BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0242.0029.p (258 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value CAC0112 [E] COG1126 ABC-type polar amino acid transport system, ... 270 2e-72 AF0680 [E] COG1126 ABC-type polar amino acid transport system, A... 270 2e-72 BH1463 [E] COG1126 ABC-type polar amino acid transport system, A... 270 3e-72 BS_yqiZ [E] COG1126 ABC-type polar amino acid transport system, ... 268 7e-72 lin0841 [E] COG1126 ABC-type polar amino acid transport system, ... 266 2e-71 >CAC0112 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Cac Clostridium acetobutylicum Length = 245 Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 130/236 (55%), Positives = 170/236 (72%), Gaps = 6/236 (2%) Query: 20 KRFGAHTVLNGVDLALGTGQSTCIIGPSGSGKTTLLRCMALLEVPSDGRVVMEGATVSQA 79 K +G++ VL ++L + + CIIGPSGSGK+TLLRCM LE + G+++++G +S Sbjct: 14 KSYGSNEVLKEINLTIDRSEVVCIIGPSGSGKSTLLRCMNRLEEITAGQLMIDGKDIS-- 71 Query: 80 RPSSDVRLAARKVRPEIGMVFQQFNLWPHMTVLGNIIEAPMRVRGVSRDEAVVTAERLLQ 139 D + K+R +GMVFQ FNL+PH++VL NI AP+ + +S++EA TA +LL Sbjct: 72 ----DKNINIDKLRENVGMVFQHFNLFPHLSVLKNITFAPIELNKMSKEEAEKTAFKLLD 127 Query: 140 KVGMEAKRDAYPARLSGGQQQRVAIARALAMQPKILLFDEPTSALDPELRREVLQVMRTL 199 KVG+ K + YP +LSGGQ+QRVAIARALAM P I+LFDEPTSALDPE+ EVL VM+ L Sbjct: 128 KVGLNDKANTYPDKLSGGQKQRVAIARALAMNPDIMLFDEPTSALDPEMVGEVLGVMKDL 187 Query: 200 ALEGMTMLVVTHEMGFARRVASHVVFMDEGMIVEHGTPAAFFERPTTERAKRFLNQ 255 A EGMTM+VVTHEMGFAR VA V+FM +G IVE GTP F+ PT +R K FLN+ Sbjct: 188 AKEGMTMVVVTHEMGFAREVADRVIFMADGYIVEQGTPDDIFKNPTQDRTKDFLNK 243 >AF0680 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Afu Archaeoglobus fulgidus Length = 242 Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 130/235 (55%), Positives = 171/235 (72%), Gaps = 6/235 (2%) Query: 20 KRFGAHTVLNGVDLALGTGQSTCIIGPSGSGKTTLLRCMALLEVPSDGRVVMEGATVSQA 79 KRFG VL GV + + G+ IIGPSGSGK+TLLRC+ LE P+ G+++++G ++ + Sbjct: 11 KRFGELEVLKGVTMKVEKGEVVVIIGPSGSGKSTLLRCINRLEEPTSGKILLDGVDITNS 70 Query: 80 RPSSDVRLAARKVRPEIGMVFQQFNLWPHMTVLGNIIEAPMRVRGVSRDEAVVTAERLLQ 139 + + KVR IG+VFQQFNL+PH+T L N+ AP++++ +S+ EA RLL+ Sbjct: 71 K------IDINKVRQRIGIVFQQFNLFPHLTALQNVTLAPIKIKKMSKREAEELGMRLLE 124 Query: 140 KVGMEAKRDAYPARLSGGQQQRVAIARALAMQPKILLFDEPTSALDPELRREVLQVMRTL 199 KVG+E K D YPA+LSGGQQQRVAIARALAM P+++LFDE TSALDPEL +EVL VM+ L Sbjct: 125 KVGLEDKADYYPAQLSGGQQQRVAIARALAMNPEVMLFDEVTSALDPELVKEVLDVMKQL 184 Query: 200 ALEGMTMLVVTHEMGFARRVASHVVFMDEGMIVEHGTPAAFFERPTTERAKRFLN 254 A +GMTM+VVTHEMGFAR V V+FMD G+IVE G P F P ER ++FL+ Sbjct: 185 ARDGMTMVVVTHEMGFAREVGDRVIFMDGGVIVEEGKPEQIFSNPKHERTRKFLS 239 >BH1463 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Bha Bacillus halodurans Length = 240 Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust. Identities = 130/236 (55%), Positives = 174/236 (73%), Gaps = 6/236 (2%) Query: 20 KRFGAHTVLNGVDLALGTGQSTCIIGPSGSGKTTLLRCMALLEVPSDGRVVMEGATVSQA 79 K FG+ VL G+ + G +IGPSGSGK+T LRC+ LLEVP+ G V ++ ++ Sbjct: 9 KSFGSLEVLKGITTEIQKGDVVAVIGPSGSGKSTFLRCLNLLEVPTSGHVWIDDEEITH- 67 Query: 80 RPSSDVRLAARKVRPEIGMVFQQFNLWPHMTVLGNIIEAPMRVRGVSRDEAVVTAERLLQ 139 P ++V K+R +IGMVFQ F+L+PHMTV+ N+ APM+V+GVS+ EA+ E LLQ Sbjct: 68 -PKTNVG----KLRTKIGMVFQHFHLFPHMTVMENLTFAPMKVKGVSKAEAIAKGESLLQ 122 Query: 140 KVGMEAKRDAYPARLSGGQQQRVAIARALAMQPKILLFDEPTSALDPELRREVLQVMRTL 199 KVG+ KRD YP+RLSGGQ+QRVAIARALAM P+++LFDEPTSALDPE+ +EVL VM+ L Sbjct: 123 KVGLLEKRDEYPSRLSGGQKQRVAIARALAMDPEVMLFDEPTSALDPEMVKEVLAVMKDL 182 Query: 200 ALEGMTMLVVTHEMGFARRVASHVVFMDEGMIVEHGTPAAFFERPTTERAKRFLNQ 255 A GMTM++VTHEMGFA+ VA V+F+D+G+++E P FF P +ERA+ FL + Sbjct: 183 AETGMTMVIVTHEMGFAKEVADRVLFLDQGILLEDLPPKQFFAAPKSERARDFLEK 238 >BS_yqiZ [E] COG1126 ABC-type polar amino acid transport system, ATPase component Bsu Bacillus subtilis Length = 240 Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 129/244 (52%), Positives = 171/244 (70%), Gaps = 6/244 (2%) Query: 12 VLAAEAVVKRFGAHTVLNGVDLALGTGQSTCIIGPSGSGKTTLLRCMALLEVPSDGRVVM 71 ++ E + K FG H VL + + G+ +IGPSGSGK+T LRC+ LLE P+ G + + Sbjct: 1 MIKVEKLSKSFGKHEVLKNISTTIAEGEVVAVIGPSGSGKSTFLRCLNLLEKPNGGTITI 60 Query: 72 EGATVSQARPSSDVRLAARKVRPEIGMVFQQFNLWPHMTVLGNIIEAPMRVRGVSRDEAV 131 + +++ + ++ KVR IGMVFQ F+L+PH TVL NI+ AP+ V+ S+ A Sbjct: 61 KDTEITKPKTNT------LKVRENIGMVFQHFHLFPHKTVLENIMYAPVNVKKESKQAAQ 114 Query: 132 VTAERLLQKVGMEAKRDAYPARLSGGQQQRVAIARALAMQPKILLFDEPTSALDPELRRE 191 AE LL+KVG+ KR+ YP RLSGGQ+QRVAIARALAM P I+LFDEPTSALDPE+ +E Sbjct: 115 EKAEDLLRKVGLFEKRNDYPNRLSGGQKQRVAIARALAMNPDIMLFDEPTSALDPEMVKE 174 Query: 192 VLQVMRTLALEGMTMLVVTHEMGFARRVASHVVFMDEGMIVEHGTPAAFFERPTTERAKR 251 VLQVM+ L GMTM++VTHEMGFA+ VA V+FMD+GMIVE G P FF P ++RA+ Sbjct: 175 VLQVMKELVETGMTMVIVTHEMGFAKEVADRVLFMDQGMIVEDGNPKEFFMSPKSKRAQD 234 Query: 252 FLNQ 255 FL + Sbjct: 235 FLEK 238 >lin0841 [E] COG1126 ABC-type polar amino acid transport system, ATPase component Lin Listeria innocua Length = 242 Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 129/243 (53%), Positives = 170/243 (69%), Gaps = 6/243 (2%) Query: 13 LAAEAVVKRFGAHTVLNGVDLALGTGQSTCIIGPSGSGKTTLLRCMALLEVPSDGRVVME 72 L + K FGA+ VL G+D+ + G+ C+IGPSGSGK+T LRCM LE + G VV++ Sbjct: 4 LKVTGLKKSFGANEVLKGIDIEVKEGEVVCVIGPSGSGKSTFLRCMNNLEEITAGEVVVD 63 Query: 73 GATVSQARPSSDVRLAARKVRPEIGMVFQQFNLWPHMTVLGNIIEAPMRVRGVSRDEAVV 132 ++ D ++ KVR IGMVFQ FNL+PH++VL NI AP+ ++ + ++ A Sbjct: 64 DFNIT------DKKVDINKVRENIGMVFQHFNLFPHLSVLENITLAPVELKKMDKEAAKS 117 Query: 133 TAERLLQKVGMEAKRDAYPARLSGGQQQRVAIARALAMQPKILLFDEPTSALDPELRREV 192 A RLL++VG++ K D +P +LSGGQ+QRVAIARALAM P I+LFDEPTSALDPE+ EV Sbjct: 118 NALRLLEQVGLKEKADEFPNQLSGGQKQRVAIARALAMDPDIMLFDEPTSALDPEMVGEV 177 Query: 193 LQVMRTLALEGMTMLVVTHEMGFARRVASHVVFMDEGMIVEHGTPAAFFERPTTERAKRF 252 L VM+ LA +GMTM++VTHEMGFAR V V+FMD G IVE G PA F+ PT ER F Sbjct: 178 LGVMKELAKDGMTMMIVTHEMGFAREVGDRVIFMDGGYIVEEGKPADIFDNPTNERTISF 237 Query: 253 LNQ 255 L++ Sbjct: 238 LDK 240