BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0242.0021.p (593 letters) Database: COGmodified 192,987 sequences; 59,019,183 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BMEII0691 [E] COG4166 ABC-type oligopeptide transport system, pe... 585 e-166 SMc00951 [E] COG4166 ABC-type oligopeptide transport system, per... 575 e-163 mlr0514 [E] COG4166 ABC-type oligopeptide transport system, peri... 525 e-148 AGc3261 [E] COG4166 ABC-type oligopeptide transport system, peri... 518 e-146 PA1810 [E] COG4166 ABC-type oligopeptide transport system, perip... 469 e-132 >BMEII0691 [E] COG4166 ABC-type oligopeptide transport system, periplasmic component Bme Brucella melitensis Length = 614 Score = 585 bits (1507), Expect = e-166, Method: Compositional matrix adjust. Identities = 296/592 (50%), Positives = 386/592 (65%), Gaps = 10/592 (1%) Query: 3 GPAPAAAAES----HAIAMHGDPALPPDFAHLPYANPDAPKGGRLIQGVIGTFDSLNPLI 58 G PA AA +A++MHGD ALP D+ H PY NPDAPK G L GV+GTFDSLNP + Sbjct: 22 GALPARAANETAPDYALSMHGDVALPADYTHFPYTNPDAPKKGSLTVGVVGTFDSLNPFV 81 Query: 59 IRGVPVQQVRGY--GYERGYVYESLMARGNNEPFTLYGLLARSVETDDARSYVTFHIDPR 116 ++ + Y G VY++LM R +EPFTLY LLA V D R +V F ++P+ Sbjct: 82 LKSMRTTARGLYNDGEFGNMVYQTLMLRSRDEPFTLYSLLAEKVAIDPERKWVEFTLNPK 141 Query: 117 ARFSDGRPVLADDVLFSLALLRDHGRPMHRQYYSKVAKAEALDPLTVRFDFGGVADRELP 176 A++SDG+PV DDVLF+ +L + GRP + S+VAK E +VRF F +DRE P Sbjct: 142 AKWSDGQPVTVDDVLFTYDILTEKGRPPYNSRMSRVAKIEKTGERSVRFTFNEKSDREFP 201 Query: 177 -LILGLMPILPRHAIDPEKFEETTLAPPIGSGPYRVTAVKPGASVTFTQDPNYWGRDLPI 235 LI G MP+LP+HAI+ + F +TL PPIGSGPY V +V+PG + + ++P+YWG+DLP Sbjct: 202 MLIAGSMPVLPKHAINRDTFGNSTLEPPIGSGPYVVASVQPGQRIVYKRNPDYWGKDLPS 261 Query: 236 NRGLWNFDEIRLDYYREANGMFEAFKRGLYDFRTETEPLRWHDGYDFPAARNGEVIRDTI 295 RG NFD+I ++YYR +FE+FK+G+ D E P+RW YDFPA G+VI+DT Sbjct: 262 QRGFNNFDKISIEYYRNETSLFESFKKGILDIFIEGNPIRWEKLYDFPAVEQGKVIKDTF 321 Query: 296 KIGTPRPSEFLVFNSRRPKFADLRVRQALAMLFDFEWVNRNYYFGLFSRAGGFFAGSDLS 355 + GTP VFN+RRP FAD RVRQAL +LFDFEW N N + G + R F+ GS LS Sbjct: 322 EKGTPADMLGFVFNTRRPIFADRRVRQALGLLFDFEWANSNLFAGQYRRTQSFWEGSQLS 381 Query: 356 AYGRPADDRERELLKPYLSHIQPEILDGRYRLPVTDGSGRDRSLLRNALALLAEAGYAL- 414 + GRPAD RERELL P+ ++ ++++G + PVTDGSG DR + A LL++AG+ Sbjct: 382 SVGRPADARERELLAPFPGAVREDVMNGTWHPPVTDGSGHDRVPAKKAYDLLSQAGFQFK 441 Query: 415 DGTVLKQRSTGTPLRIEILVTTREHERIALAYQRDLKRAGIEAVVRVVDAVQFEQRRVGY 474 DG + TG P EI+ + + E+IALAYQR+L R GI + VD Q++QR + Sbjct: 442 DGMAID--PTGKPFAFEIMTRSPDEEKIALAYQRNLSRLGIAVEIHTVDDAQYQQRLQTF 499 Query: 475 DFDMIPIRWDQSLSPGNEQWFYWSSQAADVPGTRNYMGARDPAIDAMIAALLAARERPAF 534 D+DMI SLSPGNEQW W S + DV G+ N+ G DPA+DAMI ALLAAR R F Sbjct: 500 DYDMILGALASSLSPGNEQWLRWGSASRDVQGSFNFAGVADPAVDAMIEALLAARNRADF 559 Query: 535 VSAVRALDRALMSGCYAIPLFNLGEQWIARWNRIERPSTTALTGYLPETWWQ 586 VSAVRALDR L+SG Y +PL++L QW+ARW+RIE P T L+GY WW Sbjct: 560 VSAVRALDRVLISGDYYVPLYHLPYQWVARWDRIEHPQKTPLSGYQLPAWWH 611 >SMc00951 [E] COG4166 ABC-type oligopeptide transport system, periplasmic component Sme Sinorhizobium meliloti Length = 604 Score = 575 bits (1481), Expect = e-163, Method: Compositional matrix adjust. Identities = 290/585 (49%), Positives = 390/585 (66%), Gaps = 8/585 (1%) Query: 7 AAAAESHAIAMHGDPALPPDFAHLPYANPDAPKGGRLIQGVIGTFDSLNPLIIRGVPVQQ 66 A AA HAIAMHGDPALP DF H PY NP KGG++ GV+GTFDSLNP I++ + Sbjct: 21 ALAAPVHAIAMHGDPALPADFKHFPYVNPQVKKGGKIAYGVVGTFDSLNPFILKSMRTT- 79 Query: 67 VRGYGYERGY---VYESLMARGNNEPFTLYGLLARSVETDDARSYVTFHIDPRARFSDGR 123 RG ++ G+ VYESLM R +EPFT+YGLLA +VE DD R+++ F+++P+AR++DGR Sbjct: 80 ARGM-WDPGFGNLVYESLMQRSQDEPFTMYGLLAETVEWDDDRTFIQFNLNPKARWADGR 138 Query: 124 PVLADDVLFSLALLRDHGRPMHRQYYSKVAKAEALDPLTVRFDFGGVADRELPLILGLMP 183 PV A+DV+F+ LLRD GR SKVAK E + +VRF F ADRE+PL+LGL P Sbjct: 139 PVTAEDVIFTFELLRDKGRAPFSNRLSKVAKMEKVGERSVRFTFTEEADREIPLLLGLSP 198 Query: 184 ILPRHAIDPEKFEETTLAPPIGSGPYRVTAVKPGASVTFTQDPNYWGRDLPINRGLWNFD 243 +LP+HAI+ E F+ T+L PP+GSGPYRV V+PG + + ++P+YW +DLP GL N+D Sbjct: 199 VLPKHAINVETFDRTSLEPPLGSGPYRVAEVRPGERIVYRRNPDYWAKDLPSKVGLDNYD 258 Query: 244 EIRLDYYREANGMFEAFKRGLYDFRTETEPLRWHDGYDFPAARNGEVIRDTIKIGTPRPS 303 EI ++Y+ + N +FEAFK+G+ D E +W YDFPA R+G VI++T K TP Sbjct: 259 EISVEYFLQENTLFEAFKKGVVDIYAEGSATKWARAYDFPAVRSGNVIKETFKPKTPSGM 318 Query: 304 EFLVFNSRRPKFADLRVRQALAMLFDFEWVNRNYYFGLFSRAGGFFAGSDLSAYGRPADD 363 VFN+RRP F ++++RQ LA++FDFEWVN+N + G ++R ++ S LS G AD+ Sbjct: 319 LGFVFNTRRPMFDNIKLRQGLALVFDFEWVNKNLFDGAYTRTQSYWQNSSLSFLGVAADN 378 Query: 364 RERELLKPYLSHIQPEILDGRYRLPVTDGSGRDRSLLRNALALLAEAGYAL-DGTVLKQR 422 RE +L+ I P ILDG YRLPVTDGSGRDR++LR A+ LL EAGY++ DG ++ + Sbjct: 379 RELDLMGDVRERINPAILDGSYRLPVTDGSGRDRNVLREAVTLLREAGYSIKDGKMVDAK 438 Query: 423 STGTPLRIEILVTTREHERIALAYQRDLKRAGIEAVVRVVDAVQFEQRRVGYDFDMIPIR 482 GTPL EI+ E++ALAYQR L GI A VR VD Q++ R +D+D+I Sbjct: 439 --GTPLAFEIMSQNAGQEKVALAYQRFLAPLGIAARVRTVDDSQYQLRSQSFDYDVIIKS 496 Query: 483 WDQSLSPGNEQWFYWSSQAADVPGTRNYMGARDPAIDAMIAALLAARERPAFVSAVRALD 542 + SLSPG EQ WSSQ D G+ N+ G D +D +I +L AR F +AVRA D Sbjct: 497 FPSSLSPGLEQINRWSSQTRDRQGSDNFAGVADKDVDKLINNILQARNPEDFTAAVRAHD 556 Query: 543 RALMSGCYAIPLFNLGEQWIARWNRIERPSTTALTGYLPETWWQK 587 R L++ Y +PL++L QWIARW I RP+T L GY +WW + Sbjct: 557 RLLVNNSYLVPLYHLDAQWIARWKHIGRPTTVPLYGYQLPSWWDE 601 >mlr0514 [E] COG4166 ABC-type oligopeptide transport system, periplasmic component Mlo Mesorhizobium loti Length = 606 Score = 525 bits (1351), Expect = e-148, Method: Compositional matrix adjust. Identities = 266/594 (44%), Positives = 371/594 (62%), Gaps = 14/594 (2%) Query: 4 PAPAAAAESHAIAMHGDPALPPDFAHLPYANPDAPKGGRLIQGVIGTFDSLNPLIIRGVP 63 P PA + HAIAM G+PALPPD+ H Y NPDAPKGG + V+G+FD+LNP I++ + Sbjct: 19 PRPAMSEPKHAIAMQGEPALPPDYTHFDYVNPDAPKGGSITYCVVGSFDNLNPFILKSLR 78 Query: 64 VQQVRG-----YGYERGYVYESLMARGNNEPFTLYGLLARSVETDDARSYVTFHIDPRAR 118 RG YG V+E LM R +E F+LYGLLA S + D R + FH++P A+ Sbjct: 79 TT-ARGMMDLTYG---NLVFEPLMQRNYDEAFSLYGLLADSADMDSERKSIEFHLNPNAK 134 Query: 119 FSDGRPVLADDVLFSLALLRDHGRPMHRQYYSKVAKAEALDPLTVRFDFGGVADRELPLI 178 +SDG PV +DVLF+ + D GRP + S +AK E +VRF F A+RE P+I Sbjct: 135 WSDGEPVTPEDVLFTYDVFTDKGRPPYNARMSLIAKLEKTGDHSVRFTFNDKANRETPMI 194 Query: 179 LGLMPILPRHAIDPEKFEETTLAPPIGSGPYRVTAVKPGASVTFTQDPNYWGRDLPINRG 238 + L PILP+HA D E F++TTL P IGSGPY + V PG + F ++P+YWG+D+P RG Sbjct: 195 IALTPILPKHAFDKETFDKTTLKPLIGSGPYTIAQVAPGQRIVFKRNPDYWGKDVPAKRG 254 Query: 239 LWNFDEIRLDYYREANGMFEAFKRGLYDFRTETEPLRWHDGYDFPAARNGEVIRDTIKIG 298 N+ +I ++Y+ AN EAFK+GL + +P++ DFPA GEV+ +T G Sbjct: 255 FDNYGQITIEYFLNANAKLEAFKKGLCAIDDDGDPVKRERDLDFPAFHRGEVVSETFDTG 314 Query: 299 TPRPSEFLVFNSRRPKFADLRVRQALAMLFDFEWVNRNYYFGLFSRAGGFFAGSDLSAYG 358 P +FN+R PKF++ VR+AL ML+DFEW N+N + G ++R ++ S+LSA G Sbjct: 315 IPPVVTGFLFNTRLPKFSNPVVRRALGMLYDFEWANKNLFGGKYTRTMSYWQNSELSALG 374 Query: 359 RPADDRERELLKPYLSHIQPEILDGRYRLPVTDGSGRDRSLLRNALALLAEAGYAL-DGT 417 PADDRE+ LL PY + P+++DG ++ PVTDGSG+DR +L+ A LL GY + DGT Sbjct: 375 HPADDREKALLAPYPGRVPPDVMDGTWKPPVTDGSGQDRKVLKAAFDLLKSIGYHVQDGT 434 Query: 418 VLKQRSTGTPLRIEILVTTREHERIALAYQRDLKRAGIEAVVRVVDAVQFEQRRVGYDFD 477 +L G P EIL +++ ER+A YQR L++ GI +R +D Q + R+ +DF+ Sbjct: 435 MLD--PDGKPFGFEILTASQDEERLAGIYQRTLEKIGINVSIRSLDGDQIQSRKQRFDFE 492 Query: 478 MI--PIRWDQSLSPGNEQWFYWSSQAADVPGTRNYMGARDPAIDAMIAALLAARERPAFV 535 + ++ SLSPG EQ WSS+AA G+ N G DPA+DA I A+L AR + +V Sbjct: 493 ALIGSSGFNNSLSPGFEQLGRWSSEAAKAEGSFNLAGVADPAVDAAIEAMLRARSKEDYV 552 Query: 536 SAVRALDRALMSGCYAIPLFNLGEQWIARWNRIERPSTTALTGYLPETWWQKPG 589 +AVR LDR L+SG Y +P+ +QW+A WN +E P T + GY TWW+KP Sbjct: 553 AAVRVLDRLLISGNYMVPMQYNTQQWLAYWNYLEHPKKTPIFGYQLPTWWRKPN 606 >AGc3261 [E] COG4166 ABC-type oligopeptide transport system, periplasmic component Atu Agrobacterium tumefaciens strain C58 (Cereon) Length = 641 Score = 518 bits (1333), Expect = e-146, Method: Compositional matrix adjust. Identities = 270/592 (45%), Positives = 364/592 (61%), Gaps = 11/592 (1%) Query: 4 PAPAAAAES-HAIAMHGDPALPPDFAHLPYANPDAPKGGRLIQGVIGTFDSLNPLIIRGV 62 PA A A+ H I+MHG P LP DF H PY NPD KGGR+ GV+GTFDSLNP +++G+ Sbjct: 46 PAGTALAQPLHGISMHGTPELPADFRHFPYVNPDVKKGGRISYGVVGTFDSLNPFVLKGM 105 Query: 63 PVQQVRGYGYERG-YVYESLMARGNNEPFTLYGLLARSVETDDARSYVTFHIDPRARFSD 121 + E G +YESLM R ++EPF+LYGLLA +VE DD RS++ F+I+PRA++SD Sbjct: 106 RTTARGVWDPEFGNLLYESLMLRSSDEPFSLYGLLAETVEWDDERSFIQFNINPRAKWSD 165 Query: 122 GRPVLADDVLFSLALLRDHGRPMHRQYYSKVAKAEALDPLTVRFDFGGVADRELPLILGL 181 G+PV DDV+F+ +LL++ GRP VAK E + VRF F A+RE PLIL Sbjct: 166 GKPVTPDDVIFTFSLLKEKGRPPFNSRLDGVAKMEKVGDRGVRFTFNDKANRETPLILAS 225 Query: 182 -MPILPRHAIDPEKFEETTLAPPIGSGPYRVTAVKPGASVTFTQDPNYWGRDLPINRGLW 240 PILP+HAIDPEKFE+ L P +GSGPYR+ ++PG + + ++P+YWG+D+P G Sbjct: 226 STPILPKHAIDPEKFEQAGLGPVVGSGPYRIKTLRPGERIIWERNPDYWGKDIPGKVGFD 285 Query: 241 NFDEIRLDYYREANGMFEAFKRGLYDFRTETEPL-------RWHDGYDFPAARNGEVIRD 293 N+DEI + Y+ + MFEAFK+G D E + + W Y+FPA G++++D Sbjct: 286 NYDEISVTYFLQVTTMFEAFKKGDIDIYPEGDAINGTSDTSHWGQAYNFPAVHRGDIVKD 345 Query: 294 TIKIGTPRPSEFLVFNSRRPKFADLRVRQALAMLFDFEWVNRNYYFGLFSRAGGFFAGSD 353 + P LVFN+RR FAD +VR+ L+ DFEW+NRN G F R ++ S Sbjct: 346 VFQPRLPTGMFGLVFNTRRATFADEKVREGLSYALDFEWLNRNILGGSFKRTQSYWQNSP 405 Query: 354 LSAYGRPADDRERELLKPYLSHIQPEILDGRYRLPVTDGSGRDRSLLRNALALLAEAGYA 413 L AYG AD+RE LL + E+L G Y +P TDG+G DR +L+ A+ L EAGY+ Sbjct: 406 LGAYGNAADERELALLGDAAKTMPAELLAGTYAMPTTDGTGADRKVLKLAVDKLKEAGYS 465 Query: 414 LDGTVLKQRSTGTPLRIEILVTTREHERIALAYQRDLKRAGIEAVVRVVDAVQFEQRRVG 473 + + + G L EI+ ERIALAYQR L G+ +R VD Q++ R Sbjct: 466 IKNGKMSD-ANGRQLAFEIMTQNPAQERIALAYQRSLNLIGVAMGIRSVDDGQYQARSNS 524 Query: 474 YDFDMIPIRWDQSLSPGNEQWFYWSSQAADVPGTRNYMGARDPAIDAMIAALLAARERPA 533 +D+DMI SLSPG EQ W+S + D G+ NY G +P ID MI ALL AR Sbjct: 525 FDYDMIIRSLPSSLSPGMEQLNRWNSLSRDAQGSFNYAGVANPDIDRMIEALLQARSTED 584 Query: 534 FVSAVRALDRALMSGCYAIPLFNLGEQWIARWNRIERPSTTALTGYLPETWW 585 F +AVRA DR L++G Y IPL+ +G QW+ARW I+RP T ++G +TWW Sbjct: 585 FQAAVRAYDRLLVAGHYIIPLYYIGAQWVARWKYIDRPDMTPISGNQKQTWW 636 >PA1810 [E] COG4166 ABC-type oligopeptide transport system, periplasmic component Pae Pseudomonas aeruginosa Length = 615 Score = 469 bits (1208), Expect = e-132, Method: Compositional matrix adjust. Identities = 246/579 (42%), Positives = 339/579 (58%), Gaps = 10/579 (1%) Query: 9 AAESHAIAMHGDP-ALPPDFAHLPYANPDAPKGGRLIQGVIGTFDSLNPLIIRGVPVQQV 67 AA HA+ ++ +P P DF H Y NPDAPKGG L Q G FDSLNP I +GV + Sbjct: 23 AAPKHALTLYDEPPKYPADFKHFDYVNPDAPKGGILRQADFGGFDSLNPFIGKGVSAPSL 82 Query: 68 RGYGYERGYVYESLMARGNNEPFTLYGLLARSVETDDARSYVTFHIDPRARFSDGRPVLA 127 G +Y++L + +EPFT YGLLA +E SYV F++ P+ARFSDG PV A Sbjct: 83 -------GLIYDTLAFQSQDEPFTEYGLLAEKIEKAPDNSYVRFYLRPQARFSDGTPVTA 135 Query: 128 DDVLFSLALLRDHGRPMHRQYYSKVAKAEALDPLTVRFDFGGVADRELPLILGLMPILPR 187 +DV+F+ L G PM+R YY+ V K A D L VRFDF +RELPLILG + ILP+ Sbjct: 136 EDVVFTFETLVSKGDPMYRNYYADVDKVVAEDKLRVRFDFKHAGNRELPLILGQIAILPK 195 Query: 188 HAIDPEKFEETTLAPPIGSGPYRVTAVKPGASVTFTQDPNYWGRDLPINRGLWNFDEIRL 247 H F +T + P+GSGPYR+ V PG S+++ + ++W +DLP++RGL+NFD I + Sbjct: 196 HWWADRDFSKTGMEIPVGSGPYRIAKVDPGRSISYERVKDWWAKDLPVSRGLYNFDTITI 255 Query: 248 DYYREANGMFEAFKRGLYDFRTETEPLRWHDGYDFPAARNGEVIRDTIKIGTPRPSEFLV 307 D YR+ + EAFK G YD E W GY+ PA R+G I+ +I P + Sbjct: 256 DSYRDMSVALEAFKAGQYDVNLEYSAKDWATGYESPALRDGRFIKASIHNHNPVGMQGFA 315 Query: 308 FNSRRPKFADLRVRQALAMLFDFEWVNRNYYFGLFSRAGGFFAGSDLSAYGRPADDRERE 367 FN RRP F D RVRQA+++LFDFEW N+ +F + R +F S+++A+ P+ + E + Sbjct: 316 FNIRRPVFQDRRVRQAISLLFDFEWSNKQLFFSSYKRTNSYFENSEMAAHQLPS-EAELK 374 Query: 368 LLKPYLSHIQPEILDGRYRLPVTDGSGRDRSLLRNALALLAEAGYALDGTVLKQRSTGTP 427 +L+P I E D ++ PV DGSG R R A LL EAGY ++ + G P Sbjct: 375 ILEPLRGKIPDEAFDQVFQNPVNDGSGVIREQRRKAYQLLTEAGYRIENNRMVG-PDGQP 433 Query: 428 LRIEILVTTREHERIALAYQRDLKRAGIEAVVRVVDAVQFEQRRVGYDFDMIPIRWDQSL 487 L E ++ ER+ L ++R+L GI+ +R VD QF R DFDM W QS Sbjct: 434 LSFEFMLFQANMERVILPFKRNLAELGIDMQIRRVDVSQFVNRLRSRDFDMTSATWPQSN 493 Query: 488 SPGNEQWFYWSSQAADVPGTRNYMGARDPAIDAMIAALLAARERPAFVSAVRALDRALMS 547 SPGNEQ +W S +AD G+RN++G +DPAID+++ +L+ + R + + RALDR L Sbjct: 494 SPGNEQREFWHSSSADKAGSRNFIGLKDPAIDSLVESLIQSDSRQSLIDHTRALDRVLSW 553 Query: 548 GCYAIPLFNLGEQWIARWNRIERPSTTALTGYLPETWWQ 586 G Y +P + + +A WNR RP T L + TWWQ Sbjct: 554 GYYVVPNYYVDTWRVAYWNRFGRPKVTPLYDWGLMTWWQ 592