BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0243.0068.p (266 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value TM0501 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel trans... 311 7e-85 BH0028 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel trans... 307 2e-83 CAC0179 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel tran... 297 1e-80 BH0350 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel trans... 295 6e-80 BH3646 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel trans... 290 3e-78 >TM0501 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Tma Thermotoga maritima Length = 327 Score = 311 bits (798), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 151/243 (62%), Positives = 185/243 (76%) Query: 1 MTHAVDSVDLSVANGATLGLVGESGCGKSVTSLAIMGLLPKQSAAVSGAIRFDGFDLLDV 60 + AVD V V G TLG+VGESG GKSVTSL+IM LL + V G I F G +LL++ Sbjct: 14 VVKAVDGVSFEVREGETLGIVGESGSGKSVTSLSIMRLLDQNGKIVDGKIIFKGRNLLEL 73 Query: 61 PDATLRDLRGNRLAMIFQEPMTSLNPSFTIGDQITETILRHRGGSRRAARERAIELLRRV 120 + +R +RG +AMIFQEPM +LNP FTIGDQI E I+ H+ S + AR+ AI+LLR+V Sbjct: 74 SENEMRKIRGKEIAMIFQEPMVALNPVFTIGDQIMEAIILHQNVSEKEARKMAIDLLRKV 133 Query: 121 HIPSPEKRIDEFPHKLSGGMRQRVMIAMALACDPQLLIADEPTTALDVTLQAQILDLMRE 180 IP PEKR+DE+PH+LSGGMRQR MIAMAL+C P LLIADEPTTALDVT+QAQIL+LM+E Sbjct: 134 GIPEPEKRVDEYPHQLSGGMRQRAMIAMALSCRPSLLIADEPTTALDVTIQAQILELMKE 193 Query: 181 LKAASGAAIILITHDLGVVGEVCDEVAVMYAGEIVERAPVDELFANPQHPYTVGLLGSIP 240 L+ G AIILITHD+GVV E+ D+VAVMYAG++VE V +F P+HPYT LL SIP Sbjct: 194 LQKEYGMAIILITHDMGVVAEMSDKVAVMYAGKVVEYGDVKTIFTEPKHPYTYALLESIP 253 Query: 241 RLD 243 R+D Sbjct: 254 RID 256 >BH0028 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Bha Bacillus halodurans Length = 347 Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 145/240 (60%), Positives = 187/240 (77%) Query: 4 AVDSVDLSVANGATLGLVGESGCGKSVTSLAIMGLLPKQSAAVSGAIRFDGFDLLDVPDA 63 AVD V SV G TLG+VGESG GKS+TSL+I+ L+ + V G I F G +L+ +A Sbjct: 31 AVDGVTFSVPKGKTLGIVGESGSGKSITSLSILKLIQEPGKVVGGEINFKGENLVTKNEA 90 Query: 64 TLRDLRGNRLAMIFQEPMTSLNPSFTIGDQITETILRHRGGSRRAARERAIELLRRVHIP 123 +R +RGN ++MIFQEPMTSLNP +T+G QI+E+ H ++ A +R++++L+ V IP Sbjct: 91 YMRKIRGNEISMIFQEPMTSLNPVYTVGQQISESFRIHEKLGKKEALKRSVDMLKLVGIP 150 Query: 124 SPEKRIDEFPHKLSGGMRQRVMIAMALACDPQLLIADEPTTALDVTLQAQILDLMRELKA 183 SPEKR+ ++PH+LSGGMRQRVMIAMALAC+P+LLIADEPTTALDVT+QAQIL+LM++L+ Sbjct: 151 SPEKRVHQYPHELSGGMRQRVMIAMALACNPELLIADEPTTALDVTIQAQILELMKDLQD 210 Query: 184 ASGAAIILITHDLGVVGEVCDEVAVMYAGEIVERAPVDELFANPQHPYTVGLLGSIPRLD 243 G +II+ITHDLGVV E CD VAVMY G++VE A V LF NP+HPYTVGLL S+PR D Sbjct: 211 RLGMSIIMITHDLGVVAETCDYVAVMYCGKVVEYADVKTLFKNPRHPYTVGLLNSLPRHD 270 >CAC0179 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Cac Clostridium acetobutylicum Length = 325 Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 138/242 (57%), Positives = 184/242 (76%), Gaps = 1/242 (0%) Query: 4 AVDSVDLSVANGATLGLVGESGCGKSVTSLAIMGLLPKQSAAVSGA-IRFDGFDLLDVPD 62 AVD V + TL +VGESGCGKS+T+++IM L+P + G I FDG DL+ + Sbjct: 24 AVDDVSFEIKEKETLAIVGESGCGKSITAMSIMRLIPNPPGKIEGGEILFDGKDLIKMRQ 83 Query: 63 ATLRDLRGNRLAMIFQEPMTSLNPSFTIGDQITETILRHRGGSRRAARERAIELLRRVHI 122 + +R++RGN++++IFQEPMTSLNP FT+G+QI E ++ H+ ++ A+ AI++L V I Sbjct: 84 SDIREIRGNKISLIFQEPMTSLNPVFTVGEQIEEALILHKKMDKKQAKREAIKMLTMVRI 143 Query: 123 PSPEKRIDEFPHKLSGGMRQRVMIAMALACDPQLLIADEPTTALDVTLQAQILDLMRELK 182 P E+ +PH+LSGGMRQRV+IAMA++C P+LLIADEPTTALDVT+QAQILD+MRELK Sbjct: 144 PRAEEIYKAYPHELSGGMRQRVVIAMAISCSPRLLIADEPTTALDVTIQAQILDIMRELK 203 Query: 183 AASGAAIILITHDLGVVGEVCDEVAVMYAGEIVERAPVDELFANPQHPYTVGLLGSIPRL 242 +IILITHDLG+V E+ D V VMYAG+IVE+APV EL+ NP+HPYTVGLL S P + Sbjct: 204 EKVNTSIILITHDLGIVAEMADYVVVMYAGKIVEKAPVIELYKNPKHPYTVGLLKSKPVI 263 Query: 243 DR 244 +R Sbjct: 264 NR 265 >BH0350 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Bha Bacillus halodurans Length = 329 Score = 295 bits (756), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 143/239 (59%), Positives = 181/239 (75%) Query: 4 AVDSVDLSVANGATLGLVGESGCGKSVTSLAIMGLLPKQSAAVSGAIRFDGFDLLDVPDA 63 +V+ V V +G T+ +VGESGCGKSVTSL+IMGL+ V G IRF+G DL + + Sbjct: 25 SVNGVSFEVKHGETVAVVGESGCGKSVTSLSIMGLVRSPGKIVGGDIRFNGQDLTTISER 84 Query: 64 TLRDLRGNRLAMIFQEPMTSLNPSFTIGDQITETILRHRGGSRRAARERAIELLRRVHIP 123 R LRGN L+MIFQEP+TSLNP FTIG+Q+ E IL+H+ ++ A+++ IE+L++V IP Sbjct: 85 EYRKLRGNELSMIFQEPLTSLNPLFTIGNQLGEVILQHQQVTKEEAKQKGIEMLKKVGIP 144 Query: 124 SPEKRIDEFPHKLSGGMRQRVMIAMALACDPQLLIADEPTTALDVTLQAQILDLMRELKA 183 E+ +PH+LSGGMRQRVMIAMALAC+P+LLIADEPTTALDVT+QAQIL LMR+L Sbjct: 145 RAEQVYRSYPHQLSGGMRQRVMIAMALACEPKLLIADEPTTALDVTIQAQILQLMRKLVK 204 Query: 184 ASGAAIILITHDLGVVGEVCDEVAVMYAGEIVERAPVDELFANPQHPYTVGLLGSIPRL 242 + AI+LITHDLGVV E+ D V VMYAG++VE+A V LFA P HPYT GLL S P + Sbjct: 205 ENDTAILLITHDLGVVAEMADTVIVMYAGQVVEQADVFTLFATPAHPYTQGLLASTPNI 263 >BH3646 [EP] COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Bha Bacillus halodurans Length = 329 Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 140/243 (57%), Positives = 181/243 (74%), Gaps = 1/243 (0%) Query: 4 AVDSVDLSVANGATLGLVGESGCGKSVTSLAIMGLLPKQSAAV-SGAIRFDGFDLLDVPD 62 AVD V L + G +G+VGESGCGKSVTSL+IM L+P + SG + F G DL+ V Sbjct: 24 AVDGVSLRLHQGEIIGIVGESGCGKSVTSLSIMQLVPNPPGKIMSGHVYFKGEDLVQVSP 83 Query: 63 ATLRDLRGNRLAMIFQEPMTSLNPSFTIGDQITETILRHRGGSRRAARERAIELLRRVHI 122 ++ +RGN +AMIFQEPMTSLNP FTIG+Q+ E I HR +++ AR++A+ +L RV I Sbjct: 84 KRMKQIRGNDIAMIFQEPMTSLNPLFTIGNQLIEAIRNHRKMTKQEARKQAVTMLERVGI 143 Query: 123 PSPEKRIDEFPHKLSGGMRQRVMIAMALACDPQLLIADEPTTALDVTLQAQILDLMRELK 182 P ++ E+PH+LSGGMRQRVMIAMA+ CDP++LIADEPTTALDVT+QAQILDLMR L Sbjct: 144 PRADEIASEYPHQLSGGMRQRVMIAMAMCCDPKVLIADEPTTALDVTIQAQILDLMRHLN 203 Query: 183 AASGAAIILITHDLGVVGEVCDEVAVMYAGEIVERAPVDELFANPQHPYTVGLLGSIPRL 242 A AI+LITHDLGVV E+C+ V VMYAG++VE V + +P+HPYT GLL S+P++ Sbjct: 204 EAHDTAILLITHDLGVVAELCNRVVVMYAGQVVEEGDVRMILKHPKHPYTKGLLKSLPKI 263 Query: 243 DRR 245 + Sbjct: 264 HEQ 266