALEADLRTALA-EGGFELHYQ 660 D LL AD+A+YAAKAAG+ R F ME + R LEA LR AL + + YQ Sbjct: 475 DTENLLARADIALYAAKAAGKGLARLFCADMETRIQARALLEAQLRAALEHQDRLFVFYQ 534 Query: 661 PLVDLRSDEVTGCEALLRWRHPMRGMISPAEFIPVAEETGLIEEIGQWVLHTACTEAAAW 720 P+VD+ + +VT EAL+RW H RG + P EF+P+AE++GLI+++G++VLH AC EA W Sbjct: 535 PIVDVATGKVTAREALVRWHHAERGWVPPDEFVPIAEQSGLIDQLGRFVLHRACREATRW 594 Query: 721 PAHVRVAVNVSPIQFKSETLALKVAHALAESGLDPRRLELEITEAVLIADDDAALVTLGQ 780 RVAVNVSP+Q TLA V AL +SGL P RLE+E+TE LI ++ + L Q Sbjct: 595 EDGARVAVNVSPMQLGKATLAQTVHAALIDSGLAPDRLEIEVTETALIQNEAESFEDLRQ 654 Query: 781 LRALGVHIALDDFGTGYSSLQYLQRFPFDKIKIDRSFVKEVTRNSGSASIIRAVVSIAAD 840 L +GV +ALDDFGTGYSSL +L+ FPFDKIKIDRSFV+++ SA ++RA+ + Sbjct: 655 LYDMGVRVALDDFGTGYSSLAHLRAFPFDKIKIDRSFVRDLLERPDSAVLVRAIADLGRQ 714 Query: 841 RNMITTAEGVETDQQRDTVQMLGCTQMQGYLFSRPVPARDLR 882 + T AEGVET ++ GCT+ QGY + RP P+ + R Sbjct: 715 LGVTTVAEGVETQAHVRGIREAGCTEAQGYYYGRPAPSDEDR 756 >CC3094_4 [T] COG2200 FOG Ccr Caulobacter vibrioides Length = 283 Score = 286 bits (732), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 134/234 (57%), Positives = 173/234 (73%) Query: 655 FELHYQPLVDLRSDEVTGCEALLRWRHPMRGMISPAEFIPVAEETGLIEEIGQWVLHTAC 714 FEL YQPL L + VTGCEALLRWRHP RGM+SPA+FIP+AEE GLI ++G+WVL AC Sbjct: 2 FELFYQPLYHLGDERVTGCEALLRWRHPERGMVSPADFIPLAEEIGLIVQLGEWVLRRAC 61 Query: 715 TEAAAWPAHVRVAVNVSPIQFKSETLALKVAHALAESGLDPRRLELEITEAVLIADDDAA 774 EAA WP HVR+AVN+SP QF+ L V ALA SGL +RLELEITE+VL+ D A Sbjct: 62 AEAANWPEHVRLAVNLSPAQFRDRGLVRTVVSALAASGLPAQRLELEITESVLLQDSQAN 121 Query: 775 LVTLGQLRALGVHIALDDFGTGYSSLQYLQRFPFDKIKIDRSFVKEVTRNSGSASIIRAV 834 + L L+ALGV I++DDFGTGYSSL YL+ FPFDKIKID++FV+++ +S + +II+AV Sbjct: 122 MTMLHDLKALGVRISMDDFGTGYSSLSYLRSFPFDKIKIDQTFVRDILHDSDAMAIIKAV 181 Query: 835 VSIAADRNMITTAEGVETDQQRDTVQMLGCTQMQGYLFSRPVPARDLRTLLAAD 888 + + A ++TTAEGVET Q D ++ GC ++QGY SRP PA ++ +L + Sbjct: 182 LDLGASMGVVTTAEGVETQAQLDALRQQGCAEIQGYFISRPAPASEIAKMLGVE 235 >SMa1548_3 [T] COG2200 FOG Sme Sinorhizobium meliloti Length = 253 Score = 283 bits (723), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 138/246 (56%), Positives = 177/246 (71%) Query: 642 LEADLRTALAEGGFELHYQPLVDLRSDEVTGCEALLRWRHPMRGMISPAEFIPVAEETGL 701 ++ +R ALA+G FELHYQPLV L S V+ CEALLRWRHP RGMI+P+EFIP+AEETGL Sbjct: 5 MKITMRDALAKGEFELHYQPLVSLESRCVSCCEALLRWRHPERGMIAPSEFIPIAEETGL 64 Query: 702 IEEIGQWVLHTACTEAAAWPAHVRVAVNVSPIQFKSETLALKVAHALAESGLDPRRLELE 761 I IG+W+L AC +AA WP V VAVN+SP+QFK L VA AL+ + LDP RL+LE Sbjct: 65 IVPIGEWILGEACRQAARWPERVSVAVNLSPVQFKHRNLVRAVAKALSATRLDPARLQLE 124 Query: 762 ITEAVLIADDDAALVTLGQLRALGVHIALDDFGTGYSSLQYLQRFPFDKIKIDRSFVKEV 821 ITE VL+ + + L L LR LGV IA+DDFGTGYSSL YL+ FPFDKIK+D++FV+++ Sbjct: 125 ITETVLLDESEHNLELLQDLRRLGVKIAMDDFGTGYSSLGYLRSFPFDKIKVDQAFVRDL 184 Query: 822 TRNSGSASIIRAVVSIAADRNMITTAEGVETDQQRDTVQMLGCTQMQGYLFSRPVPARDL 881 S +I++AV + M T+ EGVET+ Q V G ++QGYLFSRP+PA ++ Sbjct: 185 PHGKESLAIVKAVAGLGQSLGMTTSVEGVETEDQLAVVDSEGFNEVQGYLFSRPLPAAEI 244 Query: 882 RTLLAA 887 L+AA Sbjct: 245 SKLIAA 250 >AGl2664_2 [T] COG2200 FOG Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 262 Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust. Identities = 129/254 (50%), Positives = 181/254 (71%) Query: 628 FDPAMEAQANLRRALEADLRTALAEGGFELHYQPLVDLRSDEVTGCEALLRWRHPMRGMI 687 F M+ Q +++ EADL+TAL E++YQP V ++ ++ G EALLRW+HP+RG + Sbjct: 3 FKVRMQKQLTEKKSFEADLQTALQNDEMEVYYQPQVATQTRKLCGFEALLRWKHPVRGDV 62 Query: 688 SPAEFIPVAEETGLIEEIGQWVLHTACTEAAAWPAHVRVAVNVSPIQFKSETLALKVAHA 747 P+ FIPVAE TGLI +G+WV+ TAC EA W ++VAVN+SP+QF S L V A Sbjct: 63 PPSVFIPVAERTGLIHSLGKWVMETACREAMGWDEDMKVAVNLSPVQFHSTNLIQNVMGA 122 Query: 748 LAESGLDPRRLELEITEAVLIADDDAALVTLGQLRALGVHIALDDFGTGYSSLQYLQRFP 807 L +SGL+P RLELEITE++L+ D + TL +L+A+G+ IA+DDFGTGYSSL L+ P Sbjct: 123 LEKSGLEPSRLELEITESILLNKSDQTINTLSRLKAVGIKIAMDDFGTGYSSLANLRGVP 182 Query: 808 FDKIKIDRSFVKEVTRNSGSASIIRAVVSIAADRNMITTAEGVETDQQRDTVQMLGCTQM 867 FDKIKIDRSF++++T + + +I+ VV + M T AEG+ET++Q + V+ LGC Q+ Sbjct: 183 FDKIKIDRSFLRDITSDRDALAIVEFVVGVGRSLRMTTIAEGIETEEQYECVRRLGCDQV 242 Query: 868 QGYLFSRPVPARDL 881 QGYL SRP+PA++L Sbjct: 243 QGYLISRPLPAKEL 256 >CC0740_2 [T] COG2200 FOG Ccr Caulobacter vibrioides Length = 276 Score = 270 bits (690), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 137/249 (55%), Positives = 168/249 (67%) Query: 639 RRALEADLRTALAEGGFELHYQPLVDLRSDEVTGCEALLRWRHPMRGMISPAEFIPVAEE 698 RRALE DLR ALA +L +QPL+ R +E TG EALLRW+HP RG++ P++FI AE+ Sbjct: 3 RRALEMDLREALARDELKLFFQPLIGRRDNETTGFEALLRWQHPTRGLVPPSDFIECAEQ 62 Query: 699 TGLIEEIGQWVLHTACTEAAAWPAHVRVAVNVSPIQFKSETLALKVAHALAESGLDPRRL 758 GLI IG+WVL+ AC AA WP+H+ VAVN+SP QF S L +V AL SGL P RL Sbjct: 63 WGLIGRIGEWVLNEACRTAATWPSHLTVAVNLSPNQFASGDLVDQVRAALKASGLAPARL 122 Query: 759 ELEITEAVLIADDDAALVTLGQLRALGVHIALDDFGTGYSSLQYLQRFPFDKIKIDRSFV 818 ELEITE +L+ D L L L+ALGV IA+DDFGTGYSSL YL RFPFDKIKIDRSFV Sbjct: 123 ELEITEGLLLHDSAKTLEQLAALKALGVKIAMDDFGTGYSSLAYLWRFPFDKIKIDRSFV 182 Query: 819 KEVTRNSGSASIIRAVVSIAADRNMITTAEGVETDQQRDTVQMLGCTQMQGYLFSRPVPA 878 E+ N A I+R + + N+ TAEGVET Q + + C Q QG+LF RP+P Sbjct: 183 AEMQDNVAIADILRTIALLGQTLNLEVTAEGVETQAQARLLAEMRCDQFQGFLFGRPMPV 242 Query: 879 RDLRTLLAA 887 D+ + L A Sbjct: 243 GDIPSFLMA 251