BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0243.0070.p (301 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value MA0878 [E] COG4608 ABC-type oligopeptide transport system, ATPas... 233 5e-61 BH0351 [E] COG4608 ABC-type oligopeptide transport system, ATPas... 224 2e-58 PA4506 [E] COG4608 ABC-type oligopeptide transport system, ATPas... 211 1e-54 BH3645 [E] COG4608 ABC-type oligopeptide transport system, ATPas... 209 5e-54 PAE1296 [E] COG4608 ABC-type oligopeptide transport system, ATPa... 204 1e-52 >MA0878 [E] COG4608 ABC-type oligopeptide transport system, ATPase component Mac Methanosarcina acetivorans str.C2A Length = 341 Score = 233 bits (593), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 126/323 (39%), Positives = 173/323 (53%), Gaps = 70/323 (21%) Query: 4 LLEVEGLVKHFVAERSLFGRPTAHVRAVDGVSFTVEAGKTLALVGESGCGKSTVSRLVLR 63 ++EV GL KHF + LF + +V+AVDG+ F +E G+T LVGESGCGK+TV RL+ Sbjct: 1 MIEVNGLKKHFSS--GLFCK--KYVKAVDGIDFRIEKGETFGLVGESGCGKTTVGRLIAG 56 Query: 64 LIEPDAGRIRFEGRDLGTLNAEQLRAFRRDAQLIFQDPYASLNPRMTVSQILTEPLALHN 123 LIEP G+++F+ DL LN + L+ R Q+IFQ+PYA+LNPRM + + + EPL L++ Sbjct: 57 LIEPSFGKVKFDNVDLFELNKKDLKKLRPRLQIIFQNPYAALNPRMLIGEAIAEPLKLYS 116 Query: 124 LVPAADRRERVEELLRLVGLEPRFARRYPH--------------------EFXIAD---- 159 V R E+V EL+ +VGL RYPH EF +AD Sbjct: 117 TVSREKRDEKVMELIEMVGLNSEHLNRYPHELSGGQNQRAVLARILAINPEFIVADEPTS 176 Query: 160 ------RVAVMNL----------------------------------GTIVETADAQALF 179 + ++NL G +VE +F Sbjct: 177 SLDVNVQAQILNLLRDVNKKFGLTCLFISHDLEVIKLITDRVAVMYLGKLVEIGKTDEIF 236 Query: 180 AAPRHPYSRALLSAIPVPKPRARRSRIVLEGELPSALNPPSGCRFHTRCPYVIARCRSEV 239 +HPY++ALLSAIPV P +R +I+L+GE+P+ +NPPSGCRFHTRC Y C+ E Sbjct: 237 REAKHPYTKALLSAIPVVDPEVKREKIILQGEIPNPINPPSGCRFHTRCQYKKEICKIEE 296 Query: 240 PQLREDGTGYATACHRTGELPGA 262 P L G G+ ACHR E+PG Sbjct: 297 PLLI--GEGHKVACHRADEIPGV 317 >BH0351 [E] COG4608 ABC-type oligopeptide transport system, ATPase component Bha Bacillus halodurans Length = 332 Score = 224 bits (572), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 128/318 (40%), Positives = 167/318 (52%), Gaps = 68/318 (21%) Query: 4 LLEVEGLVKHFVAERSLFGRPTAHVRAVDGVSFTVEAGKTLALVGESGCGKSTVSRLVLR 63 LLE +GL KHF F R A +RAVDGV T+ AG+TL +VGESGCGKST+ +L++R Sbjct: 5 LLEAKGLTKHFDVSEGFFKRKKAVLRAVDGVDLTIYAGETLGIVGESGCGKSTLGQLLMR 64 Query: 64 LIEPDAGRIRFEGRDLGTLNAEQLRAFRRDAQLIFQDPYASLNPRMTVSQILTEPLALH- 122 L+EP G + F G D L E LR R D Q+IFQDP++SLNPRMTV +I+ EPL H Sbjct: 65 LLEPTRGTLSFAGSDFLALKGEALRQKRSDIQIIFQDPFSSLNPRMTVREIIGEPLKTHR 124 Query: 123 -----NLVPAAD-----------------------RRERVEELLRLVGLEPRF------- 147 +L+ D +R+R+ + R + L+P+ Sbjct: 125 LAKGNDLIKRVDELMDAVGLDRSYAKRYPHEFSGGQRQRIG-IARAIALKPKLIICDEPV 183 Query: 148 --------------ARRYPHEFX---------------IADRVAVMNLGTIVETADAQAL 178 R EF I+DR+AVM LG +VE A AL Sbjct: 184 SALDVSIQAQILNLMVRLQKEFQLTFLFIAHGLPAVKHISDRMAVMYLGKVVELASKDAL 243 Query: 179 FAAPRHPYSRALLSAIPVPKPRARRSR--IVLEGELPSALNPPSGCRFHTRCPYVIARCR 236 FA P HPYS L+ A+P+P P R + + LEG+LPS ++PPSGCRFH RCPY +C Sbjct: 244 FAQPMHPYSEGLIQAVPIPDPTVRNDKKWVTLEGDLPSPVHPPSGCRFHPRCPYAQDKCT 303 Query: 237 SEVPQLREDGTGYATACH 254 + P L E G+ ACH Sbjct: 304 VQEPALTEKEPGHFVACH 321 >PA4506 [E] COG4608 ABC-type oligopeptide transport system, ATPase component Pae Pseudomonas aeruginosa Length = 323 Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 123/325 (37%), Positives = 169/325 (52%), Gaps = 66/325 (20%) Query: 1 MTALLEVEGLVKHFVAERSLFGRPTAHVRAVDGVSFTVEAGKTLALVGESGCGKSTVSRL 60 M +L L +H+ R LF + A VRA++GVSF +EAGKTLA+VGESGCGKST++R Sbjct: 1 METVLTARDLTRHYEVSRGLF-KGHAQVRALNGVSFELEAGKTLAVVGESGCGKSTLARA 59 Query: 61 VLRLIEPDAGRIRFEGRDLGTLNAEQLRAFRRDAQLIFQDPYASLNPRMTVSQILTEPLA 120 + + EP +G ++ G+++ + +Q R RRD Q++FQ+PYASLNPR + L EPL Sbjct: 60 LTLIEEPTSGSLKIAGQEVKGASKDQRRQLRRDVQMVFQNPYASLNPRQKIGDQLAEPLL 119 Query: 121 LHNLVPAADRRERVEELLRLVGLEPRFARRYPHEFX--------------------IAD- 159 ++ + +RRE+V++++R VGL P +RYPH F +AD Sbjct: 120 INTALSREERREKVQQMMRQVGLRPEHYQRYPHMFSGGQRQRIALARAMMLQPKVLVADE 179 Query: 160 ------------------------RVAVM----NLGTIVETAD---------------AQ 176 R A + NL + AD A Sbjct: 180 PTSALDVSIQAQVLNLFMDLQQQFRTAYVFISHNLAVVRHVADDVLVMYLGRPAEMGPAD 239 Query: 177 ALFAAPRHPYSRALLSAIPVPKPRARRSRIVLEGELPSALNPPSGCRFHTRCPYVIARCR 236 L+ P HPY+RALLSA P P + +I ++GELP+ LNPP GC FH RCPY RCR Sbjct: 240 KLYENPLHPYTRALLSATPAIHPDPTKPKIRIQGELPNPLNPPEGCAFHKRCPYATERCR 299 Query: 237 SEVPQLREDGTGYATACHRTGELPG 261 SEVP+LR ACH + G Sbjct: 300 SEVPELRLLDQ-RQVACHHAEQFLG 323 >BH3645 [E] COG4608 ABC-type oligopeptide transport system, ATPase component Bha Bacillus halodurans Length = 322 Score = 209 bits (533), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 126/315 (40%), Positives = 162/315 (51%), Gaps = 64/315 (20%) Query: 4 LLEVEGLVKHFVAERSLFGRPTAHVRAVDGVSFTVEAGKTLALVGESGCGKSTVSRLVLR 63 LLEV+ L K F F R VRAVD +SF+V G+ L +VGESGCGKST + +LR Sbjct: 5 LLEVKNLTKSFDINGGFFSRKVGEVRAVDNLSFSVYEGEVLGIVGESGCGKSTTGKAILR 64 Query: 64 LIEPDAGRIRFEGRDLGTLNAEQLRAFRRDAQLIFQDPYASLNPRMT----------VSQ 113 LIEP +G + F G ++ L+ +R RRD Q+IFQDPYASLNPR T V Q Sbjct: 65 LIEPSSGEVYFAGTEITALSEGDMRKRRRDMQIIFQDPYASLNPRHTIEKIIREPLIVHQ 124 Query: 114 ILTEP----------------------------------------LALH-------NLVP 126 I T+ LA+H V Sbjct: 125 IGTKKEQLERVEELLETVGLSSDHATRYPHQFSGGQRQRIGIARALAVHPKLVICDEPVS 184 Query: 127 AADRRERVEELLRLVGLEPRFARRY---PHEFX----IADRVAVMNLGTIVETADAQALF 179 A D + + L + L+ FA Y H+ I+DRVAVM LG +VE A LF Sbjct: 185 ALDVSVQSQILNLMADLKETFALTYIFIAHDLSVVKHISDRVAVMYLGRMVEMATKDQLF 244 Query: 180 AAPRHPYSRALLSAIPVPKPRARRSRIVLEGELPSALNPPSGCRFHTRCPYVIARCRSEV 239 P+HPY+RALLSA+PVP P A + +I+L+G++PS NPP GC FHTRCP + C+ + Sbjct: 245 ENPKHPYTRALLSAVPVPDPDAAKEKILLKGDVPSPSNPPEGCAFHTRCPDCMDVCKIKR 304 Query: 240 PQLREDGTGYATACH 254 P L E G+ ACH Sbjct: 305 PSLHEKEKGHYVACH 319 >PAE1296 [E] COG4608 ABC-type oligopeptide transport system, ATPase component Pya Pyrobaculum aerophilum Length = 320 Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 132/326 (40%), Positives = 175/326 (53%), Gaps = 80/326 (24%) Query: 1 MTALLEVEGLVKHFVAERSLFGRPTAHVRAVDGVSFTVEAGKTLALVGESGCGKSTVSRL 60 M AL++ E L K+F L RP +V+AVD V + G+TL LVGE+G GK+T+ RL Sbjct: 1 MKALVKTERLSKYFPVGGLL--RPRGYVKAVDNVDLEIYEGETLGLVGETGSGKTTLGRL 58 Query: 61 VLRLIEPDAGRIRFEGRDLGTLNAEQLRAFRRDAQLIFQDPYASLNPRMTVSQILTEPLA 120 +L+LIEP +GRI F+G D+ L+ E+LR FRR AQ+IFQDPY SLNPR+TV Q L E + Sbjct: 59 ILKLIEPTSGRIVFDGVDITRLSGEKLREFRRKAQIIFQDPYMSLNPRLTVYQTLLEVIK 118 Query: 121 LHNLVPAADRRERVEEL----------------------------LRLVGLEPRF----- 147 +H L P +D E + ++ LR + LEP+F Sbjct: 119 VHKL-PISDPEEYIAKMLELVGLERGQLHRYPHEFSGGQRQRIAILRALILEPKFLVLDE 177 Query: 148 ------------------------------------ARRYPHEFXIADRVAVMNLGTIVE 171 A RY ++DR+AVM +G IVE Sbjct: 178 PTSALDVSVQAQILNMLKDLQKRLGLTYLFISHDIGAVRY-----MSDRIAVMYMGKIVE 232 Query: 172 TADAQALFAAPRHPYSRALLSAIPVPKPRARRSR--IVLEGELPSALNPPSGCRFHTRCP 229 A A+ P HPY++AL+SA+PVP PRA R R ++L+GE PS +NPP GCRF+ RCP Sbjct: 233 LGPADAVIKEPLHPYTQALISALPVPDPRAARGRKTLLLQGEPPSPINPPPGCRFYPRCP 292 Query: 230 YVI-ARCRSEVPQLREDGTGYATACH 254 Y I +C E PQL+E G ACH Sbjct: 293 YFIKGKCDKEEPQLKEVKNGRYVACH 318