BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0245.0002.p         (156 letters)

Database: COGmodified 
           192,987 sequences; 59,019,183 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

mlr7801 [S] COG3791 Uncharacterized conserved protein Mlo Mesorh...   141   7e-34
CC3683 Non COG                                                        132   4e-31
AGc1978 [S] COG3791 Uncharacterized conserved protein Atu Agroba...   130   8e-31
SMc02550 [S] COG3791 Uncharacterized conserved protein Sme Sinor...   130   9e-31
SMc02548 [S] COG3791 Uncharacterized conserved protein Sme Sinor...   125   4e-29

>mlr7801 [S] COG3791 Uncharacterized conserved protein Mlo Mesorhizobium
           loti
          Length = 163

 Score =  141 bits (355), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 71/149 (47%), Positives = 91/149 (61%), Gaps = 3/149 (2%)

Query: 9   PVLTGGCQCGPVRFAVSAAPTRISICHCRMCQKASGAPFASFADIDRNDFKWTRGKPAAF 68
           P  TGGCQCG VRF V  A    SICHCRMCQKA G+ +A    +      WTRG+P  F
Sbjct: 7   PTYTGGCQCGAVRFRVEGALGDASICHCRMCQKAFGSFYAPLVSVRGARLDWTRGEPKYF 66

Query: 69  RSSSIAERDFCAACGTPLSFRRIDGPRIEIMTGALDRPDRVIPTQQFGTESRHGWVVGIA 128
           RSSS  +R FCA CGTPL+F   DG  + +  GA D P  ++P  Q+GTE++  +V  I 
Sbjct: 67  RSSSHVDRGFCADCGTPLTFTAPDG--VGLAIGAFDNPAEIVPLIQWGTEAKLPYVDTIP 124

Query: 129 NLPSQTTMQNYGPE-KMATIISHQHPDHD 156
            LP + TM +      +A ++S+QHPDHD
Sbjct: 125 QLPGEETMADISSAPYLADLVSYQHPDHD 153


>CC3683 Non COG
          Length = 143

 Score =  132 bits (331), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 67/146 (45%), Positives = 83/146 (56%), Gaps = 6/146 (4%)

Query: 11  LTGGCQCGPVRFAVSAAPTRISICHCRMCQKASGAPFASFADIDRNDFKWTRGKPAAFRS 70
           L+GGCQCG VRF V   P R SIC+CRMCQKA   PF +   ++  D  WTRG P  F+S
Sbjct: 3   LSGGCQCGAVRFRVEGEPGRASICNCRMCQKAFAGPFGALVTVEVGDLTWTRGAPTHFQS 62

Query: 71  SSIAERDFCAACGTPLSFRRIDGPRIEIMTGALDRPDRVIPTQQFGTESRHGWVVGIANL 130
           S   +R FCAACGTPL+F   D  +I++   A D P  V P  Q   E R  W+  +A +
Sbjct: 63  SDQIKRGFCAACGTPLTFEWSDS-KIDLAVFAFDDPSTVEPGVQLAVEGRPAWMDHLAQM 121

Query: 131 PSQTTMQNYGPEKMATIISHQHPDHD 156
           P +  M   G      + S QHPDHD
Sbjct: 122 PVRPPMGPGG-----AVTSRQHPDHD 142


>AGc1978 [S] COG3791 Uncharacterized conserved protein Atu Agrobacterium
           tumefaciens strain C58 (Cereon)
          Length = 157

 Score =  130 bits (328), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 64/146 (43%), Positives = 89/146 (60%), Gaps = 3/146 (2%)

Query: 12  TGGCQCGPVRFAVSAAPTRISICHCRMCQKASGAPFASFADIDRNDFKWTRGKPAAFRSS 71
           TGGCQCG VRF  +      SICHCRMCQKA GA +A    +   +F+WTRG+P  F+SS
Sbjct: 5   TGGCQCGAVRFRATGDLQDSSICHCRMCQKAFGAYYAPLVSVRNVEFEWTRGEPKRFQSS 64

Query: 72  SIAERDFCAACGTPLSFRRIDGPRIEIMTGALDRPDRVIPTQQFGTESRHGWVVGIANLP 131
           S+ +R FC  CGTPL++   DG  + +  GA D P  + PT Q+G E +  +V  +  LP
Sbjct: 65  SVVKRGFCPECGTPLTYEAPDG--VAVAAGAFDDPAALPPTIQWGVERKIDFVDTLHTLP 122

Query: 132 SQTTMQNYGP-EKMATIISHQHPDHD 156
           +  T  +    + +  ++S+QHPDHD
Sbjct: 123 AVATEDDLTQVDYLTNLVSYQHPDHD 148


>SMc02550 [S] COG3791 Uncharacterized conserved protein Sme Sinorhizobium
           meliloti
          Length = 160

 Score =  130 bits (328), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 67/153 (43%), Positives = 90/153 (58%), Gaps = 7/153 (4%)

Query: 7   ATPVLTGGCQCGPVRFAVSAAPTRISICHCRMCQKASGAPFASFADIDRNDFKWTRGKPA 66
           A  + TGGCQCG VRF V       S+CHCRMCQKASG  +     +      WTRG+  
Sbjct: 2   ADEINTGGCQCGAVRFRVEGKLGDASVCHCRMCQKASGNFYLPLVSVRGAKLVWTRGERK 61

Query: 67  AFRSSSIAERDFCAACGTPLSFRRIDGPRIEIMTGALDRPDRVIPTQQFGTESRHGWVVG 126
            FRSS++  R FC  CGTPL++   DG  + I   A DRP+ + PT Q+G E +  +V  
Sbjct: 62  RFRSSNVVWRGFCGDCGTPLTYEAPDGMALAI--AAFDRPEGIAPTIQWGVEGKLPYVDH 119

Query: 127 IANLPSQTTMQNYGPEK---MATIISHQHPDHD 156
           ++ LP + TM +  PE    +A ++S+QHPDHD
Sbjct: 120 VSKLPGEETMAD--PEAVSFLADLVSYQHPDHD 150


>SMc02548 [S] COG3791 Uncharacterized conserved protein Sme Sinorhizobium
           meliloti
          Length = 166

 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 65/151 (43%), Positives = 83/151 (54%), Gaps = 4/151 (2%)

Query: 10  VLTGGCQCGPVRFAVSAAPTRISICHCRMCQKASGAPFASFADIDRNDFKWTRGKPAAFR 69
           + TGGCQCG VR+          ICHCRMCQKA+G  F   A+I R  F+ TRG+PA +R
Sbjct: 5   IFTGGCQCGAVRYRAEGTLGDPHICHCRMCQKAAGNYFLPLANIAREGFRITRGQPAWYR 64

Query: 70  SSSIAERDFCAACGTPLSFRRIDGPRIEIMTGALDRPDRVIPTQQFGTESRHGWVVGIAN 129
           SS +  R FC  CGTPL +   D   + I  G+LD PD V P  Q G ESR  W   +  
Sbjct: 65  SSDLVRRGFCRDCGTPLFYDMPDASFLNIALGSLDDPDDVQPVYQSGVESRMFWFSHLPQ 124

Query: 130 LPSQTTMQ--NYGPEKMATII--SHQHPDHD 156
           LP + T        E+   ++  + QHPD+D
Sbjct: 125 LPEKETDDGSEAAAERHLIVLESNRQHPDYD 155