BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0243.0006.p (231 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value TM1139 [E] COG0410 ABC-type branched-chain amino acid transport ... 233 4e-61 SP0753 [E] COG0410 ABC-type branched-chain amino acid transport ... 230 2e-60 FN1428 [E] COG0410 ABC-type branched-chain amino acid transport ... 228 9e-60 mll3974 Non COG 220 2e-57 BMEI0261 [E] COG0410 ABC-type branched-chain amino acid transpor... 220 2e-57 >TM1139 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Tma Thermotoga maritima Length = 239 Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 112/231 (48%), Positives = 159/231 (68%) Query: 1 VREVTTAYQGLVAISSVSIDVIKGEIVCVAGANGAGKSTLLKSIAGAERPRAGTVTFDGK 60 V+ + Y + AI + + V +G+IV + GANGAGK+T L +IAG R + G + F+G+ Sbjct: 8 VQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQ 67 Query: 61 RIDGQPQHVITSSGIAYVPENRRLFPRLSVRDNLRLGSYLYRSQSDRDAPLDLVFKLFPR 120 I +P HVI GIA VPE RR+FP L+V +NL +G+Y + + L+ +F LFPR Sbjct: 68 DITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDLEWIFSLFPR 127 Query: 121 LGERLDQRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVDEIFQAVKRIRDA 180 L ERL Q TLSGGEQQMLAIGRALM+RP+LLM+DEPS G+ P LV E+F+ +++I Sbjct: 128 LKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEVFEVIQKINQE 187 Query: 181 GMTVLIVEQRMAECLEIADRAYILQTGRVLMQGTAAEISGNPDVRKAYLGL 231 G T+L+VEQ L++A Y+L+TG+++++G A+E+ N VRKAYLG+ Sbjct: 188 GTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDNEMVRKAYLGV 238 >SP0753 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Spn Streptococcus pneumoniae TIGR4 Length = 236 Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 108/230 (46%), Positives = 161/230 (70%) Query: 1 VREVTTAYQGLVAISSVSIDVIKGEIVCVAGANGAGKSTLLKSIAGAERPRAGTVTFDGK 60 V ++ Y + A+ VS +V +GE+V + GANGAGK+T+L++++G RP +G + F G+ Sbjct: 6 VENLSVHYGMIQAVRDVSFEVNEGEVVSLIGANGAGKTTILRTLSGLVRPSSGKIEFLGQ 65 Query: 61 RIDGQPQHVITSSGIAYVPENRRLFPRLSVRDNLRLGSYLYRSQSDRDAPLDLVFKLFPR 120 I P I +SG++ VPE R +FP L+V +NL +G++L +++ + A L VF FPR Sbjct: 66 EIQKMPAQKIVASGLSQVPEGRHVFPGLTVMENLEMGAFLKKNREENQANLKKVFSRFPR 125 Query: 121 LGERLDQRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVDEIFQAVKRIRDA 180 L ER +Q A TLSGGEQQMLA+GRALM+ P+LL+LDEPS G+ P + EIF ++ I+ Sbjct: 126 LEERKNQDAATLSGGEQQMLAMGRALMSTPKLLLLDEPSMGLAPIFIQEIFDIIQDIQKQ 185 Query: 181 GMTVLIVEQRMAECLEIADRAYILQTGRVLMQGTAAEISGNPDVRKAYLG 230 G TVL++EQ + L I+DR Y+L+TGR+++ GT E++ + +VRKAYLG Sbjct: 186 GTTVLLIEQNANKALAISDRGYVLETGRIVLSGTGKELASSEEVRKAYLG 235 >FN1428 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Fnu Fusobacterium nucleatum Length = 237 Score = 228 bits (581), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 105/231 (45%), Positives = 165/231 (71%), Gaps = 1/231 (0%) Query: 1 VREVTTAYQGLVAISSVSIDVIKGEIVCVAGANGAGKSTLLKSIAGAERPRAGTVTFDGK 60 V+++ Y + A+ +S+++ +GE+V + GANGAGK+T L++I+G P++G++ F+GK Sbjct: 6 VKDLQVFYDNIQALKGISLEINEGEVVSIIGANGAGKTTTLQTISGLITPKSGSIIFEGK 65 Query: 61 RIDGQPQHVITSSGIAYVPENRRLFPRLSVRDNLRLGSYLYR-SQSDRDAPLDLVFKLFP 119 + + H I GIA VPE RR+F +L+V+DNL+LG + + S ++ +K+FP Sbjct: 66 NLLKEKAHNICKLGIAQVPEGRRIFSKLAVKDNLKLGQFTVKDSAEKKEEDRANFYKVFP 125 Query: 120 RLGERLDQRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVDEIFQAVKRIRD 179 R+ ER +Q A TLSGGEQQMLA+GRALM+RP+LL+LDEPS G+ P V EIF+ +K++++ Sbjct: 126 RMSERKNQLAGTLSGGEQQMLAMGRALMSRPKLLILDEPSMGLSPLFVKEIFEVIKQLKE 185 Query: 180 AGMTVLIVEQRMAECLEIADRAYILQTGRVLMQGTAAEISGNPDVRKAYLG 230 G T+L+VEQ L I+DRAY+++TG ++++G A ++ N V+KAYLG Sbjct: 186 KGTTILLVEQNAKMALSISDRAYVIETGEIVLEGKAEDLLYNDRVKKAYLG 236 >mll3974 Non COG Length = 242 Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 115/230 (50%), Positives = 154/230 (66%), Gaps = 2/230 (0%) Query: 1 VREVTTAYQGLVAISSVSIDVIKGEIVCVAGANGAGKSTLLKSIAGAERPRAGTVTFDGK 60 ++ V T Y + A++ V + V +GEIV + GANGAGKSTL+ +I GA R R GT+TF G Sbjct: 9 IKGVETYYGNIRALNGVDVTVKEGEIVALIGANGAGKSTLMMTIFGAPRARTGTITFAGT 68 Query: 61 RIDGQPQHVITSSGIAYVPENRRLFPRLSVRDNLRLGSYLYRSQSDRDAPLDLVFKLFPR 120 I P H I IA PE RR+FPR++V +NL++G+ L + D ++ VF LFPR Sbjct: 69 DITQLPTHEIARMRIAQSPEGRRIFPRMTVMENLQMGASL-DNLKHYDEDVEKVFTLFPR 127 Query: 121 LGERLDQRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVDEIFQAVKRI-RD 179 L ER+ QR TLSGGEQQML+IGRALM RP+LL+LDEPS G+ P +V +IF A++ + R Sbjct: 128 LKERIAQRGGTLSGGEQQMLSIGRALMARPKLLLLDEPSLGLAPLIVKQIFDAIRELNRT 187 Query: 180 AGMTVLIVEQRMAECLEIADRAYILQTGRVLMQGTAAEISGNPDVRKAYL 229 G+TV +VEQ L++A R Y++ G V M GT E+ NP+VR AYL Sbjct: 188 QGLTVFLVEQNAFGALKLATRGYVMVNGNVTMSGTGKELLANPEVRAAYL 237 >BMEI0261 [E] COG0410 ABC-type branched-chain amino acid transport systems, ATPase component Bme Brucella melitensis Length = 249 Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 113/230 (49%), Positives = 156/230 (67%), Gaps = 2/230 (0%) Query: 1 VREVTTAYQGLVAISSVSIDVIKGEIVCVAGANGAGKSTLLKSIAGAERPRAGTVTFDGK 60 V +V T Y + A+ + + V +GEIV + GANGAGKSTL+ +I G+ R R G + F+GK Sbjct: 16 VEKVETYYGNICALKGIDMTVDEGEIVALIGANGAGKSTLMMTIFGSPRARTGRILFNGK 75 Query: 61 RIDGQPQHVITSSGIAYVPENRRLFPRLSVRDNLRLGSYLYRSQSDRDAPLDLVFKLFPR 120 I P H I IA PE RR+FPR++V +NL++G+ L +Q D + L+F LFPR Sbjct: 76 DITSMPPHEIAKLRIAQSPEGRRIFPRMTVLENLQMGASL-DNQQYFDEDVKLMFDLFPR 134 Query: 121 LGERLDQRAETLSGGEQQMLAIGRALMTRPRLLMLDEPSQGIMPKLVDEIFQAVKRI-RD 179 L ER++QR TLSGGEQQMLAI RALM RP+LL+LDEPS G+ P +V +IF+A+K + R Sbjct: 135 LKERINQRGGTLSGGEQQMLAIARALMVRPKLLLLDEPSLGLAPLIVKQIFEAIKELNRT 194 Query: 180 AGMTVLIVEQRMAECLEIADRAYILQTGRVLMQGTAAEISGNPDVRKAYL 229 G+TV +VEQ L++ADR Y++ G + M G+ E+ +P+VR AYL Sbjct: 195 QGLTVFLVEQNAFGALKLADRGYVMVNGSITMSGSGRELLSDPEVRAAYL 244