BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0243.0065.p (330 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SMc02424 [E] COG4608 ABC-type oligopeptide transport system, ATP... 361 1e-99 AGl359 [E] COG4608 ABC-type oligopeptide transport system, ATPas... 354 2e-97 SA0852 [E] COG4608 ABC-type oligopeptide transport system, ATPas... 324 2e-88 TM1063 [E] COG4608 ABC-type oligopeptide transport system, ATPas... 323 2e-88 CAC3628 [E] COG4608 ABC-type oligopeptide transport system, ATPa... 322 1e-87 >SMc02424 [E] COG4608 ABC-type oligopeptide transport system, ATPase component Sme Sinorhizobium meliloti Length = 334 Score = 361 bits (927), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 180/320 (56%), Positives = 227/320 (70%), Gaps = 15/320 (4%) Query: 6 IEVRNLRRVFDVSKPWLNRVIEGGHLEFLKAVDGVSFDIKRGETFALVGESGSGKTTVAR 65 + V L + FDVS PWLNRV+E ++L+AV+ +SF + G ++VGESG GK+TVAR Sbjct: 11 LTVDRLVKTFDVSAPWLNRVVERKPRQYLQAVNDISFTVPAGGCLSIVGESGCGKSTVAR 70 Query: 66 MVVGLLPPSSGEVVIDGVSMTDPRQGQARRRLRRRIQMVFQDPYASLNPRYRVAAIIAEP 125 +V GL P+SG G+ + G QM+FQDPYASLNPR+RV IIAEP Sbjct: 71 LVTGLHRPTSG-----GIRFAPGKSGAPLS-----AQMIFQDPYASLNPRWRVKNIIAEP 120 Query: 126 IRAFDLIQGERDIKARVGELLSLVGLHPDDGQKFPHEFSGGQRQRVAIARALASEAEFIV 185 +R L + ++ RV ELL +VGL P DG+KFPHEFSGGQRQR++IARALASE EF+V Sbjct: 121 LRELKLRKTAAEVTERVEELLGIVGLSPSDGEKFPHEFSGGQRQRISIARALASEPEFLV 180 Query: 186 CDEPTSALDVSVQAQILNLMRDLQDKFGLTYLFISHNLAVVRHMASRIGVMYLGRIVEIA 245 CDEPTSALDVSVQAQ+LNLMR LQD+ GLTYLFISH+L+VVR M+ RI VMYLGRIVE Sbjct: 181 CDEPTSALDVSVQAQVLNLMRRLQDELGLTYLFISHDLSVVRQMSDRIAVMYLGRIVEEG 240 Query: 246 EGRELFENPRMPYTKMLLGAVPDLAMSGRQRIPVKGEIPNPIDPPQGCSFNPRCPLAFDL 305 + ELF PR PYT++LL +P++ R R P GE+P+P+ PP GC+F+PRCP+A Sbjct: 241 DTEELFAQPRHPYTRLLLQTIPNIEAPNRNREPASGEVPSPLKPPSGCAFHPRCPVATAR 300 Query: 306 CRQKTPE---LIDG--VACH 320 C ++ PE L +G VACH Sbjct: 301 CSKEVPEVRVLQNGTRVACH 320 >AGl359 [E] COG4608 ABC-type oligopeptide transport system, ATPase component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 349 Score = 354 bits (908), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 179/323 (55%), Positives = 222/323 (68%), Gaps = 15/323 (4%) Query: 6 IEVRNLRRVFDVSKPWLNRVIEGGHLEFLKAVDGVSFDIKRGETFALVGESGSGKTTVAR 65 + V+ L + FDVS P LNR+IE +F++AV+ + F + G ++VGESG GK+TVAR Sbjct: 25 LTVKGLTKTFDVSAPLLNRIIERKPRQFVQAVNDIDFAVPAGGCLSIVGESGCGKSTVAR 84 Query: 66 MVVGLLPPSSGEVVIDGVSMTDPRQGQARRRLRRRIQMVFQDPYASLNPRYRVAAIIAEP 125 +V GL PS+G P Q M+FQDPYASLNPR+RV IIAEP Sbjct: 85 LVTGLFRPSAGAFQFASGGNGKPLSAQ----------MIFQDPYASLNPRWRVKNIIAEP 134 Query: 126 IRAFDLIQGERDIKARVGELLSLVGLHPDDGQKFPHEFSGGQRQRVAIARALASEAEFIV 185 IR L + + RV ELL VGL DG+KFPHEFSGGQRQR++IARALASE EF+V Sbjct: 135 IRELKLRATKAEAMERVEELLQTVGLSASDGEKFPHEFSGGQRQRISIARALASEPEFLV 194 Query: 186 CDEPTSALDVSVQAQILNLMRDLQDKFGLTYLFISHNLAVVRHMASRIGVMYLGRIVEIA 245 CDEPTSALDVSVQAQ+LNLMR LQD+ GLTYLFISH+++VVRHM+ RI VMYLGRIVE Sbjct: 195 CDEPTSALDVSVQAQVLNLMRRLQDELGLTYLFISHDMSVVRHMSDRIAVMYLGRIVEEG 254 Query: 246 EGRELFENPRMPYTKMLLGAVPDLAMSGRQRIPVKGEIPNPIDPPQGCSFNPRCPLAFDL 305 + ELF NPR PYT++LL +P++ R R V GE+P+P+ PP GC+F+PRCPLA Sbjct: 255 DTEELFANPRHPYTRLLLQTIPNIKTPQRDREIVAGEVPSPLKPPSGCAFHPRCPLATAQ 314 Query: 306 CRQKTPE---LIDG--VACHAVN 323 C + P+ L +G VACH V Sbjct: 315 CSAEVPKVKSLANGTRVACHLVE 337 >SA0852 [E] COG4608 ABC-type oligopeptide transport system, ATPase component Sau Staphylococcus aureus N315 Length = 326 Score = 324 bits (830), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 158/325 (48%), Positives = 224/325 (68%), Gaps = 13/325 (4%) Query: 4 TLIEVRNLRRVFDVSKPWLNRVIEGGHLEFLKAVDGVSFDIKRGETFALVGESGSGKTTV 63 ++EV +++ + + L + +++KAVD VSF IK+G+TF LVGESG GK+T+ Sbjct: 3 NILEVNQIKKYYKIKTGLLQKT------QYVKAVDDVSFSIKKGQTFGLVGESGCGKSTL 56 Query: 64 ARMVVGLLPPSSGEVVIDGVSMTDPRQGQARRRLRRRIQMVFQDPYASLNPRYRVAAIIA 123 ++++ L +SG ++++G +T QG+ R+ R++ QM+FQDPYASLNP V II+ Sbjct: 57 GKVIIRLEDATSGSIIVNGEDITR-LQGKKLRKSRQQYQMIFQDPYASLNPMQMVGDIIS 115 Query: 124 EPIRAFDLIQGERDIKARVGELLSLVGLHPDDGQKFPHEFSGGQRQRVAIARALASEAEF 183 EPI + + E +IK V LL VGL D K+ HEFSGGQRQRV IARALA Sbjct: 116 EPILNYKKLPKE-EIKKEVLYLLKCVGLSEDAYYKYAHEFSGGQRQRVGIARALALRPSL 174 Query: 184 IVCDEPTSALDVSVQAQILNLMRDLQDKFGLTYLFISHNLAVVRHMASRIGVMYLGRIVE 243 IV DEP SALDVSVQ+Q+LNL++DLQ++F L+YLFI+H+L+VV+H++ IGVMYLG IVE Sbjct: 175 IVADEPVSALDVSVQSQVLNLLKDLQEQFKLSYLFIAHDLSVVKHISDVIGVMYLGHIVE 234 Query: 244 IAEGRELFENPRMPYTKMLLGAVPDLAMSGRQRIPVKGEIPNPIDPPQGCSFNPRCPLAF 303 IA +E++ENP+ PYTK L+ ++P + RI +KGE+P+P +PPQGC F+ RCP+A Sbjct: 235 IASDKEIYENPKHPYTKALISSIPQIDKHNNNRIILKGELPSPSNPPQGCPFHTRCPIAK 294 Query: 304 DLCRQKTPELID-----GVACHAVN 323 D C++ P+L D VAC V+ Sbjct: 295 DKCKENIPQLKDIGNEHQVACFYVD 319 >TM1063 [E] COG4608 ABC-type oligopeptide transport system, ATPase component Tma Thermotoga maritima Length = 341 Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 167/334 (50%), Positives = 235/334 (70%), Gaps = 18/334 (5%) Query: 5 LIEVRNLRRVFDVSKPWLNRVIEGGHLEFLKAVDGVSFDIKRGETFALVGESGSGKTTVA 64 L+EV+NL++ F + K R + G +LKAVDG+SF I+ GET LVGESG GKTT A Sbjct: 3 LLEVKNLKKYFPIIKRGFRRKVVG----YLKAVDGISFHIEEGETLGLVGESGCGKTTTA 58 Query: 65 RMVVGLLPPSSGEVVI--DG--VSMTDPRQGQARRR-LRRRIQMVFQDPYASLNPRYRVA 119 ++++ + P+ GE+V+ DG V +T + + R + +RR +QM+FQDPY+SLNPR V Sbjct: 59 KLIMRGIEPTEGEIVLNMDGEKVDITKLSEKELREKGVRRFLQMIFQDPYSSLNPRMTVR 118 Query: 120 AIIAEPIRAFDLIQGERDIKARVGELLSLVGLHPDDGQKFPHEFSGGQRQRVAIARALAS 179 IIAEP+ +I+G+ +I A V +LL VGL P+ Q++PH FSGGQRQR+AIARA+A Sbjct: 119 DIIAEPLVVNGVIKGKEEIDAIVSDLLRAVGLRPEYMQRYPHAFSGGQRQRIAIARAIAL 178 Query: 180 EAEFIVCDEPTSALDVSVQAQILNLMRDLQDKFGLTYLFISHNLAVVRHMASRIGVMYLG 239 + + ++CDEPTSALDVSVQAQI+NL++DLQ ++ LTYLFISH+L VV H+ +R+ VMY+G Sbjct: 179 KPKLVLCDEPTSALDVSVQAQIINLLKDLQKEYNLTYLFISHDLGVVEHITNRVAVMYVG 238 Query: 240 RIVEIAEGRELFENPRMPYTKMLLGAVPDLAMSGRQRIP-VKGEIPNPIDPPQGCSFNPR 298 RIVE+AE ELF +P+ PYT+ LL AVP +++ + GE+P+P +PP GC F+PR Sbjct: 239 RIVELAETEELFSSPKHPYTEALLSAVPKPDPKRKRKKAQLTGEVPDPSNPPSGCYFHPR 298 Query: 299 CPLAFDLCRQKTPELIDG--------VACHAVNS 324 CP A +C++ P+L + VACH +S Sbjct: 299 CPYAKAICKEVYPDLRNVGTDQNPHLVACHFADS 332 >CAC3628 [E] COG4608 ABC-type oligopeptide transport system, ATPase component Cac Clostridium acetobutylicum Length = 322 Score = 322 bits (824), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 169/327 (51%), Positives = 217/327 (66%), Gaps = 21/327 (6%) Query: 2 SGTLIEVRNLRRVFDVSKPWLNRVIEGGHLEFLKAVDGVSFDIKRGETFALVGESGSGKT 61 S LIEV+NL++ F+V GH LKAVD VSF IK+GET LVGESG GKT Sbjct: 7 SDVLIEVKNLKKYFNV-----------GHNAILKAVDDVSFTIKKGETLGLVGESGCGKT 55 Query: 62 TVARMVVGLLPPSSGEVVIDGVSMTDPRQGQARRRLRRRIQMVFQDPYASLNPRYRVAAI 121 T R V+GL + GEV DGV++ R G+A++ ++ QM+FQDPYA LNPR V I Sbjct: 56 TCGRTVLGLYQATEGEVNYDGVNIHSLR-GKAKKEFSKKAQMIFQDPYACLNPRMTVGDI 114 Query: 122 IAEPIRAFDLIQGERDIKARVGELLSLVGLHPDDGQKFPHEFSGGQRQRVAIARALASEA 181 IAE I L +GE K ++ E+L VGL+ + +FPHEFSGGQRQR+ IARALA Sbjct: 115 IAEGIDVHGLYKGEERTK-KIYEMLDHVGLNREHASRFPHEFSGGQRQRIGIARALAINP 173 Query: 182 EFIVCDEPTSALDVSVQAQILNLMRDLQDKFGLTYLFISHNLAVVRHMASRIGVMYLGRI 241 EFIVCDEP SALDVS+QAQI+NL+ LQ + GLTYLFI+H+L++V+H++ R+GVMYLG + Sbjct: 174 EFIVCDEPISALDVSIQAQIVNLLIKLQREMGLTYLFIAHDLSMVKHISDRVGVMYLGTM 233 Query: 242 VEIAEGRELFENPRMPYTKMLLGAVP---DLAMSGRQRIPVKGEIPNPIDPPQGCSFNPR 298 VE A +L+ENP PYTK L+ A+P RQRI ++GE+P+PI+P GC F R Sbjct: 234 VEFAASHDLYENPLHPYTKALMSAIPIPDPKVEKTRQRIKLEGEVPSPINPKPGCRFAGR 293 Query: 299 CPLAFDLCRQKTPELID-----GVACH 320 C A C +K PE + V+CH Sbjct: 294 CKQAKPDCFEKKPEFKEIEKGHFVSCH 320