BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0245.0021.p (259 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AGc562 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Atu A... 347 1e-95 mll5584 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Mlo ... 344 1e-94 Rv1070c [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Mtu ... 339 3e-93 MT1100 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase MtC M... 339 3e-93 SMc01153 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Sme... 338 5e-93 >AGc562 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 288 Score = 347 bits (891), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 174/256 (67%), Positives = 205/256 (80%), Gaps = 1/256 (0%) Query: 4 FEFIIVESKGPVGVITLNRPKMLNALSFGVFREIAAAVDDLEADDKIGCILITGSEKAFA 63 +E I+VE + VGVITLNRPK+LNAL+ + +E+ + ADD IG I+ITGSEKAFA Sbjct: 34 YEMILVEKRDEVGVITLNRPKVLNALNSVLLKELRHILSSFSADDSIGAIIITGSEKAFA 93 Query: 64 AGADIKEMQPKGFIDMFNSDFTAIGGDRVARCRKPTIAAVAGYALGGGCELAMMCDIIIA 123 AGADIKEMQ F+D + DF G D VA RKP IAAV+G+ALGGGCELAMMCD IIA Sbjct: 94 AGADIKEMQGLDFVDAYVGDFLG-GWDEVAATRKPVIAAVSGFALGGGCELAMMCDFIIA 152 Query: 124 ADTAKFGQPEITLGTIPGIGGTQRLTRAIGKSKAMDLCLTGRMMDAAEAERSGLVSRIVP 183 +DTAKFGQPEITLG IPG+GG+QRLTRA+GK+KAMDL LTGRMMDAAEAER+GLVSRIVP Sbjct: 153 SDTAKFGQPEITLGVIPGMGGSQRLTRAVGKAKAMDLVLTGRMMDAAEAERAGLVSRIVP 212 Query: 184 ADKLLEEALAAAEKIASMSRPAVAMAKEAVNRAFETPLAEGMNVERNLFHSTFALEDRSE 243 A L+E A+ AA +IAS+SR +V MAKE+VNR+FE PLAEG+ ER F S FA ED+ E Sbjct: 213 AADLMEVAVEAATRIASLSRASVLMAKESVNRSFEVPLAEGLRYERRAFQSLFATEDQKE 272 Query: 244 GMAAFIEKRKPVNKNR 259 GMAAF+EKRKP +NR Sbjct: 273 GMAAFVEKRKPAFRNR 288 >mll5584 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Mlo Mesorhizobium loti Length = 257 Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 177/256 (69%), Positives = 206/256 (80%), Gaps = 1/256 (0%) Query: 4 FEFIIVESKGPVGVITLNRPKMLNALSFGVFREIAAAVDDLEADDKIGCILITGSEKAFA 63 +E II E++G VG++TLNRPK LNAL+ + E+ AAV D +AD IG ++ITGS+KAFA Sbjct: 3 YETIITETRGKVGLVTLNRPKALNALNLQLLAELVAAVKDFDADAGIGAVVITGSDKAFA 62 Query: 64 AGADIKEMQPKGFIDMFNSDFTAIGGDRVARCRKPTIAAVAGYALGGGCELAMMCDIIIA 123 AGADIKEMQ F D + D +G + + R RKP IAAVAGYALGGGCELAMMCD IIA Sbjct: 63 AGADIKEMQAISFADAYLQDLF-VGWEDLTRVRKPVIAAVAGYALGGGCELAMMCDFIIA 121 Query: 124 ADTAKFGQPEITLGTIPGIGGTQRLTRAIGKSKAMDLCLTGRMMDAAEAERSGLVSRIVP 183 ADTAKFGQPEITLG IPG+GG+QRLTR +GKSKAMD+CLTGRMMDAAEAERSGLVSR+VP Sbjct: 122 ADTAKFGQPEITLGVIPGMGGSQRLTRFVGKSKAMDMCLTGRMMDAAEAERSGLVSRVVP 181 Query: 184 ADKLLEEALAAAEKIASMSRPAVAMAKEAVNRAFETPLAEGMNVERNLFHSTFALEDRSE 243 A +L+EEA+ AA KIA S P+V MAKEAVNR++ET L EG+ ER LFHS FALED+ E Sbjct: 182 AAELVEEAVKAAAKIADFSLPSVMMAKEAVNRSYETTLTEGLRFERRLFHSLFALEDQKE 241 Query: 244 GMAAFIEKRKPVNKNR 259 GMAAF EKRKP NR Sbjct: 242 GMAAFAEKRKPNFANR 257 >Rv1070c [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Mtu Mycobacterium tuberculosis H37Rv Length = 257 Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 174/257 (67%), Positives = 200/257 (77%), Gaps = 1/257 (0%) Query: 3 TFEFIIVESKGPVGVITLNRPKMLNALSFGVFREIAAAVDDLEADDKIGCILITGSEKAF 62 T+E I+VE VG+ITLNRP+ LNAL+ V E+ +A +L+ D IG I+ITGS KAF Sbjct: 2 TYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAF 61 Query: 63 AAGADIKEMQPKGFIDMFNSDFTAIGGDRVARCRKPTIAAVAGYALGGGCELAMMCDIII 122 AAGADIKEM F D F +DF A G ++A R PTIAAVAGYALGGGCELAMMCD++I Sbjct: 62 AAGADIKEMADLTFADAFTADFFATWG-KLAAVRTPTIAAVAGYALGGGCELAMMCDVLI 120 Query: 123 AADTAKFGQPEITLGTIPGIGGTQRLTRAIGKSKAMDLCLTGRMMDAAEAERSGLVSRIV 182 AADTAKFGQPEI LG +PG+GG+QRLTRAIGK+KAMDL LTGR MDAAEAERSGLVSR+V Sbjct: 121 AADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVV 180 Query: 183 PADKLLEEALAAAEKIASMSRPAVAMAKEAVNRAFETPLAEGMNVERNLFHSTFALEDRS 242 PAD LL EA A A I+ MS A MAKEAVNRAFE+ L+EG+ ER LFHS FA ED+S Sbjct: 181 PADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQS 240 Query: 243 EGMAAFIEKRKPVNKNR 259 EGMAAFIEKR P +R Sbjct: 241 EGMAAFIEKRAPQFTHR 257 >MT1100 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase MtC Mycobacterium tuberculosis CDC1551 Length = 257 Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 174/257 (67%), Positives = 200/257 (77%), Gaps = 1/257 (0%) Query: 3 TFEFIIVESKGPVGVITLNRPKMLNALSFGVFREIAAAVDDLEADDKIGCILITGSEKAF 62 T+E I+VE VG+ITLNRP+ LNAL+ V E+ +A +L+ D IG I+ITGS KAF Sbjct: 2 TYETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAF 61 Query: 63 AAGADIKEMQPKGFIDMFNSDFTAIGGDRVARCRKPTIAAVAGYALGGGCELAMMCDIII 122 AAGADIKEM F D F +DF A G ++A R PTIAAVAGYALGGGCELAMMCD++I Sbjct: 62 AAGADIKEMADLTFADAFTADFFATWG-KLAAVRTPTIAAVAGYALGGGCELAMMCDVLI 120 Query: 123 AADTAKFGQPEITLGTIPGIGGTQRLTRAIGKSKAMDLCLTGRMMDAAEAERSGLVSRIV 182 AADTAKFGQPEI LG +PG+GG+QRLTRAIGK+KAMDL LTGR MDAAEAERSGLVSR+V Sbjct: 121 AADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVV 180 Query: 183 PADKLLEEALAAAEKIASMSRPAVAMAKEAVNRAFETPLAEGMNVERNLFHSTFALEDRS 242 PAD LL EA A A I+ MS A MAKEAVNRAFE+ L+EG+ ER LFHS FA ED+S Sbjct: 181 PADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQS 240 Query: 243 EGMAAFIEKRKPVNKNR 259 EGMAAFIEKR P +R Sbjct: 241 EGMAAFIEKRAPQFTHR 257 >SMc01153 [I] COG1024 Enoyl-CoA hydratase/carnithine racemase Sme Sinorhizobium meliloti Length = 257 Score = 338 bits (868), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 171/257 (66%), Positives = 206/257 (80%), Gaps = 1/257 (0%) Query: 3 TFEFIIVESKGPVGVITLNRPKMLNALSFGVFREIAAAVDDLEADDKIGCILITGSEKAF 62 ++E ++VE++G VG+ITLNRP+ LNAL+ + RE+ AA+ +AD +G I++ GSEKAF Sbjct: 2 SYETLLVETQGRVGLITLNRPQALNALNAVLMRELDAALKAFDADRAVGAIVLAGSEKAF 61 Query: 63 AAGADIKEMQPKGFIDMFNSDFTAIGGDRVARCRKPTIAAVAGYALGGGCELAMMCDIII 122 AAGADIKEMQ F+D + +DF G + VA RKP IAAV+G+ALGGGCELAMMCD II Sbjct: 62 AAGADIKEMQGLDFVDGYLADFLG-GWEHVANARKPMIAAVSGFALGGGCELAMMCDFII 120 Query: 123 AADTAKFGQPEITLGTIPGIGGTQRLTRAIGKSKAMDLCLTGRMMDAAEAERSGLVSRIV 182 A++TAKFGQPEITLG IPG+GG+QRLTRA+GK+KAMDL LTGRMMDAAEAERSGLVSR+V Sbjct: 121 ASETAKFGQPEITLGVIPGMGGSQRLTRAVGKAKAMDLILTGRMMDAAEAERSGLVSRVV 180 Query: 183 PADKLLEEALAAAEKIASMSRPAVAMAKEAVNRAFETPLAEGMNVERNLFHSTFALEDRS 242 D+LLEEAL AAEKIAS S PA MAKEAVNR+ E LAEG+ ER LF S FA ED+ Sbjct: 181 APDRLLEEALGAAEKIASFSLPAAMMAKEAVNRSLELTLAEGLRFERRLFQSLFATEDQK 240 Query: 243 EGMAAFIEKRKPVNKNR 259 EGMAAF+ KRK K+R Sbjct: 241 EGMAAFVAKRKAEFKHR 257